RNA–Protein interactions for RNA: ENST00000414670.2

ITGB1-203, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-203ENST00000414670 ASXL2Q76L83 1435 aa9.29□□□□□ -0.92
ITGB1-203ENST00000414670 ZNF644Q9H582 1327 aaPredicted RBP9.29□□□□□ -0.92
ITGB1-203ENST00000414670 RIMBP3CA6NJZ7 1639 aa9.28□□□□□ -0.92
ITGB1-203ENST00000414670 RIMBP3BA6NNM3 1639 aa9.28□□□□□ -0.92
ITGB1-203ENST00000414670 PTPN23Q9H3S7 1636 aa9.28□□□□□ -0.92
ITGB1-203ENST00000414670 RIMBP3Q9UFD9 1639 aa9.28□□□□□ -0.92
ITGB1-203ENST00000414670 ZNF777Q9ULD5 760 aaPredicted RBP9.28□□□□□ -0.92
ITGB1-203ENST00000414670 SCAF1Q9H7N4 1312 aaKnown RBP9.27□□□□□ -0.93
ITGB1-203ENST00000414670 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.26□□□□□ -0.931e-9■■■□□ 15
ITGB1-203ENST00000414670 PTPRKQ15262 1439 aa9.26□□□□□ -0.93
ITGB1-203ENST00000414670 PLCH2O75038 1416 aa9.25□□□□□ -0.93
ITGB1-203ENST00000414670 EFCAB2Q5VUJ9 269 aa9.25□□□□□ -0.93
ITGB1-203ENST00000414670 CAMSAP2Q08AD1 1489 aa9.25□□□□□ -0.93
ITGB1-203ENST00000414670 SETD5Q9C0A6 1442 aa9.24□□□□□ -0.93
ITGB1-203ENST00000414670 CCER1Q8TC90 406 aaPredicted RBP9.24□□□□□ -0.93
ITGB1-203ENST00000414670 TTC37Q6PGP7 1564 aa9.24□□□□□ -0.93
ITGB1-203ENST00000414670 ABCC5O15440 1437 aa9.23□□□□□ -0.93
ITGB1-203ENST00000414670 DAPK1P53355 1430 aa9.23□□□□□ -0.93
ITGB1-203ENST00000414670 ITSN2Q9NZM3 1697 aa9.23□□□□□ -0.93
ITGB1-203ENST00000414670 CHIC2Q9UKJ5 165 aa9.23□□□□□ -0.93
ITGB1-203ENST00000414670 RAB3GAP2Q9H2M9 1393 aa9.23□□□□□ -0.93
ITGB1-203ENST00000414670 ARHGAP5Q13017 1502 aa9.22□□□□□ -0.93
ITGB1-203ENST00000414670 RSPH4AQ5TD94 716 aa9.22□□□□□ -0.93
ITGB1-203ENST00000414670 HNRNPMP52272 730 aaKnown RBP eCLIP9.21□□□□□ -0.942e-7■■■□□ 17
ITGB1-203ENST00000414670 RRP7BPQ9NSQ0 103 aa9.21□□□□□ -0.94
ITGB1-203ENST00000414670 ROCK1Q13464 1354 aa9.21□□□□□ -0.94
ITGB1-203ENST00000414670 HFM1A2PYH4 1435 aa9.21□□□□□ -0.94
ITGB1-203ENST00000414670 AKNAQ7Z591 1439 aa9.21□□□□□ -0.94
ITGB1-203ENST00000414670 KIAA1107Q9UPP5 1409 aa9.21□□□□□ -0.94
ITGB1-203ENST00000414670 PLEKHH2Q8IVE3 1493 aa9.21□□□□□ -0.94
ITGB1-203ENST00000414670 MAPKBP1O60336 1514 aa9.21□□□□□ -0.94
ITGB1-203ENST00000414670 PREX2Q70Z35 1606 aa9.2□□□□□ -0.94
ITGB1-203ENST00000414670 TSPY4P0CV99 314 aa9.2□□□□□ -0.94
ITGB1-203ENST00000414670 TSPY10P0CW01 314 aa9.2□□□□□ -0.94
ITGB1-203ENST00000414670 NAIPQ13075 1403 aa9.2□□□□□ -0.94
ITGB1-203ENST00000414670 MBD5Q9P267 1494 aa9.2□□□□□ -0.94
ITGB1-203ENST00000414670 ARAP3Q8WWN8 1544 aa9.2□□□□□ -0.94
ITGB1-203ENST00000414670 DNMT1P26358 1616 aaKnown RBP9.2□□□□□ -0.94
ITGB1-203ENST00000414670 CDC42BPAQ5VT25 1732 aa9.19□□□□□ -0.94
ITGB1-203ENST00000414670 ADRA2BP18089 450 aa9.19□□□□□ -0.94
ITGB1-203ENST00000414670 CACNB1Q02641 598 aaPredicted RBP9.19□□□□□ -0.94
ITGB1-203ENST00000414670 CD109Q6YHK3 1445 aa9.19□□□□□ -0.94
ITGB1-203ENST00000414670 ABCA9Q8IUA7 1624 aa9.19□□□□□ -0.94
ITGB1-203ENST00000414670 SAMD9LQ8IVG5 1584 aa9.18□□□□□ -0.94
ITGB1-203ENST00000414670 ARHGEF5Q12774 1597 aa9.17□□□□□ -0.94
ITGB1-203ENST00000414670 FANCAO15360 1455 aa9.17□□□□□ -0.94
ITGB1-203ENST00000414670 CCDC141Q6ZP82 1450 aa9.17□□□□□ -0.94
ITGB1-203ENST00000414670 SHANK2Q9UPX8 1470 aa9.17□□□□□ -0.94
ITGB1-203ENST00000414670 C9orf84Q5VXU9 1444 aa9.17□□□□□ -0.94
ITGB1-203ENST00000414670 ANKRD30AQ9BXX3 1397 aa9.17□□□□□ -0.94
ITGB1-203ENST00000414670 ACIN1Q9UKV3 1341 aaKnown RBP9.17□□□□□ -0.94
ITGB1-203ENST00000414670 MYO5CQ9NQX4 1742 aa9.17□□□□□ -0.94
ITGB1-203ENST00000414670 ADGRL2O95490 1459 aa9.16□□□□□ -0.94
ITGB1-203ENST00000414670 NCOA1Q15788 1441 aa9.16□□□□□ -0.94
ITGB1-203ENST00000414670 DHX57Q6P158 1386 aaKnown RBP9.16□□□□□ -0.94
ITGB1-203ENST00000414670 FAM69CQ0P6D2 419 aa9.16□□□□□ -0.94
ITGB1-203ENST00000414670 CDC42BPBQ9Y5S2 1711 aa9.16□□□□□ -0.94
ITGB1-203ENST00000414670 SYCP2Q9BX26 1530 aa9.15□□□□□ -0.94
ITGB1-203ENST00000414670 ARHGEF12Q9NZN5 1544 aa9.15□□□□□ -0.94
ITGB1-203ENST00000414670 CLSPNQ9HAW4 1339 aa9.14□□□□□ -0.95
ITGB1-203ENST00000414670 ABCC1P33527 1531 aa9.14□□□□□ -0.95
ITGB1-203ENST00000414670 ADGRL1O94910 1474 aa9.14□□□□□ -0.95
ITGB1-203ENST00000414670 SCAPERQ9BY12 1400 aa9.14□□□□□ -0.95
ITGB1-203ENST00000414670 TRAPPC8Q9Y2L5 1435 aa9.14□□□□□ -0.95
ITGB1-203ENST00000414670 GLI2P10070 1586 aa9.13□□□□□ -0.95
ITGB1-203ENST00000414670 AFAP1Q8N556 730 aa9.13□□□□□ -0.95
ITGB1-203ENST00000414670 KIF15Q9NS87 1388 aa9.12□□□□□ -0.95
ITGB1-203ENST00000414670 SPAG9O60271 1321 aaKnown RBP9.12□□□□□ -0.95
ITGB1-203ENST00000414670 TRIM52Q96A61 297 aa9.12□□□□□ -0.95
ITGB1-203ENST00000414670 NEO1Q92859 1461 aa9.12□□□□□ -0.95
ITGB1-203ENST00000414670 ANKRD50Q9ULJ7 1429 aa9.11□□□□□ -0.95
ITGB1-203ENST00000414670 RTEL1-TNFRSF6BF6WH68 1400 aa9.1□□□□□ -0.95
ITGB1-203ENST00000414670 DIP2BQ9P265 1576 aa9.1□□□□□ -0.95
ITGB1-203ENST00000414670 MAST1Q9Y2H9 1570 aa9.1□□□□□ -0.95
ITGB1-203ENST00000414670 CROCC2H7BZ55 1655 aa9.1□□□□□ -0.95
ITGB1-203ENST00000414670 GCC2Q8IWJ2 1684 aa9.09□□□□□ -0.95
ITGB1-203ENST00000414670 CFAP74Q9C0B2 1584 aa9.08□□□□□ -0.96
ITGB1-203ENST00000414670 CENPBP07199 599 aaPredicted RBP9.08□□□□□ -0.96
ITGB1-203ENST00000414670 MYT1LQ9UL68 1186 aa9.08□□□□□ -0.96
ITGB1-203ENST00000414670 MAP3K4Q9Y6R4 1608 aa9.08□□□□□ -0.96
ITGB1-203ENST00000414670 DENND4BO75064 1496 aaPredicted RBP9.08□□□□□ -0.96
ITGB1-203ENST00000414670 ZNF518AQ6AHZ1 1483 aa9.08□□□□□ -0.96
ITGB1-203ENST00000414670 ADGBQ8N7X0 1667 aa9.07□□□□□ -0.96
ITGB1-203ENST00000414670 POGZQ7Z3K3 1410 aa9.07□□□□□ -0.96
ITGB1-203ENST00000414670 KDM6BO15054 1643 aa9.07□□□□□ -0.96
ITGB1-203ENST00000414670 MPHOSPH9Q99550 1183 aa9.07□□□□□ -0.96
ITGB1-203ENST00000414670 TEX14Q8IWB6 1497 aa9.07□□□□□ -0.96
ITGB1-203ENST00000414670 RAPGEF3O95398 923 aa9.06□□□□□ -0.96
ITGB1-203ENST00000414670 ZFYVE16Q7Z3T8 1539 aa9.05□□□□□ -0.96
ITGB1-203ENST00000414670 DUOX2Q9NRD8 1548 aa9.05□□□□□ -0.96
ITGB1-203ENST00000414670 PLXNC1O60486 1568 aa9.05□□□□□ -0.96
ITGB1-203ENST00000414670 NUP155O75694 1391 aa9.05□□□□□ -0.96
ITGB1-203ENST00000414670 SLC4A1APQ9BWU0 796 aaKnown RBP9.05□□□□□ -0.96
ITGB1-203ENST00000414670 ATP7AQ04656 1500 aa9.05□□□□□ -0.96
ITGB1-203ENST00000414670 ERBINQ96RT1 1412 aa9.05□□□□□ -0.96
ITGB1-203ENST00000414670 MLH3Q9UHC1 1453 aa9.04□□□□□ -0.96
ITGB1-203ENST00000414670 DHX29Q7Z478 1369 aaKnown RBP9.03□□□□□ -0.96
ITGB1-203ENST00000414670 SOCS7O14512 581 aa9.03□□□□□ -0.96
ITGB1-203ENST00000414670 KDM5CP41229 1560 aa9.03□□□□□ -0.96
ITGB1-203ENST00000414670 INO80Q9ULG1 1556 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms