RNA–Protein interactions for RNA: ENST00000415585.6

CSTF2-203, Transcript of cleavage stimulation factor subunit 2, humanhuman

TSL 1 (best) BASIC

Gene CSTF2, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-203ENST00000415585 MPHOSPH9Q99550 1183 aa18.71■□□□□ 0.59
CSTF2-203ENST00000415585 DAPK1P53355 1430 aa18.71■□□□□ 0.59
CSTF2-203ENST00000415585 ROCK1Q13464 1354 aa18.69■□□□□ 0.58
CSTF2-203ENST00000415585 CHD1O14646 1710 aa18.68■□□□□ 0.58
CSTF2-203ENST00000415585 ABCC5O15440 1437 aa18.67■□□□□ 0.58
CSTF2-203ENST00000415585 HSPA5P11021 654 aaKnown RBP18.66■□□□□ 0.58
CSTF2-203ENST00000415585 WASHC2AQ641Q2 1341 aa18.64■□□□□ 0.57
CSTF2-203ENST00000415585 FKBP8Q14318 412 aa18.64■□□□□ 0.57
CSTF2-203ENST00000415585 FOXD1Q16676 465 aa18.63■□□□□ 0.57
CSTF2-203ENST00000415585 ZNF644Q9H582 1327 aaPredicted RBP18.63■□□□□ 0.57
CSTF2-203ENST00000415585 L3MBTL2Q969R5 705 aa18.62■□□□□ 0.57
CSTF2-203ENST00000415585 CDK11AQ9UQ88 783 aaPredicted RBP18.62■□□□□ 0.57
CSTF2-203ENST00000415585 ANKRD30BQ9BXX2 1392 aa18.61■□□□□ 0.57
CSTF2-203ENST00000415585 EIF4G2P78344 907 aaKnown RBP eCLIP18.61■□□□□ 0.57
CSTF2-203ENST00000415585 TSHZ2Q9NRE2 1034 aa18.61■□□□□ 0.57
CSTF2-203ENST00000415585 RPRD2Q5VT52 1461 aaKnown RBP18.61■□□□□ 0.57
CSTF2-203ENST00000415585 MYT1Q01538 1121 aa18.61■□□□□ 0.57
CSTF2-203ENST00000415585 BCANQ96GW7 911 aa18.6■□□□□ 0.57
CSTF2-203ENST00000415585 ITSN2Q9NZM3 1697 aa18.59■□□□□ 0.57
CSTF2-203ENST00000415585 TROQ12816 1431 aaPredicted RBP18.59■□□□□ 0.57
CSTF2-203ENST00000415585 TEX14Q8IWB6 1497 aa18.58■□□□□ 0.56
CSTF2-203ENST00000415585 CARMIL2Q6F5E8 1435 aa18.58■□□□□ 0.56
CSTF2-203ENST00000415585 PRG4Q92954 1404 aaPredicted RBP18.58■□□□□ 0.56
CSTF2-203ENST00000415585 PLB1Q6P1J6 1458 aa18.57■□□□□ 0.56
CSTF2-203ENST00000415585 ADGBQ8N7X0 1667 aa18.57■□□□□ 0.56
CSTF2-203ENST00000415585 ADCY10Q96PN6 1610 aa18.57■□□□□ 0.56
CSTF2-203ENST00000415585 CAMSAP2Q08AD1 1489 aa18.56■□□□□ 0.56
CSTF2-203ENST00000415585 NEFLP07196 543 aa18.56■□□□□ 0.56
CSTF2-203ENST00000415585 CNTLNQ9NXG0 1405 aa18.55■□□□□ 0.56
CSTF2-203ENST00000415585 KIF14Q15058 1648 aa18.54■□□□□ 0.56
CSTF2-203ENST00000415585 NCOA1Q15788 1441 aa18.54■□□□□ 0.56
CSTF2-203ENST00000415585 SLC4A1APQ9BWU0 796 aaKnown RBP18.54■□□□□ 0.56
CSTF2-203ENST00000415585 CROCC2H7BZ55 1655 aa18.53■□□□□ 0.56
CSTF2-203ENST00000415585 GPATCH8Q9UKJ3 1502 aaKnown RBP18.53■□□□□ 0.56
CSTF2-203ENST00000415585 NBPF8Q3BBV2 869 aa18.52■□□□□ 0.56
CSTF2-203ENST00000415585 POLR1AO95602 1720 aaPredicted RBP18.52■□□□□ 0.55
CSTF2-203ENST00000415585 PZPP20742 1482 aa18.52■□□□□ 0.55
CSTF2-203ENST00000415585 CFDP1Q9UEE9 299 aaPredicted RBP18.51■□□□□ 0.55
CSTF2-203ENST00000415585 CCDC7Q96M83 1385 aa18.51■□□□□ 0.55
CSTF2-203ENST00000415585 ERCC6L2Q5T890 1561 aa18.5■□□□□ 0.55
CSTF2-203ENST00000415585 C11orf95C9JLR9 678 aaPredicted RBP18.5■□□□□ 0.55
CSTF2-203ENST00000415585 ADGRL2O95490 1459 aa18.49■□□□□ 0.55
CSTF2-203ENST00000415585 HNRNPUQ00839 825 aaKnown RBP eCLIP18.49■□□□□ 0.55
CSTF2-203ENST00000415585 SHROOM2Q13796 1616 aa18.49■□□□□ 0.55
CSTF2-203ENST00000415585 SPATA31E1Q6ZUB1 1445 aa18.47■□□□□ 0.55
CSTF2-203ENST00000415585 CLASP1Q7Z460 1538 aa18.46■□□□□ 0.55
CSTF2-203ENST00000415585 PTPRGP23470 1445 aa18.46■□□□□ 0.55
CSTF2-203ENST00000415585 ABCA8O94911 1581 aa18.45■□□□□ 0.54
CSTF2-203ENST00000415585 CDC42BPAQ5VT25 1732 aa18.44■□□□□ 0.54
CSTF2-203ENST00000415585 ZNF777Q9ULD5 760 aaPredicted RBP18.44■□□□□ 0.54
CSTF2-203ENST00000415585 KIAA1107Q9UPP5 1409 aa18.43■□□□□ 0.54
CSTF2-203ENST00000415585 PRKRIP1Q9H875 184 aaPredicted RBP18.43■□□□□ 0.54
CSTF2-203ENST00000415585 MBD5Q9P267 1494 aa18.43■□□□□ 0.54
CSTF2-203ENST00000415585 CCDC184Q52MB2 194 aa18.42■□□□□ 0.54
CSTF2-203ENST00000415585 ANKRD30AQ9BXX3 1397 aa18.42■□□□□ 0.54
CSTF2-203ENST00000415585 KIF7Q2M1P5 1343 aa18.41■□□□□ 0.54
CSTF2-203ENST00000415585 ATP10BO94823 1461 aa18.39■□□□□ 0.54
CSTF2-203ENST00000415585 ABCC10Q5T3U5 1492 aa18.39■□□□□ 0.53
CSTF2-203ENST00000415585 ANKRD50Q9ULJ7 1429 aa18.38■□□□□ 0.53
CSTF2-203ENST00000415585 SHANK2Q9UPX8 1470 aa18.37■□□□□ 0.53
CSTF2-203ENST00000415585 PKD2Q13563 968 aa18.37■□□□□ 0.53
CSTF2-203ENST00000415585 PLEKHD1A6NEE1 506 aa18.36■□□□□ 0.53
CSTF2-203ENST00000415585 BCORL1Q5H9F3 1711 aa18.34■□□□□ 0.53
CSTF2-203ENST00000415585 MRS2Q9HD23 443 aa18.34■□□□□ 0.53
CSTF2-203ENST00000415585 C9orf84Q5VXU9 1444 aa18.34■□□□□ 0.53
CSTF2-203ENST00000415585 KDM5CP41229 1560 aa18.32■□□□□ 0.52
CSTF2-203ENST00000415585 FAM9BQ8IZU0 186 aa18.32■□□□□ 0.52
CSTF2-203ENST00000415585 USP47Q96K76 1375 aa18.31■□□□□ 0.52
CSTF2-203ENST00000415585 KDM5DQ9BY66 1539 aa18.31■□□□□ 0.52
CSTF2-203ENST00000415585 NUP155O75694 1391 aa18.3■□□□□ 0.52
CSTF2-203ENST00000415585 ZNF326Q5BKZ1 582 aaKnown RBP18.29■□□□□ 0.52
CSTF2-203ENST00000415585 OSCARQ8IYS5 282 aa18.29■□□□□ 0.52
CSTF2-203ENST00000415585 UHRF1BP1Q6BDS2 1440 aa18.29■□□□□ 0.52
CSTF2-203ENST00000415585 ARHGEF5Q12774 1597 aa18.29■□□□□ 0.52
CSTF2-203ENST00000415585 IRX6P78412 446 aaPredicted RBP18.28■□□□□ 0.52
CSTF2-203ENST00000415585 ZBED9Q6R2W3 1325 aa18.28■□□□□ 0.52
CSTF2-203ENST00000415585 DHX29Q7Z478 1369 aaKnown RBP18.27■□□□□ 0.52
CSTF2-203ENST00000415585 RBM19Q9Y4C8 960 aaKnown RBP18.27■□□□□ 0.51
CSTF2-203ENST00000415585 ARHGEF12Q9NZN5 1544 aa18.26■□□□□ 0.51
CSTF2-203ENST00000415585 RALGAPBQ86X10 1494 aa18.26■□□□□ 0.51
CSTF2-203ENST00000415585 TSPY4P0CV99 314 aa18.26■□□□□ 0.51
CSTF2-203ENST00000415585 TSPY10P0CW01 314 aa18.26■□□□□ 0.51
CSTF2-203ENST00000415585 ABCC2Q92887 1545 aa18.25■□□□□ 0.51
CSTF2-203ENST00000415585 CDC42BPBQ9Y5S2 1711 aa18.24■□□□□ 0.51
CSTF2-203ENST00000415585 KIF15Q9NS87 1388 aa18.24■□□□□ 0.51
CSTF2-203ENST00000415585 ERICH6BQ5W0A0 696 aa18.24■□□□□ 0.51
CSTF2-203ENST00000415585 ARID4BQ4LE39 1312 aaPredicted RBP18.23■□□□□ 0.51
CSTF2-203ENST00000415585 HNRNPMP52272 730 aaKnown RBP eCLIP18.23■□□□□ 0.51
CSTF2-203ENST00000415585 PREX2Q70Z35 1606 aa18.23■□□□□ 0.51
CSTF2-203ENST00000415585 SAMD9LQ8IVG5 1584 aa18.23■□□□□ 0.51
CSTF2-203ENST00000415585 CCDC141Q6ZP82 1450 aa18.2■□□□□ 0.5
CSTF2-203ENST00000415585 POLR3GLQ9BT43 218 aa18.2■□□□□ 0.5
CSTF2-203ENST00000415585 ANP32EQ9BTT0 268 aa18.2■□□□□ 0.5
CSTF2-203ENST00000415585 ROCK2O75116 1388 aaKnown RBP18.18■□□□□ 0.5
CSTF2-203ENST00000415585 CARD11Q9BXL7 1154 aa18.18■□□□□ 0.5
CSTF2-203ENST00000415585 UHRF1BP1LA0JNW5 1464 aa18.17■□□□□ 0.5
CSTF2-203ENST00000415585 PPP4R2Q9NY27 417 aa18.17■□□□□ 0.5
CSTF2-203ENST00000415585 FAM135AQ9P2D6 1515 aa18.17■□□□□ 0.5
CSTF2-203ENST00000415585 CNGB1Q14028 1251 aaPredicted RBP18.14■□□□□ 0.49
CSTF2-203ENST00000415585 KDM2AQ9Y2K7 1162 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms