RNA–Protein interactions for RNA: ENST00000413184.6

CPSF7-203, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-203ENST00000413184 RICTORQ6R327 1708 aa13.36□□□□□ -0.27
CPSF7-203ENST00000413184 DISP1Q96F81 1524 aa13.36□□□□□ -0.27
CPSF7-203ENST00000413184 CPS1P31327 1500 aa13.34□□□□□ -0.27
CPSF7-203ENST00000413184 PPP6R1Q9UPN7 881 aa13.34□□□□□ -0.27
CPSF7-203ENST00000413184 ABCA9Q8IUA7 1624 aa13.34□□□□□ -0.27
CPSF7-203ENST00000413184 IQGAP2Q13576 1575 aa13.33□□□□□ -0.28
CPSF7-203ENST00000413184 ALKQ9UM73 1620 aa13.33□□□□□ -0.28
CPSF7-203ENST00000413184 TRIM52Q96A61 297 aa13.33□□□□□ -0.28
CPSF7-203ENST00000413184 TRAPPC8Q9Y2L5 1435 aa13.32□□□□□ -0.28
CPSF7-203ENST00000413184 PKD2Q13563 968 aa13.32□□□□□ -0.28
CPSF7-203ENST00000413184 FHOD3Q2V2M9 1422 aa13.31□□□□□ -0.28
CPSF7-203ENST00000413184 C3P01024 1663 aa13.31□□□□□ -0.28
CPSF7-203ENST00000413184 FOXD1Q16676 465 aa13.3□□□□□ -0.28
CPSF7-203ENST00000413184 ZRANB1Q9UGI0 708 aa13.3□□□□□ -0.28
CPSF7-203ENST00000413184 BIVM-ERCC5R4GMW8 1640 aa13.3□□□□□ -0.28
CPSF7-203ENST00000413184 ZMYM4Q5VZL5 1548 aa13.29□□□□□ -0.28
CPSF7-203ENST00000413184 MAGI2Q86UL8 1455 aa13.27□□□□□ -0.29
CPSF7-203ENST00000413184 SETBP1Q9Y6X0 1596 aa13.26□□□□□ -0.29
CPSF7-203ENST00000413184 PLA2R1Q13018 1463 aa13.23□□□□□ -0.29
CPSF7-203ENST00000413184 SHANK2Q9UPX8 1470 aa13.23□□□□□ -0.29
CPSF7-203ENST00000413184 C9orf84Q5VXU9 1444 aa13.23□□□□□ -0.29
CPSF7-203ENST00000413184 SUPT6HQ7KZ85 1726 aaKnown RBP13.23□□□□□ -0.29
CPSF7-203ENST00000413184 ESF1Q9H501 851 aaKnown RBP13.23□□□□□ -0.29
CPSF7-203ENST00000413184 ATP10AO60312 1499 aa13.23□□□□□ -0.29
CPSF7-203ENST00000413184 TCOF1Q13428 1488 aaKnown RBP13.22□□□□□ -0.29
CPSF7-203ENST00000413184 HECW1Q76N89 1606 aa13.21□□□□□ -0.29
CPSF7-203ENST00000413184 ARID3CA6NKF2 412 aa13.2□□□□□ -0.3
CPSF7-203ENST00000413184 LRRC7Q96NW7 1537 aa13.19□□□□□ -0.3
CPSF7-203ENST00000413184 RAPGEF2Q9Y4G8 1499 aa13.19□□□□□ -0.3
CPSF7-203ENST00000413184 ABCA8O94911 1581 aa13.19□□□□□ -0.3
CPSF7-203ENST00000413184 IGF1RP08069 1367 aa13.18□□□□□ -0.3
CPSF7-203ENST00000413184 YY1P25490 414 aa13.16□□□□□ -0.3
CPSF7-203ENST00000413184 UGGT2Q9NYU1 1516 aa13.16□□□□□ -0.3
CPSF7-203ENST00000413184 RNF17Q9BXT8 1623 aaKnown RBP13.15□□□□□ -0.3
CPSF7-203ENST00000413184 CFAP74Q9C0B2 1584 aa13.15□□□□□ -0.3
CPSF7-203ENST00000413184 ZNF772Q68DY9 489 aaPredicted RBP13.14□□□□□ -0.31
CPSF7-203ENST00000413184 SENP3-EIF4A1A0A087X0R7 540 aa13.13□□□□□ -0.31
CPSF7-203ENST00000413184 RXRBP28702 533 aa13.13□□□□□ -0.31
CPSF7-203ENST00000413184 NPATQ14207 1427 aa13.11□□□□□ -0.31
CPSF7-203ENST00000413184 ZNF142P52746 1687 aaPredicted RBP13.11□□□□□ -0.31
CPSF7-203ENST00000413184 CARMIL1Q5VZK9 1371 aa13.08□□□□□ -0.31
CPSF7-203ENST00000413184 CEP170BQ9Y4F5 1589 aaPredicted RBP13.08□□□□□ -0.32
CPSF7-203ENST00000413184 ATP10BO94823 1461 aa13.08□□□□□ -0.32
CPSF7-203ENST00000413184 MYO3AQ8NEV4 1616 aa13.07□□□□□ -0.32
CPSF7-203ENST00000413184 CDK12Q9NYV4 1490 aaPredicted RBP13.07□□□□□ -0.32
CPSF7-203ENST00000413184 VWDEQ8N2E2 1590 aa13.07□□□□□ -0.32
CPSF7-203ENST00000413184 RAPGEF6Q8TEU7 1601 aa13.06□□□□□ -0.32
CPSF7-203ENST00000413184 LRP5O75197 1615 aa13.06□□□□□ -0.32
CPSF7-203ENST00000413184 CNTLNQ9NXG0 1405 aa13.05□□□□□ -0.32
CPSF7-203ENST00000413184 NUTM2BA6NNL0 878 aaPredicted RBP13.05□□□□□ -0.32
CPSF7-203ENST00000413184 NUTM2EB1AL46 878 aaPredicted RBP13.05□□□□□ -0.32
CPSF7-203ENST00000413184 MEX3CQ5U5Q3 659 aaKnown RBP13.05□□□□□ -0.32
CPSF7-203ENST00000413184 NUTM2DQ5VT03 806 aaPredicted RBP13.05□□□□□ -0.32
CPSF7-203ENST00000413184 NUTM2AQ8IVF1 878 aaPredicted RBP13.05□□□□□ -0.32
CPSF7-203ENST00000413184 POLR1AO95602 1720 aaPredicted RBP13.05□□□□□ -0.32
CPSF7-203ENST00000413184 SCAPERQ9BY12 1400 aa13.03□□□□□ -0.32
CPSF7-203ENST00000413184 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.02□□□□□ -0.33
CPSF7-203ENST00000413184 HNRNPUL2Q1KMD3 747 aaKnown RBP13.02□□□□□ -0.33
CPSF7-203ENST00000413184 KIF27Q86VH2 1401 aa13.02□□□□□ -0.33
CPSF7-203ENST00000413184 MYT1LQ9UL68 1186 aa13.01□□□□□ -0.33
CPSF7-203ENST00000413184 FAM135BQ49AJ0 1406 aa13.01□□□□□ -0.33
CPSF7-203ENST00000413184 AGLP35573 1532 aa13.01□□□□□ -0.33
CPSF7-203ENST00000413184 NEURL4Q96JN8 1562 aa13.01□□□□□ -0.33
CPSF7-203ENST00000413184 SYNMO15061 1565 aa13□□□□□ -0.33
CPSF7-203ENST00000413184 FAM9AQ8IZU1 332 aaPredicted RBP12.98□□□□□ -0.33
CPSF7-203ENST00000413184 ZMYM3Q14202 1370 aa12.97□□□□□ -0.33
CPSF7-203ENST00000413184 JCADQ9P266 1359 aa12.97□□□□□ -0.33
CPSF7-203ENST00000413184 MROH2AA6NES4 1674 aa12.97□□□□□ -0.33
CPSF7-203ENST00000413184 GOLGA3Q08378 1498 aa12.97□□□□□ -0.33
CPSF7-203ENST00000413184 ATAD2Q6PL18 1390 aa12.96□□□□□ -0.33
CPSF7-203ENST00000413184 STRCP1A6NGW2 1772 aa12.96□□□□□ -0.34
CPSF7-203ENST00000413184 RGS12O14924 1447 aa12.96□□□□□ -0.34
CPSF7-203ENST00000413184 CDK13Q14004 1512 aaKnown RBP12.95□□□□□ -0.34
CPSF7-203ENST00000413184 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.95□□□□□ -0.34
CPSF7-203ENST00000413184 REREQ9P2R6 1566 aa12.94□□□□□ -0.34
CPSF7-203ENST00000413184 ROBO1Q9Y6N7 1651 aa12.93□□□□□ -0.34
CPSF7-203ENST00000413184 LRP6O75581 1613 aa12.93□□□□□ -0.34
CPSF7-203ENST00000413184 DNMT1P26358 1616 aaKnown RBP12.93□□□□□ -0.34
CPSF7-203ENST00000413184 DIP2CQ9Y2E4 1556 aa12.93□□□□□ -0.34
CPSF7-203ENST00000413184 A2ML1A8K2U0 1454 aa12.91□□□□□ -0.34
CPSF7-203ENST00000413184 ANKLE2Q86XL3 938 aa12.91□□□□□ -0.34
CPSF7-203ENST00000413184 NPHP4O75161 1426 aaPredicted RBP12.89□□□□□ -0.35
CPSF7-203ENST00000413184 PHLPP1O60346 1717 aa12.89□□□□□ -0.35
CPSF7-203ENST00000413184 SLC34A2O95436 690 aa12.89□□□□□ -0.35
CPSF7-203ENST00000413184 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.89□□□□□ -0.35
CPSF7-203ENST00000413184 SPATA31A6Q5VVP1 1343 aa12.88□□□□□ -0.35
CPSF7-203ENST00000413184 ZNF518AQ6AHZ1 1483 aa12.87□□□□□ -0.35
CPSF7-203ENST00000413184 RBM6P78332 1123 aaKnown RBP12.86□□□□□ -0.35
CPSF7-203ENST00000413184 ABCA6Q8N139 1617 aa12.86□□□□□ -0.35
CPSF7-203ENST00000413184 C1QTNF8P60827 252 aa12.85□□□□□ -0.35
CPSF7-203ENST00000413184 NHSL1Q5SYE7 1610 aa12.84□□□□□ -0.35
CPSF7-203ENST00000413184 IQGAP1P46940 1657 aa12.84□□□□□ -0.35
CPSF7-203ENST00000413184 CLTCQ00610 1675 aaKnown RBP12.84□□□□□ -0.35
CPSF7-203ENST00000413184 PLEKHD1A6NEE1 506 aa12.84□□□□□ -0.35
CPSF7-203ENST00000413184 CCDC125Q86Z20 511 aa12.84□□□□□ -0.35
CPSF7-203ENST00000413184 AFAP1Q8N556 730 aa12.84□□□□□ -0.35
CPSF7-203ENST00000413184 XIRP1Q702N8 1843 aaKnown RBP12.83□□□□□ -0.35
CPSF7-203ENST00000413184 MED14O60244 1454 aa12.83□□□□□ -0.36
CPSF7-203ENST00000413184 AFF2P51816 1311 aa12.83□□□□□ -0.36
CPSF7-203ENST00000413184 KDM5CP41229 1560 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms