RNA–Protein interactions for RNA: ENST00000415434.5

LINC01237-201, Transcript of long intergenic non-protein coding RNA 1237, humanhuman

TSL 4 BASIC

Gene LINC01237, Length 573 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01237-201ENST00000415434 CDK11AQ9UQ88 783 aaPredicted RBP22.99■■□□□ 1.27
LINC01237-201ENST00000415434 EFCAB2Q5VUJ9 269 aa22.98■■□□□ 1.27
LINC01237-201ENST00000415434 CHIC1Q5VXU3 224 aa22.98■■□□□ 1.27
LINC01237-201ENST00000415434 FBXO41Q8TF61 875 aa22.98■■□□□ 1.27
LINC01237-201ENST00000415434 TROQ12816 1431 aaPredicted RBP22.98■■□□□ 1.27
LINC01237-201ENST00000415434 KIF14Q15058 1648 aa22.96■■□□□ 1.27
LINC01237-201ENST00000415434 MYO5CQ9NQX4 1742 aa22.96■■□□□ 1.27
LINC01237-201ENST00000415434 ATP10AO60312 1499 aa22.95■■□□□ 1.26
LINC01237-201ENST00000415434 EHMT2Q96KQ7 1210 aa22.95■■□□□ 1.26
LINC01237-201ENST00000415434 ATP1B4Q9UN42 357 aaPredicted RBP22.94■■□□□ 1.26
LINC01237-201ENST00000415434 ARHGEF12Q9NZN5 1544 aa22.93■■□□□ 1.26
LINC01237-201ENST00000415434 C9orf84Q5VXU9 1444 aa22.93■■□□□ 1.26
LINC01237-201ENST00000415434 ZNF518AQ6AHZ1 1483 aa22.92■■□□□ 1.26
LINC01237-201ENST00000415434 CLIP1P30622 1438 aa22.91■■□□□ 1.26
LINC01237-201ENST00000415434 KDM5CP41229 1560 aa22.9■■□□□ 1.26
LINC01237-201ENST00000415434 FER1L4A9Z1Z3 1794 aa22.89■■□□□ 1.25
LINC01237-201ENST00000415434 ARHGAP5Q13017 1502 aa22.88■■□□□ 1.25
LINC01237-201ENST00000415434 MLECQ14165 292 aa22.88■■□□□ 1.25
LINC01237-201ENST00000415434 HSPA2P54652 639 aa22.87■■□□□ 1.25
LINC01237-201ENST00000415434 LRRIQ1Q96JM4 1722 aa22.87■■□□□ 1.25
LINC01237-201ENST00000415434 CASKIN1Q8WXD9 1431 aa22.85■■□□□ 1.25
LINC01237-201ENST00000415434 AFAP1Q8N556 730 aa22.84■■□□□ 1.25
LINC01237-201ENST00000415434 CCDC18Q5T9S5 1454 aa22.83■■□□□ 1.25
LINC01237-201ENST00000415434 REREQ9P2R6 1566 aa22.82■■□□□ 1.24
LINC01237-201ENST00000415434 PLPPR3Q6T4P5 718 aa22.82■■□□□ 1.24
LINC01237-201ENST00000415434 MLH3Q9UHC1 1453 aa22.81■■□□□ 1.24
LINC01237-201ENST00000415434 DIP2CQ9Y2E4 1556 aa22.8■■□□□ 1.24
LINC01237-201ENST00000415434 CDC42BPBQ9Y5S2 1711 aa22.79■■□□□ 1.24
LINC01237-201ENST00000415434 PREX2Q70Z35 1606 aa22.79■■□□□ 1.24
LINC01237-201ENST00000415434 ABCC1P33527 1531 aa22.78■■□□□ 1.24
LINC01237-201ENST00000415434 TRAPPC8Q9Y2L5 1435 aa22.75■■□□□ 1.23
LINC01237-201ENST00000415434 PREX1Q8TCU6 1659 aa22.75■■□□□ 1.23
LINC01237-201ENST00000415434 FYCO1Q9BQS8 1478 aa22.75■■□□□ 1.23
LINC01237-201ENST00000415434 ABCA6Q8N139 1617 aa22.75■■□□□ 1.23
LINC01237-201ENST00000415434 AGLP35573 1532 aa22.74■■□□□ 1.23
LINC01237-201ENST00000415434 CEBPAP49715 358 aaPredicted RBP22.73■■□□□ 1.23
LINC01237-201ENST00000415434 ITSN2Q9NZM3 1697 aa22.7■■□□□ 1.22
LINC01237-201ENST00000415434 MYT1LQ9UL68 1186 aa22.68■■□□□ 1.22
LINC01237-201ENST00000415434 CDC42BPAQ5VT25 1732 aa22.68■■□□□ 1.22
LINC01237-201ENST00000415434 UHRF1BP1Q6BDS2 1440 aa22.67■■□□□ 1.22
LINC01237-201ENST00000415434 CERKQ8TCT0 537 aa22.67■■□□□ 1.22
LINC01237-201ENST00000415434 KIDINS220Q9ULH0 1771 aa22.66■■□□□ 1.22
LINC01237-201ENST00000415434 SETD1BQ9UPS6 1966 aaKnown RBP22.65■■□□□ 1.22
LINC01237-201ENST00000415434 GPATCH8Q9UKJ3 1502 aaKnown RBP22.64■■□□□ 1.21
LINC01237-201ENST00000415434 SAMD9LQ8IVG5 1584 aa22.63■■□□□ 1.21
LINC01237-201ENST00000415434 C3P01024 1663 aa22.62■■□□□ 1.21
LINC01237-201ENST00000415434 CNTLNQ9NXG0 1405 aa22.62■■□□□ 1.21
LINC01237-201ENST00000415434 STRCQ7RTU9 1775 aa22.61■■□□□ 1.21
LINC01237-201ENST00000415434 DMRT2Q9Y5R5 561 aa22.61■■□□□ 1.21
LINC01237-201ENST00000415434 KIAA1107Q9UPP5 1409 aa22.59■■□□□ 1.21
LINC01237-201ENST00000415434 SYCP2Q9BX26 1530 aa22.59■■□□□ 1.21
LINC01237-201ENST00000415434 ESF1Q9H501 851 aaKnown RBP22.57■■□□□ 1.2
LINC01237-201ENST00000415434 PTPRTO14522 1441 aa22.56■■□□□ 1.2
LINC01237-201ENST00000415434 SPAG9O60271 1321 aaKnown RBP22.56■■□□□ 1.2
LINC01237-201ENST00000415434 PLEKHH2Q8IVE3 1493 aa22.55■■□□□ 1.2
LINC01237-201ENST00000415434 ZNF777Q9ULD5 760 aaPredicted RBP22.55■■□□□ 1.2
LINC01237-201ENST00000415434 NPATQ14207 1427 aa22.54■■□□□ 1.2
LINC01237-201ENST00000415434 HNRNPMP52272 730 aaKnown RBP eCLIP22.53■■□□□ 1.22e-9■■■■■ 31.7
LINC01237-201ENST00000415434 PLXNC1O60486 1568 aa22.53■■□□□ 1.2
LINC01237-201ENST00000415434 ATP7AQ04656 1500 aa22.52■■□□□ 1.2
LINC01237-201ENST00000415434 INO80Q9ULG1 1556 aaPredicted RBP22.52■■□□□ 1.2
LINC01237-201ENST00000415434 CFDP1Q9UEE9 299 aaPredicted RBP22.52■■□□□ 1.2
LINC01237-201ENST00000415434 MROH2AA6NES4 1674 aa22.52■■□□□ 1.2
LINC01237-201ENST00000415434 CCNB3Q8WWL7 1395 aa22.5■■□□□ 1.19
LINC01237-201ENST00000415434 NCOA1Q15788 1441 aa22.5■■□□□ 1.19
LINC01237-201ENST00000415434 MTUS2Q5JR59 1369 aa22.49■■□□□ 1.19
LINC01237-201ENST00000415434 ZMYM3Q14202 1370 aa22.48■■□□□ 1.19
LINC01237-201ENST00000415434 A2MP01023 1474 aa22.47■■□□□ 1.19
LINC01237-201ENST00000415434 TIAM1Q13009 1591 aa22.44■■□□□ 1.18
LINC01237-201ENST00000415434 SUPT6HQ7KZ85 1726 aaKnown RBP22.43■■□□□ 1.18
LINC01237-201ENST00000415434 EHBP1L1Q8N3D4 1523 aa22.43■■□□□ 1.18
LINC01237-201ENST00000415434 MBD5Q9P267 1494 aa22.43■■□□□ 1.18
LINC01237-201ENST00000415434 LTBP4Q8N2S1 1624 aa22.42■■□□□ 1.18
LINC01237-201ENST00000415434 CEP162Q5TB80 1403 aa22.41■■□□□ 1.18
LINC01237-201ENST00000415434 CAMSAP1Q5T5Y3 1602 aa22.4■■□□□ 1.18
LINC01237-201ENST00000415434 PTPRKQ15262 1439 aa22.4■■□□□ 1.18
LINC01237-201ENST00000415434 ZNF644Q9H582 1327 aaPredicted RBP22.39■■□□□ 1.18
LINC01237-201ENST00000415434 PPP6R1Q9UPN7 881 aa22.39■■□□□ 1.17
LINC01237-201ENST00000415434 IQSEC2Q5JU85 1478 aa22.39■■□□□ 1.17
LINC01237-201ENST00000415434 CLTCQ00610 1675 aaKnown RBP22.38■■□□□ 1.17
LINC01237-201ENST00000415434 RTEL1-TNFRSF6BF6WH68 1400 aa22.38■■□□□ 1.17
LINC01237-201ENST00000415434 ADGBQ8N7X0 1667 aa22.37■■□□□ 1.17
LINC01237-201ENST00000415434 ZNF142P52746 1687 aaPredicted RBP22.36■■□□□ 1.17
LINC01237-201ENST00000415434 PLA2R1Q13018 1463 aa22.36■■□□□ 1.17
LINC01237-201ENST00000415434 MYO3AQ8NEV4 1616 aa22.35■■□□□ 1.17
LINC01237-201ENST00000415434 GGT6Q6P531 493 aa22.34■■□□□ 1.17
LINC01237-201ENST00000415434 CEP170BQ9Y4F5 1589 aaPredicted RBP22.33■■□□□ 1.17
LINC01237-201ENST00000415434 TCOF1Q13428 1488 aaKnown RBP22.33■■□□□ 1.16
LINC01237-201ENST00000415434 DHX29Q7Z478 1369 aaKnown RBP22.32■■□□□ 1.16
LINC01237-201ENST00000415434 PKD2Q13563 968 aa22.3■■□□□ 1.16
LINC01237-201ENST00000415434 NCKAP5LQ9HCH0 1330 aa22.3■■□□□ 1.16
LINC01237-201ENST00000415434 NCOA2Q15596 1464 aa22.29■■□□□ 1.16
LINC01237-201ENST00000415434 CCDC141Q6ZP82 1450 aa22.29■■□□□ 1.16
LINC01237-201ENST00000415434 FAM135AQ9P2D6 1515 aa22.27■■□□□ 1.16
LINC01237-201ENST00000415434 CAMSAP2Q08AD1 1489 aa22.27■■□□□ 1.16
LINC01237-201ENST00000415434 A2ML1A8K2U0 1454 aa22.26■■□□□ 1.15
LINC01237-201ENST00000415434 ZNF335Q9H4Z2 1342 aaPredicted RBP22.25■■□□□ 1.15
LINC01237-201ENST00000415434 RSPH4AQ5TD94 716 aa22.24■■□□□ 1.15
LINC01237-201ENST00000415434 DISP3Q9P2K9 1392 aa22.23■■□□□ 1.15
LINC01237-201ENST00000415434 KDM5DQ9BY66 1539 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms