RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 PLPPR3Q6T4P5 718 aa21.77■■□□□ 1.08
CPNE1-209ENST00000415920 KIF14Q15058 1648 aa21.77■■□□□ 1.07
CPNE1-209ENST00000415920 PLCH2O75038 1416 aa21.76■■□□□ 1.07
CPNE1-209ENST00000415920 POGZQ7Z3K3 1410 aa21.75■■□□□ 1.07
CPNE1-209ENST00000415920 SCAPERQ9BY12 1400 aa21.75■■□□□ 1.07
CPNE1-209ENST00000415920 ATP1B4Q9UN42 357 aaPredicted RBP21.74■■□□□ 1.07
CPNE1-209ENST00000415920 LRRIQ1Q96JM4 1722 aa21.74■■□□□ 1.07
CPNE1-209ENST00000415920 MYO5CQ9NQX4 1742 aa21.73■■□□□ 1.07
CPNE1-209ENST00000415920 HSPA2P54652 639 aa21.72■■□□□ 1.07
CPNE1-209ENST00000415920 MLECQ14165 292 aa21.72■■□□□ 1.07
CPNE1-209ENST00000415920 MAGI2Q86UL8 1455 aa21.71■■□□□ 1.07
CPNE1-209ENST00000415920 FER1L4A9Z1Z3 1794 aa21.71■■□□□ 1.07
CPNE1-209ENST00000415920 FMN1Q68DA7 1419 aa21.71■■□□□ 1.07
CPNE1-209ENST00000415920 FBXO41Q8TF61 875 aa21.7■■□□□ 1.06
CPNE1-209ENST00000415920 ATP10AO60312 1499 aa21.64■■□□□ 1.06
CPNE1-209ENST00000415920 TROQ12816 1431 aaPredicted RBP21.64■■□□□ 1.06
CPNE1-209ENST00000415920 ARHGEF12Q9NZN5 1544 aa21.64■■□□□ 1.05
CPNE1-209ENST00000415920 FYCO1Q9BQS8 1478 aa21.64■■□□□ 1.05
CPNE1-209ENST00000415920 VPS8Q8N3P4 1428 aa21.63■■□□□ 1.05
CPNE1-209ENST00000415920 EFCAB2Q5VUJ9 269 aa21.63■■□□□ 1.05
CPNE1-209ENST00000415920 C9orf84Q5VXU9 1444 aa21.63■■□□□ 1.05
CPNE1-209ENST00000415920 ARHGAP5Q13017 1502 aa21.62■■□□□ 1.05
CPNE1-209ENST00000415920 CDC42BPBQ9Y5S2 1711 aa21.6■■□□□ 1.05
CPNE1-209ENST00000415920 AFAP1Q8N556 730 aa21.6■■□□□ 1.05
CPNE1-209ENST00000415920 KDM5CP41229 1560 aa21.6■■□□□ 1.05
CPNE1-209ENST00000415920 CDK11AQ9UQ88 783 aaPredicted RBP21.58■■□□□ 1.05
CPNE1-209ENST00000415920 ZNF518AQ6AHZ1 1483 aa21.58■■□□□ 1.04
CPNE1-209ENST00000415920 DIP2CQ9Y2E4 1556 aa21.57■■□□□ 1.04
CPNE1-209ENST00000415920 CASKIN1Q8WXD9 1431 aa21.57■■□□□ 1.04
CPNE1-209ENST00000415920 CEBPAP49715 358 aaPredicted RBP21.57■■□□□ 1.04
CPNE1-209ENST00000415920 ABCA6Q8N139 1617 aa21.55■■□□□ 1.04
CPNE1-209ENST00000415920 PREX2Q70Z35 1606 aa21.54■■□□□ 1.04
CPNE1-209ENST00000415920 PREX1Q8TCU6 1659 aa21.53■■□□□ 1.04
CPNE1-209ENST00000415920 TRAPPC8Q9Y2L5 1435 aa21.52■■□□□ 1.04
CPNE1-209ENST00000415920 CCDC18Q5T9S5 1454 aa21.52■■□□□ 1.03
CPNE1-209ENST00000415920 ABCC1P33527 1531 aa21.51■■□□□ 1.03
CPNE1-209ENST00000415920 ITSN2Q9NZM3 1697 aa21.5■■□□□ 1.03
CPNE1-209ENST00000415920 CDC42BPAQ5VT25 1732 aa21.49■■□□□ 1.03
CPNE1-209ENST00000415920 TIAM1Q13009 1591 aa21.48■■□□□ 1.03
CPNE1-209ENST00000415920 REREQ9P2R6 1566 aa21.48■■□□□ 1.03
CPNE1-209ENST00000415920 MLH3Q9UHC1 1453 aa21.47■■□□□ 1.03
CPNE1-209ENST00000415920 STRCQ7RTU9 1775 aa21.47■■□□□ 1.03
CPNE1-209ENST00000415920 MYT1LQ9UL68 1186 aa21.47■■□□□ 1.03
CPNE1-209ENST00000415920 C3P01024 1663 aa21.45■■□□□ 1.02
CPNE1-209ENST00000415920 KIDINS220Q9ULH0 1771 aa21.45■■□□□ 1.02
CPNE1-209ENST00000415920 CERKQ8TCT0 537 aa21.44■■□□□ 1.02
CPNE1-209ENST00000415920 AGLP35573 1532 aa21.41■■□□□ 1.02
CPNE1-209ENST00000415920 SAMD9LQ8IVG5 1584 aa21.4■■□□□ 1.02
CPNE1-209ENST00000415920 UHRF1BP1Q6BDS2 1440 aa21.38■■□□□ 1.01
CPNE1-209ENST00000415920 EHBP1L1Q8N3D4 1523 aa21.38■■□□□ 1.01
CPNE1-209ENST00000415920 SYCP2Q9BX26 1530 aa21.37■■□□□ 1.01
CPNE1-209ENST00000415920 SETD1BQ9UPS6 1966 aaKnown RBP21.36■■□□□ 1.01
CPNE1-209ENST00000415920 MAP3K1Q13233 1512 aa21.36■■□□□ 1.01
CPNE1-209ENST00000415920 GPATCH8Q9UKJ3 1502 aaKnown RBP21.35■■□□□ 1.01
CPNE1-209ENST00000415920 ZNF777Q9ULD5 760 aaPredicted RBP21.35■■□□□ 1.01
CPNE1-209ENST00000415920 SUPT6HQ7KZ85 1726 aaKnown RBP21.33■■□□□ 1.01
CPNE1-209ENST00000415920 APLP2Q06481 763 aa21.31■■□□□ 1
CPNE1-209ENST00000415920 HNRNPMP52272 730 aaKnown RBP eCLIP21.3■■□□□ 1
CPNE1-209ENST00000415920 MTUS2Q5JR59 1369 aa21.29■■□□□ 1
CPNE1-209ENST00000415920 LRRC9Q6ZRR7 1453 aa21.28■■□□□ 1
CPNE1-209ENST00000415920 INO80Q9ULG1 1556 aaPredicted RBP21.27■■□□□ 1
CPNE1-209ENST00000415920 ESF1Q9H501 851 aaKnown RBP21.27■■□□□ 1
CPNE1-209ENST00000415920 ATP7AQ04656 1500 aa21.27■■□□□ 1
CPNE1-209ENST00000415920 SPAG9O60271 1321 aaKnown RBP21.26■□□□□ 0.99
CPNE1-209ENST00000415920 MROH2AA6NES4 1674 aa21.25■□□□□ 0.99
CPNE1-209ENST00000415920 PLXNC1O60486 1568 aa21.25■□□□□ 0.99
CPNE1-209ENST00000415920 CNTLNQ9NXG0 1405 aa21.25■□□□□ 0.99
CPNE1-209ENST00000415920 DMRT2Q9Y5R5 561 aa21.25■□□□□ 0.99
CPNE1-209ENST00000415920 CLTCQ00610 1675 aaKnown RBP21.24■□□□□ 0.99
CPNE1-209ENST00000415920 PTPRTO14522 1441 aa21.24■□□□□ 0.99
CPNE1-209ENST00000415920 NCOA1Q15788 1441 aa21.23■□□□□ 0.99
CPNE1-209ENST00000415920 LTBP4Q8N2S1 1624 aa21.22■□□□□ 0.99
CPNE1-209ENST00000415920 CFDP1Q9UEE9 299 aaPredicted RBP21.22■□□□□ 0.99
CPNE1-209ENST00000415920 ZMYM3Q14202 1370 aa21.22■□□□□ 0.99
CPNE1-209ENST00000415920 CCNB3Q8WWL7 1395 aa21.22■□□□□ 0.99
CPNE1-209ENST00000415920 KIAA1107Q9UPP5 1409 aa21.21■□□□□ 0.99
CPNE1-209ENST00000415920 ZNF644Q9H582 1327 aaPredicted RBP21.21■□□□□ 0.99
CPNE1-209ENST00000415920 CAMSAP1Q5T5Y3 1602 aa21.21■□□□□ 0.99
CPNE1-209ENST00000415920 A2MP01023 1474 aa21.2■□□□□ 0.98
CPNE1-209ENST00000415920 NPATQ14207 1427 aa21.19■□□□□ 0.98
CPNE1-209ENST00000415920 PLEKHH2Q8IVE3 1493 aa21.18■□□□□ 0.98
CPNE1-209ENST00000415920 MYO3AQ8NEV4 1616 aa21.17■□□□□ 0.98
CPNE1-209ENST00000415920 NCOA2Q15596 1464 aa21.16■□□□□ 0.98
CPNE1-209ENST00000415920 KANK4Q5T7N3 995 aaPredicted RBP21.16■□□□□ 0.98
CPNE1-209ENST00000415920 MBD5Q9P267 1494 aa21.14■□□□□ 0.98
CPNE1-209ENST00000415920 PTPRKQ15262 1439 aa21.14■□□□□ 0.98
CPNE1-209ENST00000415920 NCKAP5LQ9HCH0 1330 aa21.14■□□□□ 0.97
CPNE1-209ENST00000415920 ZNF142P52746 1687 aaPredicted RBP21.14■□□□□ 0.97
CPNE1-209ENST00000415920 ADGBQ8N7X0 1667 aa21.14■□□□□ 0.97
CPNE1-209ENST00000415920 GGT6Q6P531 493 aa21.13■□□□□ 0.97
CPNE1-209ENST00000415920 PPARGC1BQ86YN6 1023 aaKnown RBP21.12■□□□□ 0.97
CPNE1-209ENST00000415920 CEP170BQ9Y4F5 1589 aaPredicted RBP21.11■□□□□ 0.97
CPNE1-209ENST00000415920 ILDR2Q71H61 639 aa21.09■□□□□ 0.97
CPNE1-209ENST00000415920 DISP3Q9P2K9 1392 aa21.08■□□□□ 0.96
CPNE1-209ENST00000415920 ZNF335Q9H4Z2 1342 aaPredicted RBP21.07■□□□□ 0.96
CPNE1-209ENST00000415920 PLA2R1Q13018 1463 aa21.05■□□□□ 0.96
CPNE1-209ENST00000415920 TCOF1Q13428 1488 aaKnown RBP21.05■□□□□ 0.96
CPNE1-209ENST00000415920 IQSEC2Q5JU85 1478 aa21.04■□□□□ 0.96
CPNE1-209ENST00000415920 RTEL1-TNFRSF6BF6WH68 1400 aa21.03■□□□□ 0.96
CPNE1-209ENST00000415920 MYOM3Q5VTT5 1437 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms