RNA–Protein interactions for RNA: ENST00000417665.5

NPHP1-204, Transcript of nephrocystin 1, humanhuman

TSL 5 BASIC

Gene NPHP1, Length 2,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-204ENST00000417665 UGGT2Q9NYU1 1516 aa8.32□□□□□ -1.08
NPHP1-204ENST00000417665 PCF11O94913 1555 aaKnown RBP8.31□□□□□ -1.08
NPHP1-204ENST00000417665 ARAP3Q8WWN8 1544 aa8.31□□□□□ -1.08
NPHP1-204ENST00000417665 KIAA0556O60303 1618 aa8.3□□□□□ -1.08
NPHP1-204ENST00000417665 CDK11AQ9UQ88 783 aaPredicted RBP8.3□□□□□ -1.08
NPHP1-204ENST00000417665 SOCS7O14512 581 aa8.29□□□□□ -1.08
NPHP1-204ENST00000417665 SALL2Q9Y467 1007 aaPredicted RBP8.29□□□□□ -1.08
NPHP1-204ENST00000417665 HNRNPUL2Q1KMD3 747 aaKnown RBP8.28□□□□□ -1.08
NPHP1-204ENST00000417665 ILDR2Q71H61 639 aa8.27□□□□□ -1.08
NPHP1-204ENST00000417665 BCORL1Q5H9F3 1711 aa8.27□□□□□ -1.09
NPHP1-204ENST00000417665 ITGAEP38570 1179 aa8.26□□□□□ -1.09
NPHP1-204ENST00000417665 ABCA8O94911 1581 aa8.26□□□□□ -1.09
NPHP1-204ENST00000417665 MADDQ8WXG6 1647 aa8.25□□□□□ -1.09
NPHP1-204ENST00000417665 PHLDB1Q86UU1 1377 aa8.25□□□□□ -1.09
NPHP1-204ENST00000417665 KCNH8Q96L42 1107 aa8.25□□□□□ -1.09
NPHP1-204ENST00000417665 CERKQ8TCT0 537 aa8.25□□□□□ -1.09
NPHP1-204ENST00000417665 DISP3Q9P2K9 1392 aa8.24□□□□□ -1.09
NPHP1-204ENST00000417665 RAPGEF2Q9Y4G8 1499 aa8.23□□□□□ -1.09
NPHP1-204ENST00000417665 DHX57Q6P158 1386 aaKnown RBP8.22□□□□□ -1.09
NPHP1-204ENST00000417665 FRMPD1Q5SYB0 1578 aa8.22□□□□□ -1.09
NPHP1-204ENST00000417665 EEA1Q15075 1411 aa8.22□□□□□ -1.09
NPHP1-204ENST00000417665 ABCA9Q8IUA7 1624 aa8.21□□□□□ -1.1
NPHP1-204ENST00000417665 RIMS1Q86UR5 1692 aaKnown RBP8.21□□□□□ -1.1
NPHP1-204ENST00000417665 NEO1Q92859 1461 aa8.21□□□□□ -1.1
NPHP1-204ENST00000417665 RAPGEF3O95398 923 aa8.21□□□□□ -1.1
NPHP1-204ENST00000417665 HSPA2P54652 639 aa8.21□□□□□ -1.1
NPHP1-204ENST00000417665 NOP58Q9Y2X3 529 aaKnown RBP8.21□□□□□ -1.1
NPHP1-204ENST00000417665 GOLGA3Q08378 1498 aa8.2□□□□□ -1.1
NPHP1-204ENST00000417665 CCER2I3L3R5 266 aa8.2□□□□□ -1.1
NPHP1-204ENST00000417665 CCDC136Q96JN2 1154 aa8.19□□□□□ -1.1
NPHP1-204ENST00000417665 ARHGEF40Q8TER5 1519 aa8.19□□□□□ -1.1
NPHP1-204ENST00000417665 RTL5Q5HYW3 569 aaPredicted RBP8.19□□□□□ -1.1
NPHP1-204ENST00000417665 ARID4BQ4LE39 1312 aaPredicted RBP8.18□□□□□ -1.1
NPHP1-204ENST00000417665 NCBP3Q53F19 620 aaKnown RBP8.18□□□□□ -1.1
NPHP1-204ENST00000417665 CTTNBP2Q8WZ74 1663 aa8.18□□□□□ -1.1
NPHP1-204ENST00000417665 ATP10BO94823 1461 aa8.18□□□□□ -1.1
NPHP1-204ENST00000417665 SPATA31D1Q6ZQQ2 1576 aa8.17□□□□□ -1.1
NPHP1-204ENST00000417665 NPM3O75607 178 aaKnown RBP8.17□□□□□ -1.1
NPHP1-204ENST00000417665 NBR1Q14596 966 aa8.16□□□□□ -1.1
NPHP1-204ENST00000417665 UBTFP17480 764 aaKnown RBP8.15□□□□□ -1.1
NPHP1-204ENST00000417665 RICTORQ6R327 1708 aa8.14□□□□□ -1.11
NPHP1-204ENST00000417665 FHOD3Q2V2M9 1422 aa8.14□□□□□ -1.11
NPHP1-204ENST00000417665 SIGLEC1Q9BZZ2 1709 aa8.14□□□□□ -1.11
NPHP1-204ENST00000417665 EIF5BO60841 1220 aaKnown RBP8.14□□□□□ -1.11
NPHP1-204ENST00000417665 IL27Q8NEV9 243 aa8.14□□□□□ -1.11
NPHP1-204ENST00000417665 PPP4R2Q9NY27 417 aa8.14□□□□□ -1.11
NPHP1-204ENST00000417665 POGZQ7Z3K3 1410 aa8.14□□□□□ -1.11
NPHP1-204ENST00000417665 TTC37Q6PGP7 1564 aa8.14□□□□□ -1.11
NPHP1-204ENST00000417665 FANCAO15360 1455 aa8.13□□□□□ -1.11
NPHP1-204ENST00000417665 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.13□□□□□ -1.11
NPHP1-204ENST00000417665 ZMYM4Q5VZL5 1548 aa8.13□□□□□ -1.11
NPHP1-204ENST00000417665 DENND4BO75064 1496 aaPredicted RBP8.13□□□□□ -1.11
NPHP1-204ENST00000417665 VPS8Q8N3P4 1428 aa8.13□□□□□ -1.11
NPHP1-204ENST00000417665 TRIM52Q96A61 297 aa8.13□□□□□ -1.11
NPHP1-204ENST00000417665 AKNAQ7Z591 1439 aa8.12□□□□□ -1.11
NPHP1-204ENST00000417665 YEATS2Q9ULM3 1422 aa8.12□□□□□ -1.11
NPHP1-204ENST00000417665 STRCQ7RTU9 1775 aa8.12□□□□□ -1.11
NPHP1-204ENST00000417665 ARID3CA6NKF2 412 aa8.11□□□□□ -1.11
NPHP1-204ENST00000417665 ANP32CO43423 234 aa8.11□□□□□ -1.11
NPHP1-204ENST00000417665 PREX1Q8TCU6 1659 aa8.11□□□□□ -1.11
NPHP1-204ENST00000417665 FER1L4A9Z1Z3 1794 aa8.11□□□□□ -1.11
NPHP1-204ENST00000417665 C11orf95C9JLR9 678 aaPredicted RBP8.11□□□□□ -1.11
NPHP1-204ENST00000417665 PKNOX2Q96KN3 472 aa8.11□□□□□ -1.11
NPHP1-204ENST00000417665 EFCAB5A4FU69 1503 aa8.1□□□□□ -1.11
NPHP1-204ENST00000417665 ZFYVE16Q7Z3T8 1539 aa8.1□□□□□ -1.11
NPHP1-204ENST00000417665 MAGI2Q86UL8 1455 aa8.1□□□□□ -1.11
NPHP1-204ENST00000417665 PPP1R15AO75807 674 aaPredicted RBP8.1□□□□□ -1.11
NPHP1-204ENST00000417665 DDX10Q13206 875 aaKnown RBP8.1□□□□□ -1.11
NPHP1-204ENST00000417665 DMRT2Q9Y5R5 561 aa8.1□□□□□ -1.11
NPHP1-204ENST00000417665 ARHGEF12Q9NZN5 1544 aa8.1□□□□□ -1.11
NPHP1-204ENST00000417665 PAK3O75914 559 aaPredicted RBP8.09□□□□□ -1.11
NPHP1-204ENST00000417665 RTN4Q9NQC3 1192 aaKnown RBP8.09□□□□□ -1.11
NPHP1-204ENST00000417665 CLIP1P30622 1438 aa8.09□□□□□ -1.11
NPHP1-204ENST00000417665 ZBTB22O15209 634 aa8.09□□□□□ -1.12
NPHP1-204ENST00000417665 ANP32AP39687 249 aaKnown RBP8.09□□□□□ -1.12
NPHP1-204ENST00000417665 IPO9Q96P70 1041 aaKnown RBP8.09□□□□□ -1.12
NPHP1-204ENST00000417665 CFAP74Q9C0B2 1584 aa8.09□□□□□ -1.12
NPHP1-204ENST00000417665 RAPGEF6Q8TEU7 1601 aa8.08□□□□□ -1.12
NPHP1-204ENST00000417665 PRXQ9BXM0 1461 aa8.08□□□□□ -1.12
NPHP1-204ENST00000417665 WASHC2AQ641Q2 1341 aa8.08□□□□□ -1.12
NPHP1-204ENST00000417665 USP35Q9P2H5 1018 aa8.08□□□□□ -1.12
NPHP1-204ENST00000417665 IQSEC2Q5JU85 1478 aa8.08□□□□□ -1.12
NPHP1-204ENST00000417665 SETD1BQ9UPS6 1966 aaKnown RBP8.08□□□□□ -1.12
NPHP1-204ENST00000417665 PTPRTO14522 1441 aa8.08□□□□□ -1.12
NPHP1-204ENST00000417665 ZBTB47Q9UFB7 747 aaPredicted RBP8.07□□□□□ -1.12
NPHP1-204ENST00000417665 LTBP4Q8N2S1 1624 aa8.07□□□□□ -1.12
NPHP1-204ENST00000417665 NUP153P49790 1475 aaKnown RBP8.06□□□□□ -1.12
NPHP1-204ENST00000417665 SAMD9Q5K651 1589 aa8.06□□□□□ -1.12
NPHP1-204ENST00000417665 HECW1Q76N89 1606 aa8.06□□□□□ -1.12
NPHP1-204ENST00000417665 MLECQ14165 292 aa8.06□□□□□ -1.12
NPHP1-204ENST00000417665 WASHC2CQ9Y4E1 1318 aa8.06□□□□□ -1.12
NPHP1-204ENST00000417665 P3H3Q8IVL6 736 aa8.05□□□□□ -1.12
NPHP1-204ENST00000417665 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.05□□□□□ -1.12
NPHP1-204ENST00000417665 UHRF1BP1Q6BDS2 1440 aa8.04□□□□□ -1.12
NPHP1-204ENST00000417665 ATP10AO60312 1499 aa8.04□□□□□ -1.12
NPHP1-204ENST00000417665 CEBPAP49715 358 aaPredicted RBP8.04□□□□□ -1.12
NPHP1-204ENST00000417665 IRX6P78412 446 aaPredicted RBP8.04□□□□□ -1.12
NPHP1-204ENST00000417665 GLIPR1L2Q4G1C9 344 aa8.04□□□□□ -1.12
NPHP1-204ENST00000417665 C9orf84Q5VXU9 1444 aa8.03□□□□□ -1.12
NPHP1-204ENST00000417665 RSPH6AQ9H0K4 717 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms