RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 G3V3G9 751 aa14.29□□□□□ -0.12
PTCH1-205ENST00000418258 DCAF8Q5TAQ9 597 aa14.29□□□□□ -0.12
PTCH1-205ENST00000418258 APBB1O00213 710 aa14.29□□□□□ -0.12
PTCH1-205ENST00000418258 HSCBQ8IWL3 235 aa14.28□□□□□ -0.12
PTCH1-205ENST00000418258 DRC7Q8IY82 874 aa14.28□□□□□ -0.12
PTCH1-205ENST00000418258 FHAD1B1AJZ9 1412 aa14.28□□□□□ -0.12
PTCH1-205ENST00000418258 KIAA1211Q6ZU35 1233 aa14.28□□□□□ -0.12
PTCH1-205ENST00000418258 CHMP3Q9Y3E7 222 aa14.27□□□□□ -0.13
PTCH1-205ENST00000418258 NAP1L5Q96NT1 182 aaPredicted RBP14.25□□□□□ -0.13
PTCH1-205ENST00000418258 TAF7LQ5H9L4 462 aa14.25□□□□□ -0.13
PTCH1-205ENST00000418258 SPRYD3Q8NCJ5 442 aa14.24□□□□□ -0.13
PTCH1-205ENST00000418258 KIAA2012Q0VF49 1180 aa14.24□□□□□ -0.13
PTCH1-205ENST00000418258 GORABQ5T7V8 394 aa14.24□□□□□ -0.13
PTCH1-205ENST00000418258 PRM3Q9NNZ6 103 aa14.23□□□□□ -0.13
PTCH1-205ENST00000418258 CHAF1AQ13111 956 aaPredicted RBP14.23□□□□□ -0.13
PTCH1-205ENST00000418258 CUX2O14529 1486 aa14.21□□□□□ -0.13
PTCH1-205ENST00000418258 PPP4R2Q9NY27 417 aa14.21□□□□□ -0.13
PTCH1-205ENST00000418258 CFAP44Q96MT7 982 aa14.21□□□□□ -0.14
PTCH1-205ENST00000418258 EID1Q9Y6B2 187 aa14.2□□□□□ -0.14
PTCH1-205ENST00000418258 SPAG9O60271 1321 aaKnown RBP14.2□□□□□ -0.14
PTCH1-205ENST00000418258 IPO8O15397 1037 aaKnown RBP14.2□□□□□ -0.14
PTCH1-205ENST00000418258 CALD1Q05682 793 aaKnown RBP14.2□□□□□ -0.14
PTCH1-205ENST00000418258 L1TD1Q5T7N2 865 aaKnown RBP14.2□□□□□ -0.14
PTCH1-205ENST00000418258 ERICH6BQ5W0A0 696 aa14.2□□□□□ -0.14
PTCH1-205ENST00000418258 CARMIL2Q6F5E8 1435 aa14.19□□□□□ -0.14
PTCH1-205ENST00000418258 B4GALNT3Q6L9W6 998 aa14.18□□□□□ -0.14
PTCH1-205ENST00000418258 ROCK2O75116 1388 aaKnown RBP14.18□□□□□ -0.14
PTCH1-205ENST00000418258 U2AF1L5P0DN76 240 aaPredicted RBP14.18□□□□□ -0.14
PTCH1-205ENST00000418258 U2AF1Q01081 240 aaKnown RBP eCLIP14.18□□□□□ -0.14
PTCH1-205ENST00000418258 AMER1Q5JTC6 1135 aaPredicted RBP14.17□□□□□ -0.14
PTCH1-205ENST00000418258 CARMIL1Q5VZK9 1371 aa14.17□□□□□ -0.14
PTCH1-205ENST00000418258 ARHGAP35Q9NRY4 1499 aa14.17□□□□□ -0.14
PTCH1-205ENST00000418258 GPATCH3Q96I76 525 aa14.17□□□□□ -0.14
PTCH1-205ENST00000418258 NOC3LQ8WTT2 800 aaKnown RBP14.17□□□□□ -0.14
PTCH1-205ENST00000418258 BAZ1AQ9NRL2 1556 aaPredicted RBP14.17□□□□□ -0.14
PTCH1-205ENST00000418258 TNIKQ9UKE5 1360 aa14.16□□□□□ -0.14
PTCH1-205ENST00000418258 KTN1Q86UP2 1357 aaKnown RBP14.16□□□□□ -0.14
PTCH1-205ENST00000418258 ITPRIPQ8IWB1 547 aa14.15□□□□□ -0.14
PTCH1-205ENST00000418258 NGDNQ8NEJ9 315 aaKnown RBP14.15□□□□□ -0.14
PTCH1-205ENST00000418258 GTF2E1P29083 439 aaPredicted RBP14.15□□□□□ -0.14
PTCH1-205ENST00000418258 FOXD1Q16676 465 aa14.15□□□□□ -0.14
PTCH1-205ENST00000418258 FRAT2O75474 233 aaPredicted RBP14.15□□□□□ -0.14
PTCH1-205ENST00000418258 MSNP26038 577 aaKnown RBP14.15□□□□□ -0.14
PTCH1-205ENST00000418258 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.15□□□□□ -0.14
PTCH1-205ENST00000418258 PKD2Q13563 968 aa14.14□□□□□ -0.15
PTCH1-205ENST00000418258 STK31Q9BXU1 1019 aa14.14□□□□□ -0.15
PTCH1-205ENST00000418258 NOP58Q9Y2X3 529 aaKnown RBP14.14□□□□□ -0.15
PTCH1-205ENST00000418258 HSP90B1P14625 803 aaKnown RBP14.13□□□□□ -0.15
PTCH1-205ENST00000418258 TRIM6-TRIM34B2RNG4 842 aa14.12□□□□□ -0.15
PTCH1-205ENST00000418258 CHMP4AQ9BY43 222 aa14.12□□□□□ -0.15
PTCH1-205ENST00000418258 NUTM2DQ5VT03 806 aaPredicted RBP14.12□□□□□ -0.15
PTCH1-205ENST00000418258 LTV1Q96GA3 475 aaPredicted RBP14.12□□□□□ -0.15
PTCH1-205ENST00000418258 RTN4Q9NQC3 1192 aaKnown RBP14.12□□□□□ -0.15
PTCH1-205ENST00000418258 EIF3AQ14152 1382 aaKnown RBP14.12□□□□□ -0.15
PTCH1-205ENST00000418258 AMPHP49418 695 aa14.12□□□□□ -0.15
PTCH1-205ENST00000418258 VPS53Q5VIR6 699 aa14.11□□□□□ -0.15
PTCH1-205ENST00000418258 NUTM2FA1L443 756 aa14.11□□□□□ -0.15
PTCH1-205ENST00000418258 MYO15BQ96JP2 1530 aa14.11□□□□□ -0.15
PTCH1-205ENST00000418258 PDE4CQ08493 712 aa14.1□□□□□ -0.15
PTCH1-205ENST00000418258 SLC4A10Q6U841 1118 aa14.1□□□□□ -0.15
PTCH1-205ENST00000418258 RASSF8Q8NHQ8 419 aa14.1□□□□□ -0.15
PTCH1-205ENST00000418258 EVA1CP58658 441 aa14.1□□□□□ -0.15
PTCH1-205ENST00000418258 EFCAB2Q5VUJ9 269 aa14.09□□□□□ -0.15
PTCH1-205ENST00000418258 KIF3BO15066 747 aa14.09□□□□□ -0.15
PTCH1-205ENST00000418258 MSH5O43196 834 aa14.09□□□□□ -0.15
PTCH1-205ENST00000418258 TERF2IPQ9NYB0 399 aa14.09□□□□□ -0.15
PTCH1-205ENST00000418258 HTATSF1O43719 755 aaKnown RBP14.08□□□□□ -0.15
PTCH1-205ENST00000418258 WASHC2CQ9Y4E1 1318 aa14.08□□□□□ -0.16
PTCH1-205ENST00000418258 AEBP2Q6ZN18 517 aaPredicted RBP14.07□□□□□ -0.16
PTCH1-205ENST00000418258 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.07□□□□□ -0.16
PTCH1-205ENST00000418258 NUP155O75694 1391 aa14.07□□□□□ -0.16
PTCH1-205ENST00000418258 CREBRFQ8IUR6 639 aa14.07□□□□□ -0.16
PTCH1-205ENST00000418258 HDAC5Q9UQL6 1122 aa14.06□□□□□ -0.16
PTCH1-205ENST00000418258 CCDC34Q96HJ3 373 aa14.06□□□□□ -0.16
PTCH1-205ENST00000418258 SETD5Q9C0A6 1442 aa14.06□□□□□ -0.16
PTCH1-205ENST00000418258 TPM4P67936 248 aa14.06□□□□□ -0.16
PTCH1-205ENST00000418258 PDS5BQ9NTI5 1447 aa14.06□□□□□ -0.16
PTCH1-205ENST00000418258 TOMM22Q9NS69 142 aa14.06□□□□□ -0.16
PTCH1-205ENST00000418258 MEX3CQ5U5Q3 659 aaKnown RBP14.05□□□□□ -0.16
PTCH1-205ENST00000418258 SMC4Q9NTJ3 1288 aa14.05□□□□□ -0.16
PTCH1-205ENST00000418258 HSPA5P11021 654 aaKnown RBP14.05□□□□□ -0.16
PTCH1-205ENST00000418258 MARCH6O60337 910 aa14.05□□□□□ -0.16
PTCH1-205ENST00000418258 RWDD1Q9H446 243 aaPredicted RBP14.04□□□□□ -0.16
PTCH1-205ENST00000418258 ANO8Q9HCE9 1232 aaPredicted RBP14.03□□□□□ -0.16
PTCH1-205ENST00000418258 HMMRO75330 724 aa14.03□□□□□ -0.16
PTCH1-205ENST00000418258 GBP4Q96PP9 640 aa14.03□□□□□ -0.16
PTCH1-205ENST00000418258 ANKRD30AQ9BXX3 1397 aa14.03□□□□□ -0.16
PTCH1-205ENST00000418258 HNRNPMP52272 730 aaKnown RBP eCLIP14.03□□□□□ -0.16
PTCH1-205ENST00000418258 SOGA1O94964 1423 aa14.02□□□□□ -0.16
PTCH1-205ENST00000418258 A0A0U1RQG5 324 aaPredicted RBP14.02□□□□□ -0.17
PTCH1-205ENST00000418258 SYAP1Q96A49 352 aaPredicted RBP14□□□□□ -0.17
PTCH1-205ENST00000418258 RCAN3Q9UKA8 241 aa14□□□□□ -0.17
PTCH1-205ENST00000418258 PRDM2Q13029 1718 aa14□□□□□ -0.17
PTCH1-205ENST00000418258 MPHOSPH9Q99550 1183 aa14□□□□□ -0.17
PTCH1-205ENST00000418258 ABCC8Q09428 1581 aa14□□□□□ -0.17
PTCH1-205ENST00000418258 PTMSP20962 102 aa13.99□□□□□ -0.17
PTCH1-205ENST00000418258 C1orf141Q5JVX7 400 aa13.99□□□□□ -0.17
PTCH1-205ENST00000418258 CCDC146Q8IYE0 955 aa13.99□□□□□ -0.17
PTCH1-205ENST00000418258 CEP89Q96ST8 783 aa13.99□□□□□ -0.17
PTCH1-205ENST00000418258 PMFBP1Q8TBY8 1022 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms