RNA–Protein interactions for RNA: ENST00000412962.4

CROCCP2-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

BASIC

Gene CROCCP2, Length 2,773 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-202ENST00000412962 ABCC5O15440 1437 aa25.37■■□□□ 1.65
CROCCP2-202ENST00000412962 CAMSAP2Q08AD1 1489 aa25.35■■□□□ 1.65
CROCCP2-202ENST00000412962 CFDP1Q9UEE9 299 aaPredicted RBP25.35■■□□□ 1.65
CROCCP2-202ENST00000412962 TIMELESSQ9UNS1 1208 aa25.35■■□□□ 1.65
CROCCP2-202ENST00000412962 PLEKHD1A6NEE1 506 aa25.34■■□□□ 1.65
CROCCP2-202ENST00000412962 ROCK1Q13464 1354 aa25.32■■□□□ 1.64
CROCCP2-202ENST00000412962 YTHDC1Q96MU7 727 aaKnown RBP25.31■■□□□ 1.64
CROCCP2-202ENST00000412962 MIER1Q8N108 512 aa25.29■■□□□ 1.64
CROCCP2-202ENST00000412962 CDC42BPAQ5VT25 1732 aa25.28■■□□□ 1.64
CROCCP2-202ENST00000412962 TRIM52Q96A61 297 aa25.28■■□□□ 1.64
CROCCP2-202ENST00000412962 ABCC10Q5T3U5 1492 aa25.28■■□□□ 1.64
CROCCP2-202ENST00000412962 ERCC6L2Q5T890 1561 aa25.27■■□□□ 1.64
CROCCP2-202ENST00000412962 ZNF777Q9ULD5 760 aaPredicted RBP25.27■■□□□ 1.64
CROCCP2-202ENST00000412962 TONSLQ96HA7 1378 aa25.25■■□□□ 1.63
CROCCP2-202ENST00000412962 DENND4BO75064 1496 aaPredicted RBP25.24■■□□□ 1.63
CROCCP2-202ENST00000412962 PPP1R15AO75807 674 aaPredicted RBP25.22■■□□□ 1.63
CROCCP2-202ENST00000412962 CROCC2H7BZ55 1655 aa25.22■■□□□ 1.63
CROCCP2-202ENST00000412962 ADGBQ8N7X0 1667 aa25.22■■□□□ 1.63
CROCCP2-202ENST00000412962 CLASP1Q7Z460 1538 aa25.21■■□□□ 1.63
CROCCP2-202ENST00000412962 ACIN1Q9UKV3 1341 aaKnown RBP25.21■■□□□ 1.63
CROCCP2-202ENST00000412962 MPHOSPH9Q99550 1183 aa25.17■■□□□ 1.62
CROCCP2-202ENST00000412962 NCOA1Q15788 1441 aa25.15■■□□□ 1.62
CROCCP2-202ENST00000412962 ABCC2Q92887 1545 aa25.15■■□□□ 1.62
CROCCP2-202ENST00000412962 GTF3C3Q9Y5Q9 886 aa25.15■■□□□ 1.62
CROCCP2-202ENST00000412962 ADGRL2O95490 1459 aa25.15■■□□□ 1.62
CROCCP2-202ENST00000412962 CENPBP07199 599 aaPredicted RBP25.15■■□□□ 1.62
CROCCP2-202ENST00000412962 PREX2Q70Z35 1606 aa25.09■■□□□ 1.61
CROCCP2-202ENST00000412962 ANKRD30AQ9BXX3 1397 aa25.09■■□□□ 1.61
CROCCP2-202ENST00000412962 KDM5BQ9UGL1 1544 aa25.09■■□□□ 1.61
CROCCP2-202ENST00000412962 SHANK2Q9UPX8 1470 aa25.08■■□□□ 1.6
CROCCP2-202ENST00000412962 CDC42BPBQ9Y5S2 1711 aa25.08■■□□□ 1.6
CROCCP2-202ENST00000412962 FOXD1Q16676 465 aa25.07■■□□□ 1.6
CROCCP2-202ENST00000412962 C9orf84Q5VXU9 1444 aa25.05■■□□□ 1.6
CROCCP2-202ENST00000412962 TTC37Q6PGP7 1564 aa25.05■■□□□ 1.6
CROCCP2-202ENST00000412962 SAMD9LQ8IVG5 1584 aa25.04■■□□□ 1.6
CROCCP2-202ENST00000412962 ARHGEF5Q12774 1597 aa25.03■■□□□ 1.6
CROCCP2-202ENST00000412962 SLC4A1APQ9BWU0 796 aaKnown RBP25.03■■□□□ 1.6
CROCCP2-202ENST00000412962 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.02■■□□□ 1.61e-9■■□□□ 11.8
CROCCP2-202ENST00000412962 PZPP20742 1482 aa25.01■■□□□ 1.59
CROCCP2-202ENST00000412962 ANKRD30BQ9BXX2 1392 aa25.01■■□□□ 1.59
CROCCP2-202ENST00000412962 HNRNPMP52272 730 aaKnown RBP eCLIP25.01■■□□□ 1.59
CROCCP2-202ENST00000412962 ZCCHC11Q5TAX3 1644 aaKnown RBP25■■□□□ 1.59
CROCCP2-202ENST00000412962 ANKRD50Q9ULJ7 1429 aa25■■□□□ 1.59
CROCCP2-202ENST00000412962 MBD5Q9P267 1494 aa25■■□□□ 1.59
CROCCP2-202ENST00000412962 UHRF1BP1LA0JNW5 1464 aa24.99■■□□□ 1.59
CROCCP2-202ENST00000412962 TSPY4P0CV99 314 aa24.99■■□□□ 1.59
CROCCP2-202ENST00000412962 TSPY10P0CW01 314 aa24.99■■□□□ 1.59
CROCCP2-202ENST00000412962 HIRIP3Q9BW71 556 aaPredicted RBP24.98■■□□□ 1.59
CROCCP2-202ENST00000412962 ARHGAP5Q13017 1502 aa24.97■■□□□ 1.59
CROCCP2-202ENST00000412962 CCDC141Q6ZP82 1450 aa24.96■■□□□ 1.59
CROCCP2-202ENST00000412962 MYO5CQ9NQX4 1742 aa24.96■■□□□ 1.59
CROCCP2-202ENST00000412962 RPRD2Q5VT52 1461 aaKnown RBP24.95■■□□□ 1.58
CROCCP2-202ENST00000412962 SYCP2Q9BX26 1530 aa24.93■■□□□ 1.58
CROCCP2-202ENST00000412962 KCNH8Q96L42 1107 aa24.93■■□□□ 1.58
CROCCP2-202ENST00000412962 KIF15Q9NS87 1388 aa24.92■■□□□ 1.58
CROCCP2-202ENST00000412962 L3MBTL2Q969R5 705 aa24.91■■□□□ 1.58
CROCCP2-202ENST00000412962 DDX10Q13206 875 aaKnown RBP24.9■■□□□ 1.58
CROCCP2-202ENST00000412962 RSPH4AQ5TD94 716 aa24.88■■□□□ 1.57
CROCCP2-202ENST00000412962 KIAA1107Q9UPP5 1409 aa24.88■■□□□ 1.57
CROCCP2-202ENST00000412962 TEX14Q8IWB6 1497 aa24.87■■□□□ 1.57
CROCCP2-202ENST00000412962 PKD2Q13563 968 aa24.85■■□□□ 1.57
CROCCP2-202ENST00000412962 NUP155O75694 1391 aa24.85■■□□□ 1.57
CROCCP2-202ENST00000412962 KDM5DQ9BY66 1539 aa24.83■■□□□ 1.57
CROCCP2-202ENST00000412962 PLEKHH2Q8IVE3 1493 aa24.83■■□□□ 1.57
CROCCP2-202ENST00000412962 MAST1Q9Y2H9 1570 aa24.83■■□□□ 1.57
CROCCP2-202ENST00000412962 PLCH2O75038 1416 aa24.82■■□□□ 1.56
CROCCP2-202ENST00000412962 ARHGEF12Q9NZN5 1544 aa24.77■■□□□ 1.56
CROCCP2-202ENST00000412962 HSPA5P11021 654 aaKnown RBP24.75■■□□□ 1.55
CROCCP2-202ENST00000412962 PLXNC1O60486 1568 aa24.75■■□□□ 1.55
CROCCP2-202ENST00000412962 EFCAB2Q5VUJ9 269 aa24.75■■□□□ 1.55
CROCCP2-202ENST00000412962 NBPF8Q3BBV2 869 aa24.74■■□□□ 1.55
CROCCP2-202ENST00000412962 WDR7Q9Y4E6 1490 aa24.73■■□□□ 1.55
CROCCP2-202ENST00000412962 ABCC1P33527 1531 aa24.73■■□□□ 1.55
CROCCP2-202ENST00000412962 EIF4G2P78344 907 aaKnown RBP eCLIP24.72■■□□□ 1.55
CROCCP2-202ENST00000412962 FAM135AQ9P2D6 1515 aa24.7■■□□□ 1.55
CROCCP2-202ENST00000412962 OSCARQ8IYS5 282 aa24.7■■□□□ 1.54
CROCCP2-202ENST00000412962 UNC13BO14795 1591 aa24.69■■□□□ 1.54
CROCCP2-202ENST00000412962 ARAP3Q8WWN8 1544 aa24.68■■□□□ 1.54
CROCCP2-202ENST00000412962 TRAPPC8Q9Y2L5 1435 aa24.66■■□□□ 1.54
CROCCP2-202ENST00000412962 DUOX2Q9NRD8 1548 aa24.65■■□□□ 1.54
CROCCP2-202ENST00000412962 WASHC2AQ641Q2 1341 aa24.63■■□□□ 1.53
CROCCP2-202ENST00000412962 ANP32CO43423 234 aa24.62■■□□□ 1.53
CROCCP2-202ENST00000412962 ABCA9Q8IUA7 1624 aa24.62■■□□□ 1.53
CROCCP2-202ENST00000412962 ASXL2Q76L83 1435 aa24.6■■□□□ 1.53
CROCCP2-202ENST00000412962 ERBINQ96RT1 1412 aa24.6■■□□□ 1.53
CROCCP2-202ENST00000412962 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.59■■□□□ 1.532e-7■■□□□ 11.9
CROCCP2-202ENST00000412962 IQGAP3Q86VI3 1631 aa24.59■■□□□ 1.53
CROCCP2-202ENST00000412962 ZNF326Q5BKZ1 582 aaKnown RBP24.58■■□□□ 1.53
CROCCP2-202ENST00000412962 FANCAO15360 1455 aa24.57■■□□□ 1.52
CROCCP2-202ENST00000412962 SPATA31E1Q6ZUB1 1445 aa24.57■■□□□ 1.52
CROCCP2-202ENST00000412962 MAGI2Q86UL8 1455 aa24.55■■□□□ 1.52
CROCCP2-202ENST00000412962 SPAG9O60271 1321 aaKnown RBP24.55■■□□□ 1.52
CROCCP2-202ENST00000412962 ZFYVE16Q7Z3T8 1539 aa24.55■■□□□ 1.52
CROCCP2-202ENST00000412962 AFAP1Q8N556 730 aa24.54■■□□□ 1.52
CROCCP2-202ENST00000412962 UHRF1BP1Q6BDS2 1440 aa24.53■■□□□ 1.52
CROCCP2-202ENST00000412962 RTEL1-TNFRSF6BF6WH68 1400 aa24.53■■□□□ 1.52
CROCCP2-202ENST00000412962 CCER2I3L3R5 266 aa24.53■■□□□ 1.52
CROCCP2-202ENST00000412962 C11orf95C9JLR9 678 aaPredicted RBP24.52■■□□□ 1.52
CROCCP2-202ENST00000412962 CCDC7Q96M83 1385 aa24.51■■□□□ 1.51
CROCCP2-202ENST00000412962 CCDC144AA2RUR9 1427 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms