RNA–Protein interactions for RNA: ENST00000412670.1

PHTF1-206, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best)

Gene PHTF1, Length 1,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-206ENST00000412670 EFCAB2Q5VUJ9 269 aa16.48■□□□□ 0.23
PHTF1-206ENST00000412670 COL17A1Q9UMD9 1497 aaPredicted RBP16.47■□□□□ 0.23
PHTF1-206ENST00000412670 AKNAQ7Z591 1439 aa16.46■□□□□ 0.23
PHTF1-206ENST00000412670 EHBP1L1Q8N3D4 1523 aa16.46■□□□□ 0.23
PHTF1-206ENST00000412670 APLP2Q06481 763 aa16.45■□□□□ 0.22
PHTF1-206ENST00000412670 TIAM1Q13009 1591 aa16.45■□□□□ 0.22
PHTF1-206ENST00000412670 MYO5CQ9NQX4 1742 aa16.45■□□□□ 0.22
PHTF1-206ENST00000412670 DENND4BO75064 1496 aaPredicted RBP16.42■□□□□ 0.22
PHTF1-206ENST00000412670 CCNB3Q8WWL7 1395 aa16.41■□□□□ 0.22
PHTF1-206ENST00000412670 ARHGAP5Q13017 1502 aa16.41■□□□□ 0.22
PHTF1-206ENST00000412670 LRRC9Q6ZRR7 1453 aa16.4■□□□□ 0.22
PHTF1-206ENST00000412670 PREX2Q70Z35 1606 aa16.39■□□□□ 0.21
PHTF1-206ENST00000412670 ADGRL1O94910 1474 aa16.39■□□□□ 0.21
PHTF1-206ENST00000412670 GPATCH8Q9UKJ3 1502 aaKnown RBP16.39■□□□□ 0.21
PHTF1-206ENST00000412670 SCAPERQ9BY12 1400 aa16.37■□□□□ 0.21
PHTF1-206ENST00000412670 SUPT6HQ7KZ85 1726 aaKnown RBP16.36■□□□□ 0.21
PHTF1-206ENST00000412670 RAPGEF3O95398 923 aa16.36■□□□□ 0.21
PHTF1-206ENST00000412670 CFDP1Q9UEE9 299 aaPredicted RBP16.36■□□□□ 0.21
PHTF1-206ENST00000412670 CDC42BPBQ9Y5S2 1711 aa16.36■□□□□ 0.21
PHTF1-206ENST00000412670 CDC42BPAQ5VT25 1732 aa16.35■□□□□ 0.21
PHTF1-206ENST00000412670 POGZQ7Z3K3 1410 aa16.35■□□□□ 0.21
PHTF1-206ENST00000412670 NCOA2Q15596 1464 aa16.35■□□□□ 0.21
PHTF1-206ENST00000412670 MAGI2Q86UL8 1455 aa16.35■□□□□ 0.21
PHTF1-206ENST00000412670 PLEKHH2Q8IVE3 1493 aa16.35■□□□□ 0.21
PHTF1-206ENST00000412670 KIAA1107Q9UPP5 1409 aa16.33■□□□□ 0.2
PHTF1-206ENST00000412670 ZNF518AQ6AHZ1 1483 aa16.33■□□□□ 0.2
PHTF1-206ENST00000412670 ITSN2Q9NZM3 1697 aa16.33■□□□□ 0.2
PHTF1-206ENST00000412670 ZMYM4Q5VZL5 1548 aa16.32■□□□□ 0.2
PHTF1-206ENST00000412670 RICTORQ6R327 1708 aa16.31■□□□□ 0.2
PHTF1-206ENST00000412670 FRMPD1Q5SYB0 1578 aa16.31■□□□□ 0.2
PHTF1-206ENST00000412670 KANK4Q5T7N3 995 aaPredicted RBP16.31■□□□□ 0.2
PHTF1-206ENST00000412670 ABCC1P33527 1531 aa16.3■□□□□ 0.2
PHTF1-206ENST00000412670 ZNF777Q9ULD5 760 aaPredicted RBP16.28■□□□□ 0.2
PHTF1-206ENST00000412670 KDM5CP41229 1560 aa16.27■□□□□ 0.2
PHTF1-206ENST00000412670 RSPH4AQ5TD94 716 aa16.27■□□□□ 0.2
PHTF1-206ENST00000412670 MIA2Q96PC5 1412 aa16.27■□□□□ 0.19
PHTF1-206ENST00000412670 SAMD9LQ8IVG5 1584 aa16.26■□□□□ 0.19
PHTF1-206ENST00000412670 ZFYVE16Q7Z3T8 1539 aa16.25■□□□□ 0.19
PHTF1-206ENST00000412670 MLH3Q9UHC1 1453 aa16.25■□□□□ 0.19
PHTF1-206ENST00000412670 AFAP1Q8N556 730 aa16.25■□□□□ 0.19
PHTF1-206ENST00000412670 MYOM3Q5VTT5 1437 aa16.25■□□□□ 0.19
PHTF1-206ENST00000412670 ARHGEF40Q8TER5 1519 aa16.24■□□□□ 0.19
PHTF1-206ENST00000412670 ARHGEF12Q9NZN5 1544 aa16.24■□□□□ 0.19
PHTF1-206ENST00000412670 TRAPPC8Q9Y2L5 1435 aa16.23■□□□□ 0.19
PHTF1-206ENST00000412670 SYCP2Q9BX26 1530 aa16.22■□□□□ 0.19
PHTF1-206ENST00000412670 HNRNPMP52272 730 aaKnown RBP eCLIP16.21■□□□□ 0.19
PHTF1-206ENST00000412670 HECW2Q9P2P5 1572 aa16.21■□□□□ 0.18
PHTF1-206ENST00000412670 ATP10AO60312 1499 aa16.2■□□□□ 0.18
PHTF1-206ENST00000412670 MBD5Q9P267 1494 aa16.2■□□□□ 0.18
PHTF1-206ENST00000412670 SPAG9O60271 1321 aaKnown RBP16.19■□□□□ 0.18
PHTF1-206ENST00000412670 CAMSAP2Q08AD1 1489 aa16.19■□□□□ 0.18
PHTF1-206ENST00000412670 MYT1LQ9UL68 1186 aa16.19■□□□□ 0.18
PHTF1-206ENST00000412670 C9orf84Q5VXU9 1444 aa16.19■□□□□ 0.18
PHTF1-206ENST00000412670 YEATS2Q9ULM3 1422 aa16.19■□□□□ 0.18
PHTF1-206ENST00000412670 ZNF644Q9H582 1327 aaPredicted RBP16.19■□□□□ 0.18
PHTF1-206ENST00000412670 RTEL1-TNFRSF6BF6WH68 1400 aa16.18■□□□□ 0.18
PHTF1-206ENST00000412670 CCDC141Q6ZP82 1450 aa16.16■□□□□ 0.18
PHTF1-206ENST00000412670 ARHGEF5Q12774 1597 aa16.16■□□□□ 0.18
PHTF1-206ENST00000412670 REREQ9P2R6 1566 aa16.16■□□□□ 0.18
PHTF1-206ENST00000412670 ARID4BQ4LE39 1312 aaPredicted RBP16.16■□□□□ 0.18
PHTF1-206ENST00000412670 KDM4FA0A1W2PPD8 638 aa16.15■□□□□ 0.18
PHTF1-206ENST00000412670 TSPY4P0CV99 314 aa16.15■□□□□ 0.18
PHTF1-206ENST00000412670 TSPY10P0CW01 314 aa16.15■□□□□ 0.18
PHTF1-206ENST00000412670 FGD6Q6ZV73 1430 aa16.14■□□□□ 0.17
PHTF1-206ENST00000412670 DIP2CQ9Y2E4 1556 aa16.13■□□□□ 0.17
PHTF1-206ENST00000412670 ATP7AQ04656 1500 aa16.13■□□□□ 0.17
PHTF1-206ENST00000412670 INO80Q9ULG1 1556 aaPredicted RBP16.13■□□□□ 0.17
PHTF1-206ENST00000412670 TCOF1Q13428 1488 aaKnown RBP16.12■□□□□ 0.17
PHTF1-206ENST00000412670 KIDINS220Q9ULH0 1771 aa16.12■□□□□ 0.17
PHTF1-206ENST00000412670 AGLP35573 1532 aa16.11■□□□□ 0.17
PHTF1-206ENST00000412670 ABCA6Q8N139 1617 aa16.1■□□□□ 0.17
PHTF1-206ENST00000412670 PTPN23Q9H3S7 1636 aa16.1■□□□□ 0.17
PHTF1-206ENST00000412670 BCORL1Q5H9F3 1711 aa16.08■□□□□ 0.17
PHTF1-206ENST00000412670 SHANK2Q9UPX8 1470 aa16.07■□□□□ 0.16
PHTF1-206ENST00000412670 MAST1Q9Y2H9 1570 aa16.07■□□□□ 0.16
PHTF1-206ENST00000412670 ADAMTSL3P82987 1691 aa16.07■□□□□ 0.16
PHTF1-206ENST00000412670 A2MP01023 1474 aa16.06■□□□□ 0.16
PHTF1-206ENST00000412670 DHX29Q7Z478 1369 aaKnown RBP16.05■□□□□ 0.16
PHTF1-206ENST00000412670 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.05■□□□□ 0.16
PHTF1-206ENST00000412670 ADGBQ8N7X0 1667 aa16.05■□□□□ 0.16
PHTF1-206ENST00000412670 PLXNC1O60486 1568 aa16.04■□□□□ 0.16
PHTF1-206ENST00000412670 DAPK1P53355 1430 aa16.03■□□□□ 0.16
PHTF1-206ENST00000412670 ABCC5O15440 1437 aa16.02■□□□□ 0.16
PHTF1-206ENST00000412670 DNMT1P26358 1616 aaKnown RBP16.02■□□□□ 0.16
PHTF1-206ENST00000412670 SIGLEC1Q9BZZ2 1709 aa16.02■□□□□ 0.15
PHTF1-206ENST00000412670 FAM50AQ14320 339 aaKnown RBP16.01■□□□□ 0.15
PHTF1-206ENST00000412670 MLECQ14165 292 aa16■□□□□ 0.15
PHTF1-206ENST00000412670 ESF1Q9H501 851 aaKnown RBP16■□□□□ 0.15
PHTF1-206ENST00000412670 PTPRMP28827 1452 aa15.99■□□□□ 0.15
PHTF1-206ENST00000412670 MADDQ8WXG6 1647 aa15.99■□□□□ 0.15
PHTF1-206ENST00000412670 CNTLNQ9NXG0 1405 aa15.99■□□□□ 0.15
PHTF1-206ENST00000412670 CROCC2H7BZ55 1655 aa15.98■□□□□ 0.15
PHTF1-206ENST00000412670 ANKRD30AQ9BXX3 1397 aa15.98■□□□□ 0.15
PHTF1-206ENST00000412670 RRBP1Q9P2E9 1410 aaKnown RBP15.96■□□□□ 0.15
PHTF1-206ENST00000412670 DUOX2Q9NRD8 1548 aa15.96■□□□□ 0.15
PHTF1-206ENST00000412670 FAM135AQ9P2D6 1515 aa15.96■□□□□ 0.15
PHTF1-206ENST00000412670 PPARGC1BQ86YN6 1023 aaKnown RBP15.96■□□□□ 0.15
PHTF1-206ENST00000412670 KIF15Q9NS87 1388 aa15.95■□□□□ 0.14
PHTF1-206ENST00000412670 ADGRL2O95490 1459 aa15.95■□□□□ 0.14
PHTF1-206ENST00000412670 FER1L4A9Z1Z3 1794 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms