RNA–Protein interactions for RNA: ENST00000412916.6

CBFB-202, Transcript of core-binding factor subunit beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CBFB, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFB-202ENST00000412916 ARHGEF11O15085 1522 aa24.57■■□□□ 1.52
CBFB-202ENST00000412916 CHMP7Q8WUX9 453 aaPredicted RBP24.56■■□□□ 1.52
CBFB-202ENST00000412916 HECW1Q76N89 1606 aa24.55■■□□□ 1.52
CBFB-202ENST00000412916 CFDP1Q9UEE9 299 aaPredicted RBP24.55■■□□□ 1.52
CBFB-202ENST00000412916 MRS2Q9HD23 443 aa24.54■■□□□ 1.52
CBFB-202ENST00000412916 ADAMTS12P58397 1594 aa24.54■■□□□ 1.52
CBFB-202ENST00000412916 WDR62O43379 1518 aa24.53■■□□□ 1.52
CBFB-202ENST00000412916 ABCC5O15440 1437 aa24.52■■□□□ 1.52
CBFB-202ENST00000412916 PLB1Q6P1J6 1458 aa24.51■■□□□ 1.51
CBFB-202ENST00000412916 DAPK1P53355 1430 aa24.51■■□□□ 1.51
CBFB-202ENST00000412916 RBM19Q9Y4C8 960 aaKnown RBP24.51■■□□□ 1.51
CBFB-202ENST00000412916 NUP153P49790 1475 aaKnown RBP24.5■■□□□ 1.51
CBFB-202ENST00000412916 KDM2AQ9Y2K7 1162 aa24.49■■□□□ 1.51
CBFB-202ENST00000412916 MRC2Q9UBG0 1479 aa24.49■■□□□ 1.51
CBFB-202ENST00000412916 TCOF1Q13428 1488 aaKnown RBP24.49■■□□□ 1.51
CBFB-202ENST00000412916 DISP1Q96F81 1524 aa24.48■■□□□ 1.51
CBFB-202ENST00000412916 PRKRIP1Q9H875 184 aaPredicted RBP24.47■■□□□ 1.51
CBFB-202ENST00000412916 ANKRD30BQ9BXX2 1392 aa24.46■■□□□ 1.51
CBFB-202ENST00000412916 KIF7Q2M1P5 1343 aa24.46■■□□□ 1.51
CBFB-202ENST00000412916 PKD2Q13563 968 aa24.45■■□□□ 1.5
CBFB-202ENST00000412916 CCDC7Q96M83 1385 aa24.44■■□□□ 1.5
CBFB-202ENST00000412916 GCC2Q8IWJ2 1684 aa24.41■■□□□ 1.5
CBFB-202ENST00000412916 MIA2Q96PC5 1412 aa24.4■■□□□ 1.5
CBFB-202ENST00000412916 CDK11AQ9UQ88 783 aaPredicted RBP24.39■■□□□ 1.49
CBFB-202ENST00000412916 B4GALNT3Q6L9W6 998 aa24.39■■□□□ 1.49
CBFB-202ENST00000412916 CNTLNQ9NXG0 1405 aa24.38■■□□□ 1.49
CBFB-202ENST00000412916 KIAA0556O60303 1618 aa24.37■■□□□ 1.49
CBFB-202ENST00000412916 HNRNPMP52272 730 aaKnown RBP eCLIP24.36■■□□□ 1.494e-8■■■■■ 27.4
CBFB-202ENST00000412916 JPH4Q96JJ6 628 aa24.36■■□□□ 1.49
CBFB-202ENST00000412916 ERCC6Q03468 1493 aa24.36■■□□□ 1.49
CBFB-202ENST00000412916 GRIN2AQ12879 1464 aa24.35■■□□□ 1.49
CBFB-202ENST00000412916 KIAA0586Q9BVV6 1533 aa24.34■■□□□ 1.49
CBFB-202ENST00000412916 KIF14Q15058 1648 aa24.34■■□□□ 1.49
CBFB-202ENST00000412916 SALL2Q9Y467 1007 aaPredicted RBP24.33■■□□□ 1.49
CBFB-202ENST00000412916 RPRD2Q5VT52 1461 aaKnown RBP24.33■■□□□ 1.49
CBFB-202ENST00000412916 NCOA1Q15788 1441 aa24.32■■□□□ 1.48
CBFB-202ENST00000412916 TEX14Q8IWB6 1497 aa24.32■■□□□ 1.48
CBFB-202ENST00000412916 CAMSAP2Q08AD1 1489 aa24.31■■□□□ 1.48
CBFB-202ENST00000412916 ANP32EQ9BTT0 268 aa24.3■■□□□ 1.48
CBFB-202ENST00000412916 EIF4G3O43432 1585 aaKnown RBP24.3■■□□□ 1.48
CBFB-202ENST00000412916 IFT140Q96RY7 1462 aa24.29■■□□□ 1.48
CBFB-202ENST00000412916 RAPGEF6Q8TEU7 1601 aa24.29■■□□□ 1.48
CBFB-202ENST00000412916 PZPP20742 1482 aa24.28■■□□□ 1.48
CBFB-202ENST00000412916 RGL3Q3MIN7 710 aa24.28■■□□□ 1.48
CBFB-202ENST00000412916 MSH5O43196 834 aa24.27■■□□□ 1.48
CBFB-202ENST00000412916 AKNAQ7Z591 1439 aa24.27■■□□□ 1.48
CBFB-202ENST00000412916 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.27■■□□□ 1.484e-6■■■□□ 17.8
CBFB-202ENST00000412916 DNMT1P26358 1616 aaKnown RBP24.26■■□□□ 1.47
CBFB-202ENST00000412916 GPATCH8Q9UKJ3 1502 aaKnown RBP24.26■■□□□ 1.47
CBFB-202ENST00000412916 NUP155O75694 1391 aa24.26■■□□□ 1.47
CBFB-202ENST00000412916 TROQ12816 1431 aaPredicted RBP24.24■■□□□ 1.47
CBFB-202ENST00000412916 PLEKHD1A6NEE1 506 aa24.24■■□□□ 1.47
CBFB-202ENST00000412916 DCAF11Q8TEB1 546 aa24.24■■□□□ 1.47
CBFB-202ENST00000412916 CEP170Q5SW79 1584 aa24.23■■□□□ 1.47
CBFB-202ENST00000412916 USP47Q96K76 1375 aa24.23■■□□□ 1.47
CBFB-202ENST00000412916 ROCK1Q13464 1354 aa24.22■■□□□ 1.47
CBFB-202ENST00000412916 CARD11Q9BXL7 1154 aa24.21■■□□□ 1.47
CBFB-202ENST00000412916 SPATA31E1Q6ZUB1 1445 aa24.2■■□□□ 1.47
CBFB-202ENST00000412916 ST20-MTHFSA0A0A6YYL1 179 aa24.2■■□□□ 1.46
CBFB-202ENST00000412916 ANKRD50Q9ULJ7 1429 aa24.17■■□□□ 1.46
CBFB-202ENST00000412916 TSPY4P0CV99 314 aa24.14■■□□□ 1.46
CBFB-202ENST00000412916 TSPY10P0CW01 314 aa24.14■■□□□ 1.46
CBFB-202ENST00000412916 BCORL1Q5H9F3 1711 aa24.14■■□□□ 1.46
CBFB-202ENST00000412916 KIAA1107Q9UPP5 1409 aa24.13■■□□□ 1.45
CBFB-202ENST00000412916 ANKRD30AQ9BXX3 1397 aa24.13■■□□□ 1.45
CBFB-202ENST00000412916 DHX29Q7Z478 1369 aaKnown RBP24.11■■□□□ 1.45
CBFB-202ENST00000412916 NBPF1Q3BBV0 1214 aa24.1■■□□□ 1.45
CBFB-202ENST00000412916 ZBED9Q6R2W3 1325 aa24.09■■□□□ 1.45
CBFB-202ENST00000412916 TMC1Q8TDI8 760 aa24.08■■□□□ 1.44
CBFB-202ENST00000412916 ATP10BO94823 1461 aa24.07■■□□□ 1.44
CBFB-202ENST00000412916 SYNJ2O15056 1496 aa24.07■■□□□ 1.44
CBFB-202ENST00000412916 BCL11AQ9H165 835 aa24.07■■□□□ 1.44
CBFB-202ENST00000412916 PPP4R2Q9NY27 417 aa24.07■■□□□ 1.44
CBFB-202ENST00000412916 C9orf84Q5VXU9 1444 aa24.07■■□□□ 1.44
CBFB-202ENST00000412916 CARMIL2Q6F5E8 1435 aa24.05■■□□□ 1.44
CBFB-202ENST00000412916 KIF15Q9NS87 1388 aa24.04■■□□□ 1.44
CBFB-202ENST00000412916 CC2D1BQ5T0F9 858 aaKnown RBP24■■□□□ 1.43
CBFB-202ENST00000412916 MAGI1Q96QZ7 1491 aaPredicted RBP23.99■■□□□ 1.43
CBFB-202ENST00000412916 MBD5Q9P267 1494 aa23.97■■□□□ 1.43
CBFB-202ENST00000412916 PNISRQ8TF01 805 aaKnown RBP23.97■■□□□ 1.43
CBFB-202ENST00000412916 ROCK2O75116 1388 aaKnown RBP23.96■■□□□ 1.43
CBFB-202ENST00000412916 CDC42BPAQ5VT25 1732 aa23.96■■□□□ 1.43
CBFB-202ENST00000412916 PTPRGP23470 1445 aa23.94■■□□□ 1.42
CBFB-202ENST00000412916 ITSN2Q9NZM3 1697 aa23.92■■□□□ 1.42
CBFB-202ENST00000412916 ABCC10Q5T3U5 1492 aa23.92■■□□□ 1.42
CBFB-202ENST00000412916 NUP160Q12769 1436 aa23.91■■□□□ 1.42
CBFB-202ENST00000412916 SKAP1Q86WV1 359 aa23.91■■□□□ 1.42
CBFB-202ENST00000412916 NUDCQ9Y266 331 aa23.91■■□□□ 1.42
CBFB-202ENST00000412916 KDM5CP41229 1560 aa23.9■■□□□ 1.42
CBFB-202ENST00000412916 ADGBQ8N7X0 1667 aa23.9■■□□□ 1.42
CBFB-202ENST00000412916 CCDC136Q96JN2 1154 aa23.9■■□□□ 1.42
CBFB-202ENST00000412916 ADGRL2O95490 1459 aa23.89■■□□□ 1.42
CBFB-202ENST00000412916 CDCA7LQ96GN5 454 aa23.89■■□□□ 1.41
CBFB-202ENST00000412916 ERICH6Q7L0X2 663 aa23.88■■□□□ 1.41
CBFB-202ENST00000412916 CROCC2H7BZ55 1655 aa23.87■■□□□ 1.41
CBFB-202ENST00000412916 PLIN1O60240 522 aa23.85■■□□□ 1.41
CBFB-202ENST00000412916 ABCA8O94911 1581 aa23.85■■□□□ 1.41
CBFB-202ENST00000412916 ERCC6L2Q5T890 1561 aa23.81■■□□□ 1.4
CBFB-202ENST00000412916 EXOC6Q8TAG9 804 aa23.8■■□□□ 1.4
CBFB-202ENST00000412916 SENP3Q9H4L4 574 aaPredicted RBP23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms