RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 EHBP1L1Q8N3D4 1523 aa12.28□□□□□ -0.44
SIK3-202ENST00000413553 MYT1LQ9UL68 1186 aa12.27□□□□□ -0.45
SIK3-202ENST00000413553 DEKP35659 375 aaKnown RBP12.26□□□□□ -0.45
SIK3-202ENST00000413553 SUPT6HQ7KZ85 1726 aaKnown RBP12.26□□□□□ -0.45
SIK3-202ENST00000413553 B4GALNT3Q6L9W6 998 aa12.25□□□□□ -0.45
SIK3-202ENST00000413553 MAGI3Q5TCQ9 1506 aa12.25□□□□□ -0.45
SIK3-202ENST00000413553 FGD6Q6ZV73 1430 aa12.25□□□□□ -0.45
SIK3-202ENST00000413553 ERICH6BQ5W0A0 696 aa12.24□□□□□ -0.45
SIK3-202ENST00000413553 MYOM3Q5VTT5 1437 aa12.24□□□□□ -0.45
SIK3-202ENST00000413553 UACAQ9BZF9 1416 aa12.23□□□□□ -0.45
SIK3-202ENST00000413553 FAM9BQ8IZU0 186 aa12.23□□□□□ -0.45
SIK3-202ENST00000413553 ERCC6L2Q5T890 1561 aa12.22□□□□□ -0.45
SIK3-202ENST00000413553 NBR1Q14596 966 aa12.22□□□□□ -0.45
SIK3-202ENST00000413553 ZNF777Q9ULD5 760 aaPredicted RBP12.22□□□□□ -0.45
SIK3-202ENST00000413553 WASHC2AQ641Q2 1341 aa12.22□□□□□ -0.45
SIK3-202ENST00000413553 HSPA5P11021 654 aaKnown RBP12.22□□□□□ -0.45
SIK3-202ENST00000413553 CLASP1Q7Z460 1538 aa12.21□□□□□ -0.45
SIK3-202ENST00000413553 SHROOM2Q13796 1616 aa12.21□□□□□ -0.45
SIK3-202ENST00000413553 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.21□□□□□ -0.45
SIK3-202ENST00000413553 PTPN23Q9H3S7 1636 aa12.21□□□□□ -0.45
SIK3-202ENST00000413553 CCDC184Q52MB2 194 aa12.2□□□□□ -0.46
SIK3-202ENST00000413553 TROQ12816 1431 aaPredicted RBP12.2□□□□□ -0.46
SIK3-202ENST00000413553 ABCA8O94911 1581 aa12.2□□□□□ -0.46
SIK3-202ENST00000413553 ATP10BO94823 1461 aa12.2□□□□□ -0.46
SIK3-202ENST00000413553 CFDP1Q9UEE9 299 aaPredicted RBP12.2□□□□□ -0.46
SIK3-202ENST00000413553 NOP58Q9Y2X3 529 aaKnown RBP12.2□□□□□ -0.46
SIK3-202ENST00000413553 CHIC2Q9UKJ5 165 aa12.19□□□□□ -0.46
SIK3-202ENST00000413553 HFM1A2PYH4 1435 aa12.19□□□□□ -0.46
SIK3-202ENST00000413553 MRS2Q9HD23 443 aa12.18□□□□□ -0.46
SIK3-202ENST00000413553 PTPRKQ15262 1439 aa12.17□□□□□ -0.46
SIK3-202ENST00000413553 CNTLNQ9NXG0 1405 aa12.17□□□□□ -0.46
SIK3-202ENST00000413553 EIF4G2P78344 907 aaKnown RBP eCLIP12.17□□□□□ -0.46
SIK3-202ENST00000413553 KDM5BQ9UGL1 1544 aa12.16□□□□□ -0.46
SIK3-202ENST00000413553 NAIPQ13075 1403 aa12.15□□□□□ -0.46
SIK3-202ENST00000413553 ZNF644Q9H582 1327 aaPredicted RBP12.15□□□□□ -0.46
SIK3-202ENST00000413553 ARHGEF11O15085 1522 aa12.15□□□□□ -0.46
SIK3-202ENST00000413553 MIA2Q96PC5 1412 aa12.15□□□□□ -0.47
SIK3-202ENST00000413553 ZBED9Q6R2W3 1325 aa12.15□□□□□ -0.47
SIK3-202ENST00000413553 PAK3O75914 559 aaPredicted RBP12.14□□□□□ -0.47
SIK3-202ENST00000413553 RRP7BPQ9NSQ0 103 aa12.14□□□□□ -0.47
SIK3-202ENST00000413553 PRKRIP1Q9H875 184 aaPredicted RBP12.14□□□□□ -0.47
SIK3-202ENST00000413553 ABCC2Q92887 1545 aa12.13□□□□□ -0.47
SIK3-202ENST00000413553 NPM1P06748 294 aaKnown RBP eCLIP12.12□□□□□ -0.47
SIK3-202ENST00000413553 KIF14Q15058 1648 aa12.11□□□□□ -0.47
SIK3-202ENST00000413553 ANP32AP39687 249 aaKnown RBP12.11□□□□□ -0.47
SIK3-202ENST00000413553 RTL5Q5HYW3 569 aaPredicted RBP12.11□□□□□ -0.47
SIK3-202ENST00000413553 CNGB1Q14028 1251 aaPredicted RBP12.1□□□□□ -0.47
SIK3-202ENST00000413553 GPATCH8Q9UKJ3 1502 aaKnown RBP12.1□□□□□ -0.47
SIK3-202ENST00000413553 CCDC7Q96M83 1385 aa12.09□□□□□ -0.47
SIK3-202ENST00000413553 C11orf95C9JLR9 678 aaPredicted RBP12.09□□□□□ -0.47
SIK3-202ENST00000413553 CCDC136Q96JN2 1154 aa12.09□□□□□ -0.47
SIK3-202ENST00000413553 AKNAQ7Z591 1439 aa12.08□□□□□ -0.48
SIK3-202ENST00000413553 TCOF1Q13428 1488 aaKnown RBP12.07□□□□□ -0.48
SIK3-202ENST00000413553 PRKCSHP14314 528 aaPredicted RBP12.07□□□□□ -0.48
SIK3-202ENST00000413553 NCOA1Q15788 1441 aa12.06□□□□□ -0.48
SIK3-202ENST00000413553 TSPY4P0CV99 314 aa12.06□□□□□ -0.48
SIK3-202ENST00000413553 TSPY10P0CW01 314 aa12.06□□□□□ -0.48
SIK3-202ENST00000413553 L3MBTL2Q969R5 705 aa12.06□□□□□ -0.48
SIK3-202ENST00000413553 ZBTB47Q9UFB7 747 aaPredicted RBP12.06□□□□□ -0.48
SIK3-202ENST00000413553 IPO9Q96P70 1041 aaKnown RBP12.06□□□□□ -0.48
SIK3-202ENST00000413553 ITSN2Q9NZM3 1697 aa12.06□□□□□ -0.48
SIK3-202ENST00000413553 UHRF1BP1LA0JNW5 1464 aa12.05□□□□□ -0.48
SIK3-202ENST00000413553 ADCY10Q96PN6 1610 aa12.05□□□□□ -0.48
SIK3-202ENST00000413553 CAMSAP2Q08AD1 1489 aa12.05□□□□□ -0.48
SIK3-202ENST00000413553 HNRNPMP52272 730 aaKnown RBP eCLIP12.05□□□□□ -0.48
SIK3-202ENST00000413553 FOXD1Q16676 465 aa12.05□□□□□ -0.48
SIK3-202ENST00000413553 CYB5RLQ6IPT4 315 aa12.05□□□□□ -0.48
SIK3-202ENST00000413553 GCC2Q8IWJ2 1684 aa12.04□□□□□ -0.48
SIK3-202ENST00000413553 DAPK1P53355 1430 aa12.04□□□□□ -0.48
SIK3-202ENST00000413553 SENP3-EIF4A1A0A087X0R7 540 aa12.04□□□□□ -0.48
SIK3-202ENST00000413553 ABCC10Q5T3U5 1492 aa12.03□□□□□ -0.48
SIK3-202ENST00000413553 ZCCHC11Q5TAX3 1644 aaKnown RBP12.03□□□□□ -0.48
SIK3-202ENST00000413553 POLR3GLQ9BT43 218 aa12.03□□□□□ -0.48
SIK3-202ENST00000413553 DENND4BO75064 1496 aaPredicted RBP12.02□□□□□ -0.48
SIK3-202ENST00000413553 ABCC5O15440 1437 aa12.02□□□□□ -0.48
SIK3-202ENST00000413553 KIF7Q2M1P5 1343 aa12.02□□□□□ -0.48
SIK3-202ENST00000413553 KDM6BO15054 1643 aa12.02□□□□□ -0.49
SIK3-202ENST00000413553 NUDCQ9Y266 331 aa12.02□□□□□ -0.49
SIK3-202ENST00000413553 SMG6Q86US8 1419 aaKnown RBP12.02□□□□□ -0.49
SIK3-202ENST00000413553 MPHOSPH9Q99550 1183 aa12.02□□□□□ -0.49
SIK3-202ENST00000413553 POLR1AO95602 1720 aaPredicted RBP12.01□□□□□ -0.49
SIK3-202ENST00000413553 ARHGAP5Q13017 1502 aa12.01□□□□□ -0.49
SIK3-202ENST00000413553 CDC42BPAQ5VT25 1732 aa12□□□□□ -0.49
SIK3-202ENST00000413553 NPM2Q86SE8 214 aaKnown RBP12□□□□□ -0.49
SIK3-202ENST00000413553 EFCAB2Q5VUJ9 269 aa12□□□□□ -0.49
SIK3-202ENST00000413553 ANO8Q9HCE9 1232 aaPredicted RBP12□□□□□ -0.49
SIK3-202ENST00000413553 NBPF8Q3BBV2 869 aa11.99□□□□□ -0.49
SIK3-202ENST00000413553 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.99□□□□□ -0.49
SIK3-202ENST00000413553 DNMT1P26358 1616 aaKnown RBP11.98□□□□□ -0.49
SIK3-202ENST00000413553 ANKRD30AQ9BXX3 1397 aa11.98□□□□□ -0.49
SIK3-202ENST00000413553 RSPH4AQ5TD94 716 aa11.97□□□□□ -0.49
SIK3-202ENST00000413553 WDR7Q9Y4E6 1490 aa11.97□□□□□ -0.49
SIK3-202ENST00000413553 TTC37Q6PGP7 1564 aa11.97□□□□□ -0.49
SIK3-202ENST00000413553 ROCK1Q13464 1354 aa11.97□□□□□ -0.49
SIK3-202ENST00000413553 ASXL2Q76L83 1435 aa11.97□□□□□ -0.49
SIK3-202ENST00000413553 RTN4Q9NQC3 1192 aaKnown RBP11.97□□□□□ -0.49
SIK3-202ENST00000413553 IL27Q8NEV9 243 aa11.95□□□□□ -0.5
SIK3-202ENST00000413553 PLCH2O75038 1416 aa11.95□□□□□ -0.5
SIK3-202ENST00000413553 LAS1LQ9Y4W2 734 aaKnown RBP11.95□□□□□ -0.5
SIK3-202ENST00000413553 C9orf84Q5VXU9 1444 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms