RNA–Protein interactions for RNA: ENST00000419220.1

LINC02539-202, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2

Gene LINC02539, Length 703 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-202ENST00000419220 ATN1P54259 1190 aaPredicted RBP11□□□□□ -0.65
LINC02539-202ENST00000419220 NUP160Q12769 1436 aa10.98□□□□□ -0.65
LINC02539-202ENST00000419220 AMER1Q5JTC6 1135 aaPredicted RBP10.97□□□□□ -0.65
LINC02539-202ENST00000419220 JPH4Q96JJ6 628 aa10.96□□□□□ -0.65
LINC02539-202ENST00000419220 KIAA0586Q9BVV6 1533 aa10.95□□□□□ -0.66
LINC02539-202ENST00000419220 CLASP1Q7Z460 1538 aa10.94□□□□□ -0.66
LINC02539-202ENST00000419220 RUSC2Q8N2Y8 1516 aa10.94□□□□□ -0.66
LINC02539-202ENST00000419220 CARMIL2Q6F5E8 1435 aa10.94□□□□□ -0.66
LINC02539-202ENST00000419220 CEP170Q5SW79 1584 aa10.93□□□□□ -0.66
LINC02539-202ENST00000419220 ARHGEF11O15085 1522 aa10.92□□□□□ -0.66
LINC02539-202ENST00000419220 UBTFP17480 764 aaKnown RBP10.91□□□□□ -0.66
LINC02539-202ENST00000419220 PROM2Q8N271 834 aa10.91□□□□□ -0.66
LINC02539-202ENST00000419220 TSPYL2Q9H2G4 693 aaPredicted RBP10.91□□□□□ -0.66
LINC02539-202ENST00000419220 PRXQ9BXM0 1461 aa10.91□□□□□ -0.66
LINC02539-202ENST00000419220 TIE1P35590 1138 aa10.9□□□□□ -0.66
LINC02539-202ENST00000419220 CYB5RLQ6IPT4 315 aa10.9□□□□□ -0.66
LINC02539-202ENST00000419220 BMP2KQ9NSY1 1161 aaPredicted RBP10.9□□□□□ -0.66
LINC02539-202ENST00000419220 CCDC61Q9Y6R9 512 aa10.9□□□□□ -0.66
LINC02539-202ENST00000419220 RIMBP3CA6NJZ7 1639 aa10.9□□□□□ -0.66
LINC02539-202ENST00000419220 RIMBP3BA6NNM3 1639 aa10.9□□□□□ -0.66
LINC02539-202ENST00000419220 RIMBP3Q9UFD9 1639 aa10.9□□□□□ -0.66
LINC02539-202ENST00000419220 IQGAP2Q13576 1575 aa10.9□□□□□ -0.67
LINC02539-202ENST00000419220 POTEFA5A3E0 1075 aa10.89□□□□□ -0.67
LINC02539-202ENST00000419220 SEC24BO95487 1268 aa10.89□□□□□ -0.67
LINC02539-202ENST00000419220 FBXO3Q9UK99 471 aa10.89□□□□□ -0.67
LINC02539-202ENST00000419220 PRG4Q92954 1404 aaPredicted RBP10.89□□□□□ -0.67
LINC02539-202ENST00000419220 GOLGA3Q08378 1498 aa10.88□□□□□ -0.67
LINC02539-202ENST00000419220 KIF12Q96FN5 646 aa10.88□□□□□ -0.67
LINC02539-202ENST00000419220 CTTNBP2Q8WZ74 1663 aa10.88□□□□□ -0.67
LINC02539-202ENST00000419220 KIF21BO75037 1637 aa10.87□□□□□ -0.67
LINC02539-202ENST00000419220 SHROOM2Q13796 1616 aa10.87□□□□□ -0.67
LINC02539-202ENST00000419220 TNIKQ9UKE5 1360 aa10.83□□□□□ -0.68
LINC02539-202ENST00000419220 IER5LQ5T953 404 aa10.82□□□□□ -0.68
LINC02539-202ENST00000419220 PTPRGP23470 1445 aa10.82□□□□□ -0.68
LINC02539-202ENST00000419220 UGGT2Q9NYU1 1516 aa10.81□□□□□ -0.68
LINC02539-202ENST00000419220 ARAP1Q96P48 1450 aa10.8□□□□□ -0.68
LINC02539-202ENST00000419220 ST18O60284 1047 aa10.79□□□□□ -0.68
LINC02539-202ENST00000419220 MMRN1Q13201 1228 aa10.79□□□□□ -0.68
LINC02539-202ENST00000419220 COLQQ9Y215 455 aaPredicted RBP10.79□□□□□ -0.68
LINC02539-202ENST00000419220 VASPP50552 380 aaPredicted RBP10.78□□□□□ -0.68
LINC02539-202ENST00000419220 TTBK1Q5TCY1 1321 aaPredicted RBP10.78□□□□□ -0.68
LINC02539-202ENST00000419220 RANGAP1P46060 587 aaPredicted RBP10.77□□□□□ -0.69
LINC02539-202ENST00000419220 SLAIN1Q8ND83 568 aa10.77□□□□□ -0.69
LINC02539-202ENST00000419220 TTLL13PA6NNM8 815 aa10.76□□□□□ -0.69
LINC02539-202ENST00000419220 MAP3K13O43283 966 aa10.76□□□□□ -0.69
LINC02539-202ENST00000419220 TRPC6Q9Y210 931 aa10.76□□□□□ -0.69
LINC02539-202ENST00000419220 EFCAB5A4FU69 1503 aa10.75□□□□□ -0.69
LINC02539-202ENST00000419220 TMEM121BQ9BXQ6 578 aaPredicted RBP10.75□□□□□ -0.69
LINC02539-202ENST00000419220 KIAA0556O60303 1618 aa10.74□□□□□ -0.69
LINC02539-202ENST00000419220 SPNS2Q8IVW8 549 aa10.74□□□□□ -0.69
LINC02539-202ENST00000419220 PLEKHG5O94827 1062 aa10.73□□□□□ -0.69
LINC02539-202ENST00000419220 UACAQ9BZF9 1416 aa10.73□□□□□ -0.69
LINC02539-202ENST00000419220 DISP1Q96F81 1524 aa10.73□□□□□ -0.69
LINC02539-202ENST00000419220 ERCC6L2Q5T890 1561 aa10.73□□□□□ -0.69
LINC02539-202ENST00000419220 P3H3Q8IVL6 736 aa10.72□□□□□ -0.69
LINC02539-202ENST00000419220 TRIM35Q9UPQ4 493 aa10.71□□□□□ -0.69
LINC02539-202ENST00000419220 FMN1Q68DA7 1419 aa10.7□□□□□ -0.7
LINC02539-202ENST00000419220 SGIP1Q9BQI5 828 aa10.7□□□□□ -0.7
LINC02539-202ENST00000419220 UHRF1BP1LA0JNW5 1464 aa10.69□□□□□ -0.7
LINC02539-202ENST00000419220 SAMD9Q5K651 1589 aa10.69□□□□□ -0.7
LINC02539-202ENST00000419220 SNPHO15079 494 aa10.68□□□□□ -0.7
LINC02539-202ENST00000419220 IFNLR1Q8IU57 520 aaPredicted RBP10.68□□□□□ -0.7
LINC02539-202ENST00000419220 CDK11AQ9UQ88 783 aaPredicted RBP10.68□□□□□ -0.7
LINC02539-202ENST00000419220 ATP1B4Q9UN42 357 aaPredicted RBP10.67□□□□□ -0.7
LINC02539-202ENST00000419220 ABCC2Q92887 1545 aa10.67□□□□□ -0.7
LINC02539-202ENST00000419220 PLCG2P16885 1265 aa10.65□□□□□ -0.7
LINC02539-202ENST00000419220 CLIP1P30622 1438 aa10.65□□□□□ -0.7
LINC02539-202ENST00000419220 PLB1Q6P1J6 1458 aa10.64□□□□□ -0.71
LINC02539-202ENST00000419220 ADCY10Q96PN6 1610 aa10.63□□□□□ -0.71
LINC02539-202ENST00000419220 PLEKHD1A6NEE1 506 aa10.63□□□□□ -0.71
LINC02539-202ENST00000419220 FHOD3Q2V2M9 1422 aa10.63□□□□□ -0.71
LINC02539-202ENST00000419220 MAPKBP1O60336 1514 aa10.63□□□□□ -0.71
LINC02539-202ENST00000419220 RAPGEF6Q8TEU7 1601 aa10.62□□□□□ -0.71
LINC02539-202ENST00000419220 LOC105371045A0A1W2PR82 267 aa10.61□□□□□ -0.71
LINC02539-202ENST00000419220 RASEFQ8IZ41 740 aa10.61□□□□□ -0.71
LINC02539-202ENST00000419220 PCDHB13Q9Y5F0 798 aa10.61□□□□□ -0.71
LINC02539-202ENST00000419220 KDM5BQ9UGL1 1544 aa10.61□□□□□ -0.71
LINC02539-202ENST00000419220 ARHGAP35Q9NRY4 1499 aa10.61□□□□□ -0.71
LINC02539-202ENST00000419220 ABCA8O94911 1581 aa10.6□□□□□ -0.71
LINC02539-202ENST00000419220 FAM69CQ0P6D2 419 aa10.6□□□□□ -0.71
LINC02539-202ENST00000419220 CEP162Q5TB80 1403 aa10.58□□□□□ -0.72
LINC02539-202ENST00000419220 HECW1Q76N89 1606 aa10.58□□□□□ -0.72
LINC02539-202ENST00000419220 ZCCHC11Q5TAX3 1644 aaKnown RBP10.58□□□□□ -0.72
LINC02539-202ENST00000419220 ASXL2Q76L83 1435 aa10.58□□□□□ -0.72
LINC02539-202ENST00000419220 KCNH8Q96L42 1107 aa10.57□□□□□ -0.72
LINC02539-202ENST00000419220 ABCC10Q5T3U5 1492 aa10.56□□□□□ -0.72
LINC02539-202ENST00000419220 KLHL34Q8N239 644 aa10.56□□□□□ -0.72
LINC02539-202ENST00000419220 CCDC18Q5T9S5 1454 aa10.55□□□□□ -0.72
LINC02539-202ENST00000419220 MIER1Q8N108 512 aa10.55□□□□□ -0.72
LINC02539-202ENST00000419220 PLCD3Q8N3E9 789 aa10.55□□□□□ -0.72
LINC02539-202ENST00000419220 CASKIN1Q8WXD9 1431 aa10.55□□□□□ -0.72
LINC02539-202ENST00000419220 ATP10BO94823 1461 aa10.55□□□□□ -0.72
LINC02539-202ENST00000419220 WDR7Q9Y4E6 1490 aa10.55□□□□□ -0.72
LINC02539-202ENST00000419220 ARID3CA6NKF2 412 aa10.54□□□□□ -0.72
LINC02539-202ENST00000419220 TMEM106CQ9BVX2 250 aa10.54□□□□□ -0.72
LINC02539-202ENST00000419220 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.54□□□□□ -0.72
LINC02539-202ENST00000419220 FYCO1Q9BQS8 1478 aa10.54□□□□□ -0.72
LINC02539-202ENST00000419220 NUP153P49790 1475 aaKnown RBP10.52□□□□□ -0.73
LINC02539-202ENST00000419220 TEX14Q8IWB6 1497 aa10.52□□□□□ -0.73
LINC02539-202ENST00000419220 GLI2P10070 1586 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms