RNA–Protein interactions for RNA: ENST00000412966.5

RAB5A-202, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5A, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-202ENST00000412966 MYO5CQ9NQX4 1742 aa22.84■■□□□ 1.25
RAB5A-202ENST00000412966 FMN1Q68DA7 1419 aa22.83■■□□□ 1.25
RAB5A-202ENST00000412966 FER1L4A9Z1Z3 1794 aa22.82■■□□□ 1.24
RAB5A-202ENST00000412966 KIF14Q15058 1648 aa22.82■■□□□ 1.24
RAB5A-202ENST00000412966 UBTFP17480 764 aaKnown RBP22.81■■□□□ 1.24
RAB5A-202ENST00000412966 HSPA2P54652 639 aa22.79■■□□□ 1.24
RAB5A-202ENST00000412966 ATP1B4Q9UN42 357 aaPredicted RBP22.79■■□□□ 1.24
RAB5A-202ENST00000412966 LRRIQ1Q96JM4 1722 aa22.79■■□□□ 1.24
RAB5A-202ENST00000412966 MLECQ14165 292 aa22.78■■□□□ 1.24
RAB5A-202ENST00000412966 PLPPR3Q6T4P5 718 aa22.78■■□□□ 1.24
RAB5A-202ENST00000412966 ARHGEF12Q9NZN5 1544 aa22.77■■□□□ 1.24
RAB5A-202ENST00000412966 ATP10AO60312 1499 aa22.76■■□□□ 1.23
RAB5A-202ENST00000412966 EFCAB2Q5VUJ9 269 aa22.75■■□□□ 1.23
RAB5A-202ENST00000412966 TROQ12816 1431 aaPredicted RBP22.74■■□□□ 1.23
RAB5A-202ENST00000412966 C9orf84Q5VXU9 1444 aa22.74■■□□□ 1.23
RAB5A-202ENST00000412966 CDK11AQ9UQ88 783 aaPredicted RBP22.72■■□□□ 1.23
RAB5A-202ENST00000412966 KDM5CP41229 1560 aa22.71■■□□□ 1.23
RAB5A-202ENST00000412966 CHIC1Q5VXU3 224 aa22.7■■□□□ 1.22
RAB5A-202ENST00000412966 ZNF518AQ6AHZ1 1483 aa22.7■■□□□ 1.22
RAB5A-202ENST00000412966 ARHGAP5Q13017 1502 aa22.7■■□□□ 1.22
RAB5A-202ENST00000412966 CDC42BPBQ9Y5S2 1711 aa22.69■■□□□ 1.22
RAB5A-202ENST00000412966 CLIP1P30622 1438 aa22.66■■□□□ 1.22
RAB5A-202ENST00000412966 PREX1Q8TCU6 1659 aa22.66■■□□□ 1.22
RAB5A-202ENST00000412966 AFAP1Q8N556 730 aa22.66■■□□□ 1.22
RAB5A-202ENST00000412966 DIP2CQ9Y2E4 1556 aa22.65■■□□□ 1.22
RAB5A-202ENST00000412966 PREX2Q70Z35 1606 aa22.62■■□□□ 1.21
RAB5A-202ENST00000412966 ABCA6Q8N139 1617 aa22.62■■□□□ 1.21
RAB5A-202ENST00000412966 CEBPAP49715 358 aaPredicted RBP22.62■■□□□ 1.21
RAB5A-202ENST00000412966 REREQ9P2R6 1566 aa22.62■■□□□ 1.21
RAB5A-202ENST00000412966 CASKIN1Q8WXD9 1431 aa22.59■■□□□ 1.21
RAB5A-202ENST00000412966 ABCC1P33527 1531 aa22.59■■□□□ 1.21
RAB5A-202ENST00000412966 MLH3Q9UHC1 1453 aa22.59■■□□□ 1.21
RAB5A-202ENST00000412966 ITSN2Q9NZM3 1697 aa22.58■■□□□ 1.21
RAB5A-202ENST00000412966 SETD1BQ9UPS6 1966 aaKnown RBP22.58■■□□□ 1.21
RAB5A-202ENST00000412966 TRAPPC8Q9Y2L5 1435 aa22.57■■□□□ 1.2
RAB5A-202ENST00000412966 CCDC18Q5T9S5 1454 aa22.57■■□□□ 1.2
RAB5A-202ENST00000412966 STRCQ7RTU9 1775 aa22.57■■□□□ 1.2
RAB5A-202ENST00000412966 CDC42BPAQ5VT25 1732 aa22.57■■□□□ 1.2
RAB5A-202ENST00000412966 CERKQ8TCT0 537 aa22.56■■□□□ 1.2
RAB5A-202ENST00000412966 MYT1LQ9UL68 1186 aa22.55■■□□□ 1.2
RAB5A-202ENST00000412966 C3P01024 1663 aa22.55■■□□□ 1.2
RAB5A-202ENST00000412966 KIDINS220Q9ULH0 1771 aa22.53■■□□□ 1.2
RAB5A-202ENST00000412966 AGLP35573 1532 aa22.53■■□□□ 1.2
RAB5A-202ENST00000412966 UHRF1BP1Q6BDS2 1440 aa22.52■■□□□ 1.2
RAB5A-202ENST00000412966 FYCO1Q9BQS8 1478 aa22.48■■□□□ 1.19
RAB5A-202ENST00000412966 SAMD9LQ8IVG5 1584 aa22.46■■□□□ 1.19
RAB5A-202ENST00000412966 SYCP2Q9BX26 1530 aa22.42■■□□□ 1.18
RAB5A-202ENST00000412966 DMRT2Q9Y5R5 561 aa22.42■■□□□ 1.18
RAB5A-202ENST00000412966 GPATCH8Q9UKJ3 1502 aaKnown RBP22.41■■□□□ 1.18
RAB5A-202ENST00000412966 ESF1Q9H501 851 aaKnown RBP22.39■■□□□ 1.17
RAB5A-202ENST00000412966 ZNF777Q9ULD5 760 aaPredicted RBP22.39■■□□□ 1.17
RAB5A-202ENST00000412966 PTPRTO14522 1441 aa22.39■■□□□ 1.17
RAB5A-202ENST00000412966 CNTLNQ9NXG0 1405 aa22.39■■□□□ 1.17
RAB5A-202ENST00000412966 MROH2AA6NES4 1674 aa22.38■■□□□ 1.17
RAB5A-202ENST00000412966 SUPT6HQ7KZ85 1726 aaKnown RBP22.37■■□□□ 1.17
RAB5A-202ENST00000412966 HNRNPMP52272 730 aaKnown RBP eCLIP22.35■■□□□ 1.17
RAB5A-202ENST00000412966 SPAG9O60271 1321 aaKnown RBP22.34■■□□□ 1.17
RAB5A-202ENST00000412966 INO80Q9ULG1 1556 aaPredicted RBP22.34■■□□□ 1.17
RAB5A-202ENST00000412966 ATP7AQ04656 1500 aa22.34■■□□□ 1.17
RAB5A-202ENST00000412966 PLXNC1O60486 1568 aa22.33■■□□□ 1.17
RAB5A-202ENST00000412966 NCOA1Q15788 1441 aa22.33■■□□□ 1.17
RAB5A-202ENST00000412966 KIAA1107Q9UPP5 1409 aa22.32■■□□□ 1.16
RAB5A-202ENST00000412966 NPATQ14207 1427 aa22.31■■□□□ 1.16
RAB5A-202ENST00000412966 LTBP4Q8N2S1 1624 aa22.31■■□□□ 1.16
RAB5A-202ENST00000412966 CLTCQ00610 1675 aaKnown RBP22.3■■□□□ 1.16
RAB5A-202ENST00000412966 PLEKHH2Q8IVE3 1493 aa22.3■■□□□ 1.16
RAB5A-202ENST00000412966 ZMYM3Q14202 1370 aa22.3■■□□□ 1.16
RAB5A-202ENST00000412966 CFDP1Q9UEE9 299 aaPredicted RBP22.29■■□□□ 1.16
RAB5A-202ENST00000412966 CAMSAP1Q5T5Y3 1602 aa22.28■■□□□ 1.16
RAB5A-202ENST00000412966 CCNB3Q8WWL7 1395 aa22.28■■□□□ 1.16
RAB5A-202ENST00000412966 A2MP01023 1474 aa22.28■■□□□ 1.16
RAB5A-202ENST00000412966 MTUS2Q5JR59 1369 aa22.25■■□□□ 1.15
RAB5A-202ENST00000412966 TIAM1Q13009 1591 aa22.25■■□□□ 1.15
RAB5A-202ENST00000412966 ZNF142P52746 1687 aaPredicted RBP22.24■■□□□ 1.15
RAB5A-202ENST00000412966 MYO3AQ8NEV4 1616 aa22.24■■□□□ 1.15
RAB5A-202ENST00000412966 ADGBQ8N7X0 1667 aa22.23■■□□□ 1.15
RAB5A-202ENST00000412966 PTPRKQ15262 1439 aa22.22■■□□□ 1.15
RAB5A-202ENST00000412966 ZNF644Q9H582 1327 aaPredicted RBP22.21■■□□□ 1.15
RAB5A-202ENST00000412966 IQSEC2Q5JU85 1478 aa22.21■■□□□ 1.15
RAB5A-202ENST00000412966 MBD5Q9P267 1494 aa22.21■■□□□ 1.15
RAB5A-202ENST00000412966 EHBP1L1Q8N3D4 1523 aa22.2■■□□□ 1.14
RAB5A-202ENST00000412966 GGT6Q6P531 493 aa22.19■■□□□ 1.14
RAB5A-202ENST00000412966 NCKAP5LQ9HCH0 1330 aa22.19■■□□□ 1.14
RAB5A-202ENST00000412966 CEP170BQ9Y4F5 1589 aaPredicted RBP22.19■■□□□ 1.14
RAB5A-202ENST00000412966 DISP3Q9P2K9 1392 aa22.18■■□□□ 1.14
RAB5A-202ENST00000412966 PLA2R1Q13018 1463 aa22.17■■□□□ 1.14
RAB5A-202ENST00000412966 CEP162Q5TB80 1403 aa22.15■■□□□ 1.14
RAB5A-202ENST00000412966 ILDR2Q71H61 639 aa22.15■■□□□ 1.14
RAB5A-202ENST00000412966 TCOF1Q13428 1488 aaKnown RBP22.15■■□□□ 1.14
RAB5A-202ENST00000412966 RTEL1-TNFRSF6BF6WH68 1400 aa22.14■■□□□ 1.13
RAB5A-202ENST00000412966 ZNF335Q9H4Z2 1342 aaPredicted RBP22.13■■□□□ 1.13
RAB5A-202ENST00000412966 PPP6R1Q9UPN7 881 aa22.13■■□□□ 1.13
RAB5A-202ENST00000412966 PKD2Q13563 968 aa22.11■■□□□ 1.13
RAB5A-202ENST00000412966 SPATA31D1Q6ZQQ2 1576 aa22.11■■□□□ 1.13
RAB5A-202ENST00000412966 DHX29Q7Z478 1369 aaKnown RBP22.11■■□□□ 1.13
RAB5A-202ENST00000412966 DNMT1P26358 1616 aaKnown RBP22.09■■□□□ 1.13
RAB5A-202ENST00000412966 A2ML1A8K2U0 1454 aa22.09■■□□□ 1.13
RAB5A-202ENST00000412966 CCDC141Q6ZP82 1450 aa22.07■■□□□ 1.12
RAB5A-202ENST00000412966 CAMSAP2Q08AD1 1489 aa22.06■■□□□ 1.12
RAB5A-202ENST00000412966 NCOA2Q15596 1464 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms