RNA–Protein interactions for RNA: ENST00000420421.1

PMS1-207, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 3

Gene PMS1, Length 331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-207ENST00000420421 HNRNPUL2Q1KMD3 747 aaKnown RBP7.85□□□□□ -1.15
PMS1-207ENST00000420421 FBXO3Q9UK99 471 aa7.85□□□□□ -1.15
PMS1-207ENST00000420421 RRBP1Q9P2E9 1410 aaKnown RBP7.85□□□□□ -1.15
PMS1-207ENST00000420421 KIF14Q15058 1648 aa7.85□□□□□ -1.15
PMS1-207ENST00000420421 TTBK1Q5TCY1 1321 aaPredicted RBP7.84□□□□□ -1.15
PMS1-207ENST00000420421 NPM1P06748 294 aaKnown RBP eCLIP7.84□□□□□ -1.15
PMS1-207ENST00000420421 POTEDQ86YR6 584 aa7.84□□□□□ -1.15
PMS1-207ENST00000420421 NCOA2Q15596 1464 aa7.83□□□□□ -1.16
PMS1-207ENST00000420421 VSIG10Q8N0Z9 540 aa7.83□□□□□ -1.16
PMS1-207ENST00000420421 MIA2Q96PC5 1412 aa7.83□□□□□ -1.16
PMS1-207ENST00000420421 MAGI3Q5TCQ9 1506 aa7.83□□□□□ -1.16
PMS1-207ENST00000420421 ATF5Q9Y2D1 282 aaPredicted RBP7.82□□□□□ -1.16
PMS1-207ENST00000420421 CDC42BPAQ5VT25 1732 aa7.81□□□□□ -1.16
PMS1-207ENST00000420421 MYOM3Q5VTT5 1437 aa7.81□□□□□ -1.16
PMS1-207ENST00000420421 PPARGC1BQ86YN6 1023 aaKnown RBP7.81□□□□□ -1.16
PMS1-207ENST00000420421 CCNB3Q8WWL7 1395 aa7.81□□□□□ -1.16
PMS1-207ENST00000420421 MYO5CQ9NQX4 1742 aa7.81□□□□□ -1.16
PMS1-207ENST00000420421 FGD6Q6ZV73 1430 aa7.79□□□□□ -1.16
PMS1-207ENST00000420421 MAPKBP1O60336 1514 aa7.79□□□□□ -1.16
PMS1-207ENST00000420421 ARAP3Q8WWN8 1544 aa7.79□□□□□ -1.16
PMS1-207ENST00000420421 PTPN23Q9H3S7 1636 aa7.79□□□□□ -1.16
PMS1-207ENST00000420421 PCGF6Q9BYE7 350 aa7.79□□□□□ -1.16
PMS1-207ENST00000420421 PHLDB1Q86UU1 1377 aa7.79□□□□□ -1.16
PMS1-207ENST00000420421 ABCC10Q5T3U5 1492 aa7.79□□□□□ -1.16
PMS1-207ENST00000420421 CDC42BPBQ9Y5S2 1711 aa7.78□□□□□ -1.16
PMS1-207ENST00000420421 TCOF1Q13428 1488 aaKnown RBP7.78□□□□□ -1.16
PMS1-207ENST00000420421 WDR7Q9Y4E6 1490 aa7.78□□□□□ -1.16
PMS1-207ENST00000420421 PREX2Q70Z35 1606 aa7.78□□□□□ -1.16
PMS1-207ENST00000420421 ABCA9Q8IUA7 1624 aa7.78□□□□□ -1.16
PMS1-207ENST00000420421 TPRNQ4KMQ1 711 aa7.77□□□□□ -1.17
PMS1-207ENST00000420421 RSPH4AQ5TD94 716 aa7.77□□□□□ -1.17
PMS1-207ENST00000420421 GPATCH8Q9UKJ3 1502 aaKnown RBP7.77□□□□□ -1.17
PMS1-207ENST00000420421 ACIN1Q9UKV3 1341 aaKnown RBP7.77□□□□□ -1.17
PMS1-207ENST00000420421 ARID3CA6NKF2 412 aa7.76□□□□□ -1.17
PMS1-207ENST00000420421 CYB5RLQ6IPT4 315 aa7.76□□□□□ -1.17
PMS1-207ENST00000420421 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.76□□□□□ -1.17
PMS1-207ENST00000420421 ASXL2Q76L83 1435 aa7.76□□□□□ -1.17
PMS1-207ENST00000420421 PLEKHH2Q8IVE3 1493 aa7.75□□□□□ -1.17
PMS1-207ENST00000420421 CFDP1Q9UEE9 299 aaPredicted RBP7.75□□□□□ -1.17
PMS1-207ENST00000420421 GLI2P10070 1586 aa7.75□□□□□ -1.17
PMS1-207ENST00000420421 HRCP23327 699 aa7.74□□□□□ -1.17
PMS1-207ENST00000420421 PLCH2O75038 1416 aa7.74□□□□□ -1.17
PMS1-207ENST00000420421 CFAP74Q9C0B2 1584 aa7.74□□□□□ -1.17
PMS1-207ENST00000420421 TTC37Q6PGP7 1564 aa7.73□□□□□ -1.17
PMS1-207ENST00000420421 SAMD1Q6SPF0 538 aaPredicted RBP7.73□□□□□ -1.17
PMS1-207ENST00000420421 DNMT1P26358 1616 aaKnown RBP7.73□□□□□ -1.17
PMS1-207ENST00000420421 ARHGEF5Q12774 1597 aa7.72□□□□□ -1.17
PMS1-207ENST00000420421 KIAA1107Q9UPP5 1409 aa7.72□□□□□ -1.17
PMS1-207ENST00000420421 VASPP50552 380 aaPredicted RBP7.72□□□□□ -1.17
PMS1-207ENST00000420421 FAM50AQ14320 339 aaKnown RBP7.72□□□□□ -1.17
PMS1-207ENST00000420421 EFCAB2Q5VUJ9 269 aa7.72□□□□□ -1.17
PMS1-207ENST00000420421 KCNH8Q96L42 1107 aa7.72□□□□□ -1.17
PMS1-207ENST00000420421 AKNAQ7Z591 1439 aa7.71□□□□□ -1.17
PMS1-207ENST00000420421 CROCC2H7BZ55 1655 aa7.71□□□□□ -1.18
PMS1-207ENST00000420421 ADGBQ8N7X0 1667 aa7.71□□□□□ -1.18
PMS1-207ENST00000420421 ARHGAP5Q13017 1502 aa7.71□□□□□ -1.18
PMS1-207ENST00000420421 CAMSAP2Q08AD1 1489 aa7.7□□□□□ -1.18
PMS1-207ENST00000420421 DNAJC5Q9H3Z4 198 aa7.7□□□□□ -1.18
PMS1-207ENST00000420421 MAP3K4Q9Y6R4 1608 aa7.7□□□□□ -1.18
PMS1-207ENST00000420421 ROCK1Q13464 1354 aa7.7□□□□□ -1.18
PMS1-207ENST00000420421 SHANK2Q9UPX8 1470 aa7.69□□□□□ -1.18
PMS1-207ENST00000420421 SAMD9LQ8IVG5 1584 aa7.69□□□□□ -1.18
PMS1-207ENST00000420421 SPDYE4A6NLX3 237 aa7.69□□□□□ -1.18
PMS1-207ENST00000420421 TSPY4P0CV99 314 aa7.69□□□□□ -1.18
PMS1-207ENST00000420421 TSPY10P0CW01 314 aa7.69□□□□□ -1.18
PMS1-207ENST00000420421 DAPK1P53355 1430 aa7.69□□□□□ -1.18
PMS1-207ENST00000420421 CD109Q6YHK3 1445 aa7.69□□□□□ -1.18
PMS1-207ENST00000420421 KIF13AQ9H1H9 1805 aa7.68□□□□□ -1.18
PMS1-207ENST00000420421 DIP2BQ9P265 1576 aa7.68□□□□□ -1.18
PMS1-207ENST00000420421 MAST1Q9Y2H9 1570 aa7.68□□□□□ -1.18
PMS1-207ENST00000420421 GCC2Q8IWJ2 1684 aa7.68□□□□□ -1.18
PMS1-207ENST00000420421 SETD5Q9C0A6 1442 aa7.68□□□□□ -1.18
PMS1-207ENST00000420421 ADGRL2O95490 1459 aa7.68□□□□□ -1.18
PMS1-207ENST00000420421 CCDC141Q6ZP82 1450 aa7.68□□□□□ -1.18
PMS1-207ENST00000420421 NEO1Q92859 1461 aa7.68□□□□□ -1.18
PMS1-207ENST00000420421 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.67□□□□□ -1.18
PMS1-207ENST00000420421 ABCC5O15440 1437 aa7.67□□□□□ -1.18
PMS1-207ENST00000420421 FANCAO15360 1455 aa7.67□□□□□ -1.18
PMS1-207ENST00000420421 MBD5Q9P267 1494 aa7.67□□□□□ -1.18
PMS1-207ENST00000420421 ABCC1P33527 1531 aa7.67□□□□□ -1.18
PMS1-207ENST00000420421 ZNF777Q9ULD5 760 aaPredicted RBP7.66□□□□□ -1.18
PMS1-207ENST00000420421 HFM1A2PYH4 1435 aa7.66□□□□□ -1.18
PMS1-207ENST00000420421 TEX14Q8IWB6 1497 aa7.66□□□□□ -1.18
PMS1-207ENST00000420421 RTEL1-TNFRSF6BF6WH68 1400 aa7.65□□□□□ -1.18
PMS1-207ENST00000420421 PKD2Q13563 968 aa7.65□□□□□ -1.18
PMS1-207ENST00000420421 IFNLR1Q8IU57 520 aaPredicted RBP7.65□□□□□ -1.18
PMS1-207ENST00000420421 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.65□□□□□ -1.184e-6■□□□□ 11.1
PMS1-207ENST00000420421 ANKRD30AQ9BXX3 1397 aa7.65□□□□□ -1.18
PMS1-207ENST00000420421 CLSPNQ9HAW4 1339 aa7.65□□□□□ -1.18
PMS1-207ENST00000420421 KDM2AQ9Y2K7 1162 aa7.65□□□□□ -1.18
PMS1-207ENST00000420421 TSPOAP1O95153 1857 aa7.64□□□□□ -1.19
PMS1-207ENST00000420421 PLXNC1O60486 1568 aa7.64□□□□□ -1.19
PMS1-207ENST00000420421 SYCP2Q9BX26 1530 aa7.64□□□□□ -1.19
PMS1-207ENST00000420421 NCOA1Q15788 1441 aa7.64□□□□□ -1.19
PMS1-207ENST00000420421 ZNF644Q9H582 1327 aaPredicted RBP7.64□□□□□ -1.19
PMS1-207ENST00000420421 ADGRL1O94910 1474 aa7.63□□□□□ -1.19
PMS1-207ENST00000420421 PTPRKQ15262 1439 aa7.63□□□□□ -1.19
PMS1-207ENST00000420421 ZEB1P37275 1124 aaPredicted RBP7.63□□□□□ -1.19
PMS1-207ENST00000420421 ITGAEP38570 1179 aa7.63□□□□□ -1.19
PMS1-207ENST00000420421 HNRNPMP52272 730 aaKnown RBP eCLIP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms