RNA–Protein interactions for RNA: ENST00000413693.5

NEB-205, Transcript of nebulin, humanhuman

TSL 5

Gene NEB, Length 9,443 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-205ENST00000413693 ITGAEP38570 1179 aa8.46□□□□□ -1.05
NEB-205ENST00000413693 CREBRFQ8IUR6 639 aa8.46□□□□□ -1.06
NEB-205ENST00000413693 PHLDB1Q86UU1 1377 aa8.46□□□□□ -1.06
NEB-205ENST00000413693 MRS2Q9HD23 443 aa8.45□□□□□ -1.06
NEB-205ENST00000413693 RDXP35241 583 aaKnown RBP8.45□□□□□ -1.06
NEB-205ENST00000413693 TRIM52Q96A61 297 aa8.44□□□□□ -1.06
NEB-205ENST00000413693 PAIP2Q9BPZ3 127 aaKnown RBP8.44□□□□□ -1.06
NEB-205ENST00000413693 GTPBP4Q9BZE4 634 aaKnown RBP8.44□□□□□ -1.06
NEB-205ENST00000413693 AAMPQ13685 434 aa8.43□□□□□ -1.06
NEB-205ENST00000413693 PSMD1Q99460 953 aa8.43□□□□□ -1.06
NEB-205ENST00000413693 SETSIPP0DME0 302 aa8.43□□□□□ -1.06
NEB-205ENST00000413693 PATL2C9JE40 543 aaKnown RBP8.42□□□□□ -1.06
NEB-205ENST00000413693 SALL2Q9Y467 1007 aaPredicted RBP8.42□□□□□ -1.06
NEB-205ENST00000413693 MCM5P33992 734 aa8.41□□□□□ -1.06
NEB-205ENST00000413693 AK7Q96M32 723 aa8.41□□□□□ -1.06
NEB-205ENST00000413693 MAPK8IP3Q9UPT6 1336 aa8.41□□□□□ -1.06
NEB-205ENST00000413693 HMMRO75330 724 aa8.4□□□□□ -1.06
NEB-205ENST00000413693 HSP90AB1P08238 724 aaKnown RBP8.4□□□□□ -1.06
NEB-205ENST00000413693 ZNF622Q969S3 477 aaKnown RBP eCLIP8.4□□□□□ -1.06
NEB-205ENST00000413693 TERF1P54274 439 aa8.4□□□□□ -1.06
NEB-205ENST00000413693 FAM193AP78312 1265 aa8.4□□□□□ -1.06
NEB-205ENST00000413693 KIF16BQ96L93 1317 aa8.4□□□□□ -1.06
NEB-205ENST00000413693 RNF20Q5VTR2 975 aa8.4□□□□□ -1.06
NEB-205ENST00000413693 DDX10Q13206 875 aaKnown RBP8.4□□□□□ -1.07
NEB-205ENST00000413693 CCDC173Q0VFZ6 552 aa8.4□□□□□ -1.07
NEB-205ENST00000413693 PDE3BQ13370 1112 aa8.4□□□□□ -1.07
NEB-205ENST00000413693 BBXQ8WY36 941 aaPredicted RBP8.39□□□□□ -1.07
NEB-205ENST00000413693 CCDC39Q9UFE4 941 aa8.39□□□□□ -1.07
NEB-205ENST00000413693 SMAP1Q8IYB5 467 aaPredicted RBP8.39□□□□□ -1.07
NEB-205ENST00000413693 FAM13BQ9NYF5 915 aa8.39□□□□□ -1.07
NEB-205ENST00000413693 DYNC1I1O14576 645 aa8.38□□□□□ -1.07
NEB-205ENST00000413693 PLCD4Q9BRC7 762 aa8.38□□□□□ -1.07
NEB-205ENST00000413693 TPM4P67936 248 aa8.38□□□□□ -1.07
NEB-205ENST00000413693 HAP1P54257 671 aaPredicted RBP8.38□□□□□ -1.07
NEB-205ENST00000413693 KNSTRNQ9Y448 316 aa8.38□□□□□ -1.07
NEB-205ENST00000413693 TULP1O00294 542 aaPredicted RBP8.38□□□□□ -1.07
NEB-205ENST00000413693 CAGE1Q8TC20 777 aa8.38□□□□□ -1.07
NEB-205ENST00000413693 EIF4G2P78344 907 aaKnown RBP eCLIP8.38□□□□□ -1.07
NEB-205ENST00000413693 INCENPQ9NQS7 918 aa8.37□□□□□ -1.07
NEB-205ENST00000413693 CCDC70Q6NSX1 233 aa8.37□□□□□ -1.07
NEB-205ENST00000413693 CCDC191Q8NCU4 936 aa8.37□□□□□ -1.07
NEB-205ENST00000413693 GOLGA6L10A6NI86 522 aa8.36□□□□□ -1.07
NEB-205ENST00000413693 ERCC4Q92889 916 aaPredicted RBP8.36□□□□□ -1.07
NEB-205ENST00000413693 ATP6V1DQ9Y5K8 247 aa8.36□□□□□ -1.07
NEB-205ENST00000413693 DCTN1Q14203 1278 aa8.36□□□□□ -1.07
NEB-205ENST00000413693 CDR1P51861 262 aa8.36□□□□□ -1.07
NEB-205ENST00000413693 CCDC34Q96HJ3 373 aa8.36□□□□□ -1.07
NEB-205ENST00000413693 LIG1P18858 919 aa8.36□□□□□ -1.07
NEB-205ENST00000413693 FGD1P98174 961 aa8.36□□□□□ -1.07
NEB-205ENST00000413693 LEKR1Q6ZMV7 388 aa8.36□□□□□ -1.07
NEB-205ENST00000413693 DDX11Q96FC9 970 aa8.36□□□□□ -1.07
NEB-205ENST00000413693 POLR3GO15318 223 aaPredicted RBP8.35□□□□□ -1.07
NEB-205ENST00000413693 CCP110O43303 1012 aa8.35□□□□□ -1.07
NEB-205ENST00000413693 MCCP23508 829 aa8.35□□□□□ -1.07
NEB-205ENST00000413693 TIGD1Q96MW7 591 aa8.35□□□□□ -1.07
NEB-205ENST00000413693 FTSJ3Q8IY81 847 aaKnown RBP8.35□□□□□ -1.07
NEB-205ENST00000413693 HSP90B2PQ58FF3 399 aa8.35□□□□□ -1.07
NEB-205ENST00000413693 CENPJQ9HC77 1338 aaPredicted RBP8.34□□□□□ -1.07
NEB-205ENST00000413693 HSPA5P11021 654 aaKnown RBP8.34□□□□□ -1.07
NEB-205ENST00000413693 FAM9BQ8IZU0 186 aa8.34□□□□□ -1.07
NEB-205ENST00000413693 CHMP4CQ96CF2 233 aa8.34□□□□□ -1.07
NEB-205ENST00000413693 CHMP3Q9Y3E7 222 aa8.34□□□□□ -1.07
NEB-205ENST00000413693 FAM50AQ14320 339 aaKnown RBP8.34□□□□□ -1.07
NEB-205ENST00000413693 IL27Q8NEV9 243 aa8.34□□□□□ -1.07
NEB-205ENST00000413693 WDR43Q15061 677 aaKnown RBP eCLIP8.34□□□□□ -1.08
NEB-205ENST00000413693 NINLQ9Y2I6 1382 aa8.33□□□□□ -1.08
NEB-205ENST00000413693 EIF3AQ14152 1382 aaKnown RBP8.33□□□□□ -1.08
NEB-205ENST00000413693 TPM1P09493 284 aa8.33□□□□□ -1.08
NEB-205ENST00000413693 SARNPP82979 210 aaKnown RBP8.33□□□□□ -1.08
NEB-205ENST00000413693 KIF2AO00139 706 aaPredicted RBP8.33□□□□□ -1.08
NEB-205ENST00000413693 NGEFQ8N5V2 710 aa8.33□□□□□ -1.08
NEB-205ENST00000413693 ABCC9O60706 1549 aa8.33□□□□□ -1.08
NEB-205ENST00000413693 CLCN1P35523 988 aa8.33□□□□□ -1.08
NEB-205ENST00000413693 ZBED9Q6R2W3 1325 aa8.32□□□□□ -1.08
NEB-205ENST00000413693 DRC7Q8IY82 874 aa8.32□□□□□ -1.08
NEB-205ENST00000413693 ESPNB1AK53 854 aa8.32□□□□□ -1.08
NEB-205ENST00000413693 IPO4Q8TEX9 1081 aaKnown RBP8.32□□□□□ -1.08
NEB-205ENST00000413693 FAM161AQ3B820 660 aa8.32□□□□□ -1.08
NEB-205ENST00000413693 HS1BP3Q53T59 392 aa8.32□□□□□ -1.08
NEB-205ENST00000413693 KTN1Q86UP2 1357 aaKnown RBP8.31□□□□□ -1.08
NEB-205ENST00000413693 SH3BGRP55822 239 aaPredicted RBP8.31□□□□□ -1.08
NEB-205ENST00000413693 CENPQQ7L2Z9 268 aaPredicted RBP8.31□□□□□ -1.08
NEB-205ENST00000413693 GOLGA6L7A0A1B0GV03 622 aa8.31□□□□□ -1.08
NEB-205ENST00000413693 TMX4Q9H1E5 349 aaPredicted RBP8.31□□□□□ -1.08
NEB-205ENST00000413693 ROCK2O75116 1388 aaKnown RBP8.31□□□□□ -1.08
NEB-205ENST00000413693 RBM10P98175 930 aaKnown RBP8.31□□□□□ -1.08
NEB-205ENST00000413693 CDCA8Q53HL2 280 aa8.3□□□□□ -1.08
NEB-205ENST00000413693 NBPF1Q3BBV0 1214 aa8.3□□□□□ -1.08
NEB-205ENST00000413693 PRIMPOLQ96LW4 560 aa8.3□□□□□ -1.08
NEB-205ENST00000413693 NAP1L2Q9ULW6 460 aaPredicted RBP8.3□□□□□ -1.08
NEB-205ENST00000413693 ZSCAN30Q86W11 494 aa8.3□□□□□ -1.08
NEB-205ENST00000413693 CCDC91Q7Z6B0 441 aa8.3□□□□□ -1.08
NEB-205ENST00000413693 CHMP5Q9NZZ3 219 aa8.3□□□□□ -1.08
NEB-205ENST00000413693 FAM184AQ8NB25 1140 aa8.3□□□□□ -1.08
NEB-205ENST00000413693 KIAA1328Q86T90 577 aa8.29□□□□□ -1.08
NEB-205ENST00000413693 HIRIP3Q9BW71 556 aaPredicted RBP8.29□□□□□ -1.08
NEB-205ENST00000413693 ZRSR2Q15696 482 aaKnown RBP8.29□□□□□ -1.08
NEB-205ENST00000413693 U2SURPO15042 1029 aaKnown RBP8.29□□□□□ -1.08
NEB-205ENST00000413693 GIMAP7Q8NHV1 300 aa8.29□□□□□ -1.08
NEB-205ENST00000413693 B4GALNT3Q6L9W6 998 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms