RNA–Protein interactions for RNA: ENST00000417495.7

SP140-204, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-204ENST00000417495 MAGI1Q96QZ7 1491 aaPredicted RBP12.69□□□□□ -0.38
SP140-204ENST00000417495 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.69□□□□□ -0.38
SP140-204ENST00000417495 PCF11O94913 1555 aaKnown RBP12.67□□□□□ -0.38
SP140-204ENST00000417495 CHGAP10645 457 aaKnown RBP12.67□□□□□ -0.38
SP140-204ENST00000417495 EIF4G3O43432 1585 aaKnown RBP12.66□□□□□ -0.38
SP140-204ENST00000417495 IQGAP2Q13576 1575 aa12.66□□□□□ -0.38
SP140-204ENST00000417495 SNAPC4Q5SXM2 1469 aa12.66□□□□□ -0.38
SP140-204ENST00000417495 RNF216Q9NWF9 866 aaPredicted RBP12.64□□□□□ -0.39
SP140-204ENST00000417495 FGD1P98174 961 aa12.64□□□□□ -0.39
SP140-204ENST00000417495 LRRC9Q6ZRR7 1453 aa12.64□□□□□ -0.39
SP140-204ENST00000417495 SPDYE4A6NLX3 237 aa12.62□□□□□ -0.39
SP140-204ENST00000417495 CCDC18Q5T9S5 1454 aa12.62□□□□□ -0.39
SP140-204ENST00000417495 KIAA0586Q9BVV6 1533 aa12.61□□□□□ -0.39
SP140-204ENST00000417495 ARID3CA6NKF2 412 aa12.61□□□□□ -0.39
SP140-204ENST00000417495 TDRD9Q8NDG6 1382 aaKnown RBP12.6□□□□□ -0.39
SP140-204ENST00000417495 HECW1Q76N89 1606 aa12.59□□□□□ -0.39
SP140-204ENST00000417495 SYNJ2O15056 1496 aa12.58□□□□□ -0.4
SP140-204ENST00000417495 TAF7LQ5H9L4 462 aa12.58□□□□□ -0.4
SP140-204ENST00000417495 PROM2Q8N271 834 aa12.58□□□□□ -0.4
SP140-204ENST00000417495 ARHGEF11O15085 1522 aa12.58□□□□□ -0.4
SP140-204ENST00000417495 ERCC6Q03468 1493 aa12.57□□□□□ -0.4
SP140-204ENST00000417495 GRIN2AQ12879 1464 aa12.57□□□□□ -0.4
SP140-204ENST00000417495 EHBP1L1Q8N3D4 1523 aa12.57□□□□□ -0.4
SP140-204ENST00000417495 LRRIQ1Q96JM4 1722 aa12.56□□□□□ -0.4
SP140-204ENST00000417495 GLIPR1L2Q4G1C9 344 aa12.55□□□□□ -0.4
SP140-204ENST00000417495 NUP160Q12769 1436 aa12.55□□□□□ -0.4
SP140-204ENST00000417495 KIAA0556O60303 1618 aa12.55□□□□□ -0.4
SP140-204ENST00000417495 ZNF428Q96B54 188 aa12.53□□□□□ -0.4
SP140-204ENST00000417495 ZNF608Q9ULD9 1512 aaPredicted RBP12.53□□□□□ -0.4
SP140-204ENST00000417495 SUPT6HQ7KZ85 1726 aaKnown RBP12.52□□□□□ -0.4
SP140-204ENST00000417495 DEKP35659 375 aaKnown RBP12.52□□□□□ -0.4
SP140-204ENST00000417495 NEUROD2Q15784 382 aa12.52□□□□□ -0.4
SP140-204ENST00000417495 CCNB3Q8WWL7 1395 aa12.52□□□□□ -0.41
SP140-204ENST00000417495 FHOD3Q2V2M9 1422 aa12.51□□□□□ -0.41
SP140-204ENST00000417495 BCL11BQ9C0K0 894 aaPredicted RBP12.5□□□□□ -0.41
SP140-204ENST00000417495 NKX1-1Q15270 411 aaPredicted RBP12.49□□□□□ -0.41
SP140-204ENST00000417495 DISP1Q96F81 1524 aa12.48□□□□□ -0.41
SP140-204ENST00000417495 AAMPQ13685 434 aa12.48□□□□□ -0.41
SP140-204ENST00000417495 CEP170Q5SW79 1584 aa12.48□□□□□ -0.41
SP140-204ENST00000417495 TCOF1Q13428 1488 aaKnown RBP12.48□□□□□ -0.41
SP140-204ENST00000417495 DIEXFQ68CQ4 756 aaKnown RBP12.48□□□□□ -0.41
SP140-204ENST00000417495 ADCY10Q96PN6 1610 aa12.47□□□□□ -0.41
SP140-204ENST00000417495 LMOD2Q6P5Q4 547 aa12.47□□□□□ -0.41
SP140-204ENST00000417495 MKRN4PQ13434 485 aaPredicted RBP12.46□□□□□ -0.41
SP140-204ENST00000417495 SHROOM2Q13796 1616 aa12.45□□□□□ -0.42
SP140-204ENST00000417495 RAPGEF6Q8TEU7 1601 aa12.45□□□□□ -0.42
SP140-204ENST00000417495 KANK4Q5T7N3 995 aaPredicted RBP12.45□□□□□ -0.42
SP140-204ENST00000417495 AKNAQ7Z591 1439 aa12.45□□□□□ -0.42
SP140-204ENST00000417495 ZMYND15Q9H091 742 aa12.43□□□□□ -0.42
SP140-204ENST00000417495 SUPT16HQ9Y5B9 1047 aaKnown RBP12.43□□□□□ -0.42
SP140-204ENST00000417495 EPRSP07814 1512 aaKnown RBP12.43□□□□□ -0.42
SP140-204ENST00000417495 MIA2Q96PC5 1412 aa12.43□□□□□ -0.42
SP140-204ENST00000417495 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.42□□□□□ -0.42
SP140-204ENST00000417495 CCDC9Q9Y3X0 531 aaKnown RBP12.42□□□□□ -0.42
SP140-204ENST00000417495 SLC24A3Q9HC58 644 aa12.41□□□□□ -0.42
SP140-204ENST00000417495 FGD6Q6ZV73 1430 aa12.4□□□□□ -0.42
SP140-204ENST00000417495 MYOM3Q5VTT5 1437 aa12.4□□□□□ -0.42
SP140-204ENST00000417495 PHLDB1Q86UU1 1377 aa12.4□□□□□ -0.42
SP140-204ENST00000417495 ABCA8O94911 1581 aa12.39□□□□□ -0.43
SP140-204ENST00000417495 NCOA2Q15596 1464 aa12.39□□□□□ -0.43
SP140-204ENST00000417495 CARMIL2Q6F5E8 1435 aa12.38□□□□□ -0.43
SP140-204ENST00000417495 RSPH6AQ9H0K4 717 aa12.38□□□□□ -0.43
SP140-204ENST00000417495 GCC2Q8IWJ2 1684 aa12.38□□□□□ -0.43
SP140-204ENST00000417495 ITSN2Q9NZM3 1697 aa12.37□□□□□ -0.43
SP140-204ENST00000417495 A0A0U1RQG5 324 aaPredicted RBP12.37□□□□□ -0.43
SP140-204ENST00000417495 RBM10P98175 930 aaKnown RBP12.37□□□□□ -0.43
SP140-204ENST00000417495 PTPN23Q9H3S7 1636 aa12.37□□□□□ -0.43
SP140-204ENST00000417495 MAGI3Q5TCQ9 1506 aa12.36□□□□□ -0.43
SP140-204ENST00000417495 CCER1Q8TC90 406 aaPredicted RBP12.36□□□□□ -0.43
SP140-204ENST00000417495 DHX57Q6P158 1386 aaKnown RBP12.35□□□□□ -0.43
SP140-204ENST00000417495 SETD5Q9C0A6 1442 aa12.35□□□□□ -0.43
SP140-204ENST00000417495 NUP153P49790 1475 aaKnown RBP12.35□□□□□ -0.43
SP140-204ENST00000417495 BRD2P25440 801 aaKnown RBP12.34□□□□□ -0.43
SP140-204ENST00000417495 CHD1O14646 1710 aa12.33□□□□□ -0.43
SP140-204ENST00000417495 MTUS2Q5JR59 1369 aa12.33□□□□□ -0.44
SP140-204ENST00000417495 HFM1A2PYH4 1435 aa12.32□□□□□ -0.44
SP140-204ENST00000417495 CHMP4AQ9BY43 222 aa12.32□□□□□ -0.44
SP140-204ENST00000417495 SPOCK2Q92563 424 aa12.32□□□□□ -0.44
SP140-204ENST00000417495 ZNF326Q5BKZ1 582 aaKnown RBP12.31□□□□□ -0.44
SP140-204ENST00000417495 RBM19Q9Y4C8 960 aaKnown RBP12.31□□□□□ -0.44
SP140-204ENST00000417495 CLASP1Q7Z460 1538 aa12.31□□□□□ -0.44
SP140-204ENST00000417495 RNF25Q96BH1 459 aaPredicted RBP12.31□□□□□ -0.44
SP140-204ENST00000417495 DNMT1P26358 1616 aaKnown RBP12.29□□□□□ -0.44
SP140-204ENST00000417495 GPBP1L1Q9HC44 474 aaPredicted RBP12.29□□□□□ -0.44
SP140-204ENST00000417495 APBB1O00213 710 aa12.29□□□□□ -0.44
SP140-204ENST00000417495 TROQ12816 1431 aaPredicted RBP12.29□□□□□ -0.44
SP140-204ENST00000417495 RSPH4AQ5TD94 716 aa12.29□□□□□ -0.44
SP140-204ENST00000417495 ROCK1Q13464 1354 aa12.29□□□□□ -0.44
SP140-204ENST00000417495 FANCIQ9NVI1 1328 aa12.28□□□□□ -0.44
SP140-204ENST00000417495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.28□□□□□ -0.44
SP140-204ENST00000417495 MSH5O43196 834 aa12.28□□□□□ -0.44
SP140-204ENST00000417495 KCNV2Q8TDN2 545 aa12.28□□□□□ -0.44
SP140-204ENST00000417495 GTPBP6O43824 516 aaPredicted RBP12.28□□□□□ -0.44
SP140-204ENST00000417495 ZBTB7CA1YPR0 619 aa12.27□□□□□ -0.45
SP140-204ENST00000417495 CROCC2H7BZ55 1655 aa12.27□□□□□ -0.45
SP140-204ENST00000417495 ADGBQ8N7X0 1667 aa12.27□□□□□ -0.45
SP140-204ENST00000417495 UHRF1BP1LA0JNW5 1464 aa12.26□□□□□ -0.45
SP140-204ENST00000417495 MAPKBP1O60336 1514 aa12.26□□□□□ -0.45
SP140-204ENST00000417495 CHMP7Q8WUX9 453 aaPredicted RBP12.26□□□□□ -0.45
SP140-204ENST00000417495 ZC3H15Q8WU90 426 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms