RNA–Protein interactions for RNA: ENST00000413013.6

SMIM29-203, Transcript of small integral membrane protein 29, humanhuman

TSL 2

Gene SMIM29, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM29-203ENST00000413013 SCAPERQ9BY12 1400 aa29.02■■■□□ 2.24
SMIM29-203ENST00000413013 KIF14Q15058 1648 aa29.01■■■□□ 2.23
SMIM29-203ENST00000413013 CDK11AQ9UQ88 783 aaPredicted RBP29■■■□□ 2.23
SMIM29-203ENST00000413013 FER1L4A9Z1Z3 1794 aa29■■■□□ 2.23
SMIM29-203ENST00000413013 SIGLEC1Q9BZZ2 1709 aa28.99■■■□□ 2.23
SMIM29-203ENST00000413013 ARHGAP35Q9NRY4 1499 aa28.98■■■□□ 2.23
SMIM29-203ENST00000413013 EHMT2Q96KQ7 1210 aa28.98■■■□□ 2.23
SMIM29-203ENST00000413013 PLPPR3Q6T4P5 718 aa28.94■■■□□ 2.22
SMIM29-203ENST00000413013 CLIP1P30622 1438 aa28.94■■■□□ 2.22
SMIM29-203ENST00000413013 EFCAB2Q5VUJ9 269 aa28.93■■■□□ 2.22
SMIM29-203ENST00000413013 C9orf84Q5VXU9 1444 aa28.93■■■□□ 2.22
SMIM29-203ENST00000413013 MLECQ14165 292 aa28.91■■■□□ 2.22
SMIM29-203ENST00000413013 ATP10AO60312 1499 aa28.91■■■□□ 2.22
SMIM29-203ENST00000413013 ARHGAP5Q13017 1502 aa28.9■■■□□ 2.22
SMIM29-203ENST00000413013 TROQ12816 1431 aaPredicted RBP28.9■■■□□ 2.22
SMIM29-203ENST00000413013 ZNF518AQ6AHZ1 1483 aa28.9■■■□□ 2.22
SMIM29-203ENST00000413013 ARHGEF12Q9NZN5 1544 aa28.87■■■□□ 2.21
SMIM29-203ENST00000413013 HSPA2P54652 639 aa28.84■■■□□ 2.21
SMIM29-203ENST00000413013 KDM5CP41229 1560 aa28.84■■■□□ 2.21
SMIM29-203ENST00000413013 LRRIQ1Q96JM4 1722 aa28.82■■■□□ 2.2
SMIM29-203ENST00000413013 PREX1Q8TCU6 1659 aa28.8■■■□□ 2.2
SMIM29-203ENST00000413013 CCDC18Q5T9S5 1454 aa28.78■■■□□ 2.2
SMIM29-203ENST00000413013 CHIC1Q5VXU3 224 aa28.77■■■□□ 2.2
SMIM29-203ENST00000413013 MYT1LQ9UL68 1186 aa28.77■■■□□ 2.2
SMIM29-203ENST00000413013 PREX2Q70Z35 1606 aa28.76■■■□□ 2.19
SMIM29-203ENST00000413013 DIP2CQ9Y2E4 1556 aa28.75■■■□□ 2.19
SMIM29-203ENST00000413013 CDC42BPBQ9Y5S2 1711 aa28.74■■■□□ 2.19
SMIM29-203ENST00000413013 REREQ9P2R6 1566 aa28.73■■■□□ 2.19
SMIM29-203ENST00000413013 CASKIN1Q8WXD9 1431 aa28.71■■■□□ 2.19
SMIM29-203ENST00000413013 ABCC1P33527 1531 aa28.71■■■□□ 2.19
SMIM29-203ENST00000413013 AFAP1Q8N556 730 aa28.71■■■□□ 2.19
SMIM29-203ENST00000413013 ABCA6Q8N139 1617 aa28.69■■■□□ 2.18
SMIM29-203ENST00000413013 ITSN2Q9NZM3 1697 aa28.68■■■□□ 2.18
SMIM29-203ENST00000413013 MLH3Q9UHC1 1453 aa28.68■■■□□ 2.18
SMIM29-203ENST00000413013 UHRF1BP1Q6BDS2 1440 aa28.66■■■□□ 2.18
SMIM29-203ENST00000413013 FYCO1Q9BQS8 1478 aa28.64■■■□□ 2.17
SMIM29-203ENST00000413013 CEBPAP49715 358 aaPredicted RBP28.62■■■□□ 2.17
SMIM29-203ENST00000413013 AGLP35573 1532 aa28.62■■■□□ 2.17
SMIM29-203ENST00000413013 CDC42BPAQ5VT25 1732 aa28.61■■■□□ 2.17
SMIM29-203ENST00000413013 CERKQ8TCT0 537 aa28.61■■■□□ 2.17
SMIM29-203ENST00000413013 TRAPPC8Q9Y2L5 1435 aa28.6■■■□□ 2.17
SMIM29-203ENST00000413013 ESF1Q9H501 851 aaKnown RBP28.6■■■□□ 2.17
SMIM29-203ENST00000413013 C3P01024 1663 aa28.58■■■□□ 2.17
SMIM29-203ENST00000413013 SETD1BQ9UPS6 1966 aaKnown RBP28.57■■■□□ 2.16
SMIM29-203ENST00000413013 DMRT2Q9Y5R5 561 aa28.56■■■□□ 2.16
SMIM29-203ENST00000413013 KIDINS220Q9ULH0 1771 aa28.55■■■□□ 2.16
SMIM29-203ENST00000413013 STRCQ7RTU9 1775 aa28.53■■■□□ 2.16
SMIM29-203ENST00000413013 CNTLNQ9NXG0 1405 aa28.52■■■□□ 2.16
SMIM29-203ENST00000413013 SAMD9LQ8IVG5 1584 aa28.5■■■□□ 2.15
SMIM29-203ENST00000413013 SYCP2Q9BX26 1530 aa28.49■■■□□ 2.15
SMIM29-203ENST00000413013 ZNF777Q9ULD5 760 aaPredicted RBP28.47■■■□□ 2.15
SMIM29-203ENST00000413013 MROH2AA6NES4 1674 aa28.45■■■□□ 2.14
SMIM29-203ENST00000413013 PLEKHH2Q8IVE3 1493 aa28.44■■■□□ 2.14
SMIM29-203ENST00000413013 GPATCH8Q9UKJ3 1502 aaKnown RBP28.43■■■□□ 2.14
SMIM29-203ENST00000413013 PTPRTO14522 1441 aa28.42■■■□□ 2.14
SMIM29-203ENST00000413013 SPAG9O60271 1321 aaKnown RBP28.42■■■□□ 2.14
SMIM29-203ENST00000413013 ATP7AQ04656 1500 aa28.41■■■□□ 2.14
SMIM29-203ENST00000413013 SUPT6HQ7KZ85 1726 aaKnown RBP28.39■■■□□ 2.14
SMIM29-203ENST00000413013 CCNB3Q8WWL7 1395 aa28.38■■■□□ 2.13
SMIM29-203ENST00000413013 INO80Q9ULG1 1556 aaPredicted RBP28.38■■■□□ 2.13
SMIM29-203ENST00000413013 NPATQ14207 1427 aa28.37■■■□□ 2.13
SMIM29-203ENST00000413013 KIAA1107Q9UPP5 1409 aa28.37■■■□□ 2.13
SMIM29-203ENST00000413013 CFDP1Q9UEE9 299 aaPredicted RBP28.36■■■□□ 2.13
SMIM29-203ENST00000413013 MTUS2Q5JR59 1369 aa28.36■■■□□ 2.13
SMIM29-203ENST00000413013 NCOA1Q15788 1441 aa28.35■■■□□ 2.13
SMIM29-203ENST00000413013 PLXNC1O60486 1568 aa28.34■■■□□ 2.13
SMIM29-203ENST00000413013 HNRNPMP52272 730 aaKnown RBP eCLIP28.34■■■□□ 2.13
SMIM29-203ENST00000413013 A2MP01023 1474 aa28.32■■■□□ 2.12
SMIM29-203ENST00000413013 CLTCQ00610 1675 aaKnown RBP28.31■■■□□ 2.12
SMIM29-203ENST00000413013 CAMSAP1Q5T5Y3 1602 aa28.29■■■□□ 2.12
SMIM29-203ENST00000413013 ZMYM3Q14202 1370 aa28.29■■■□□ 2.12
SMIM29-203ENST00000413013 ADGBQ8N7X0 1667 aa28.29■■■□□ 2.12
SMIM29-203ENST00000413013 EHBP1L1Q8N3D4 1523 aa28.28■■■□□ 2.12
SMIM29-203ENST00000413013 ZNF142P52746 1687 aaPredicted RBP28.26■■■□□ 2.12
SMIM29-203ENST00000413013 MYO3AQ8NEV4 1616 aa28.26■■■□□ 2.11
SMIM29-203ENST00000413013 TIAM1Q13009 1591 aa28.26■■■□□ 2.11
SMIM29-203ENST00000413013 IQSEC2Q5JU85 1478 aa28.25■■■□□ 2.11
SMIM29-203ENST00000413013 LTBP4Q8N2S1 1624 aa28.24■■■□□ 2.11
SMIM29-203ENST00000413013 CEP170BQ9Y4F5 1589 aaPredicted RBP28.2■■■□□ 2.1
SMIM29-203ENST00000413013 GGT6Q6P531 493 aa28.19■■■□□ 2.1
SMIM29-203ENST00000413013 PLA2R1Q13018 1463 aa28.18■■■□□ 2.1
SMIM29-203ENST00000413013 DISP3Q9P2K9 1392 aa28.17■■■□□ 2.1
SMIM29-203ENST00000413013 PTPRKQ15262 1439 aa28.17■■■□□ 2.1
SMIM29-203ENST00000413013 CEP162Q5TB80 1403 aa28.17■■■□□ 2.1
SMIM29-203ENST00000413013 PPP6R1Q9UPN7 881 aa28.16■■■□□ 2.1
SMIM29-203ENST00000413013 RTEL1-TNFRSF6BF6WH68 1400 aa28.14■■■□□ 2.1
SMIM29-203ENST00000413013 MBD5Q9P267 1494 aa28.13■■■□□ 2.09
SMIM29-203ENST00000413013 PKD2Q13563 968 aa28.12■■■□□ 2.09
SMIM29-203ENST00000413013 ZNF644Q9H582 1327 aaPredicted RBP28.12■■■□□ 2.09
SMIM29-203ENST00000413013 NCKAP5LQ9HCH0 1330 aa28.11■■■□□ 2.09
SMIM29-203ENST00000413013 SPATA31D1Q6ZQQ2 1576 aa28.11■■■□□ 2.09
SMIM29-203ENST00000413013 TCOF1Q13428 1488 aaKnown RBP28.09■■■□□ 2.09
SMIM29-203ENST00000413013 CCDC141Q6ZP82 1450 aa28.08■■■□□ 2.09
SMIM29-203ENST00000413013 FAM135AQ9P2D6 1515 aa28.08■■■□□ 2.08
SMIM29-203ENST00000413013 DHX29Q7Z478 1369 aaKnown RBP28.06■■■□□ 2.08
SMIM29-203ENST00000413013 A2ML1A8K2U0 1454 aa28.06■■■□□ 2.08
SMIM29-203ENST00000413013 CAMSAP2Q08AD1 1489 aa28.06■■■□□ 2.08
SMIM29-203ENST00000413013 KDM5DQ9BY66 1539 aa28.04■■■□□ 2.08
SMIM29-203ENST00000413013 NCOA2Q15596 1464 aa28.04■■■□□ 2.08
SMIM29-203ENST00000413013 ZNF335Q9H4Z2 1342 aaPredicted RBP28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms