RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 ABCA8O94911 1581 aa14.17□□□□□ -0.14
SMPD4-203ENST00000412570 EFCAB2Q5VUJ9 269 aa14.16□□□□□ -0.14
SMPD4-203ENST00000412570 ARHGAP5Q13017 1502 aa14.16□□□□□ -0.14
SMPD4-203ENST00000412570 GPATCH8Q9UKJ3 1502 aaKnown RBP14.16□□□□□ -0.14
SMPD4-203ENST00000412570 DHX57Q6P158 1386 aaKnown RBP14.15□□□□□ -0.14
SMPD4-203ENST00000412570 CNGB1Q14028 1251 aaPredicted RBP14.15□□□□□ -0.14
SMPD4-203ENST00000412570 MLECQ14165 292 aa14.15□□□□□ -0.14
SMPD4-203ENST00000412570 ASXL2Q76L83 1435 aa14.14□□□□□ -0.15
SMPD4-203ENST00000412570 PTPN23Q9H3S7 1636 aa14.14□□□□□ -0.15
SMPD4-203ENST00000412570 MAP3K1Q13233 1512 aa14.14□□□□□ -0.15
SMPD4-203ENST00000412570 ABCC2Q92887 1545 aa14.14□□□□□ -0.15
SMPD4-203ENST00000412570 CAMSAP2Q08AD1 1489 aa14.11□□□□□ -0.15
SMPD4-203ENST00000412570 GGT6Q6P531 493 aa14.1□□□□□ -0.15
SMPD4-203ENST00000412570 ABCC5O15440 1437 aa14.1□□□□□ -0.15
SMPD4-203ENST00000412570 RGL3Q3MIN7 710 aa14.1□□□□□ -0.15
SMPD4-203ENST00000412570 KDM2AQ9Y2K7 1162 aa14.09□□□□□ -0.15
SMPD4-203ENST00000412570 SHROOM2Q13796 1616 aa14.09□□□□□ -0.15
SMPD4-203ENST00000412570 DAPK1P53355 1430 aa14.08□□□□□ -0.16
SMPD4-203ENST00000412570 ADCY10Q96PN6 1610 aa14.08□□□□□ -0.16
SMPD4-203ENST00000412570 MPHOSPH9Q99550 1183 aa14.08□□□□□ -0.16
SMPD4-203ENST00000412570 SPAG9O60271 1321 aaKnown RBP14.07□□□□□ -0.16
SMPD4-203ENST00000412570 PKD2Q13563 968 aa14.07□□□□□ -0.16
SMPD4-203ENST00000412570 POLR3GLQ9BT43 218 aa14.07□□□□□ -0.16
SMPD4-203ENST00000412570 ZCCHC11Q5TAX3 1644 aaKnown RBP14.07□□□□□ -0.16
SMPD4-203ENST00000412570 TTC37Q6PGP7 1564 aa14.06□□□□□ -0.16
SMPD4-203ENST00000412570 KIF3BO15066 747 aa14.06□□□□□ -0.16
SMPD4-203ENST00000412570 NAIPQ13075 1403 aa14.06□□□□□ -0.16
SMPD4-203ENST00000412570 NUP155O75694 1391 aa14.05□□□□□ -0.16
SMPD4-203ENST00000412570 SCAPERQ9BY12 1400 aa14.05□□□□□ -0.16
SMPD4-203ENST00000412570 CHGAP10645 457 aaKnown RBP14.04□□□□□ -0.16
SMPD4-203ENST00000412570 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.04□□□□□ -0.161e-6■■■■□ 23.9
SMPD4-203ENST00000412570 KIF15Q9NS87 1388 aa14.03□□□□□ -0.16
SMPD4-203ENST00000412570 WDR7Q9Y4E6 1490 aa14.03□□□□□ -0.16
SMPD4-203ENST00000412570 SYCP2Q9BX26 1530 aa14.02□□□□□ -0.16
SMPD4-203ENST00000412570 CD109Q6YHK3 1445 aa14.02□□□□□ -0.16
SMPD4-203ENST00000412570 TRAPPC8Q9Y2L5 1435 aa14.02□□□□□ -0.16
SMPD4-203ENST00000412570 ANKRD30AQ9BXX3 1397 aa14.02□□□□□ -0.16
SMPD4-203ENST00000412570 KDM6BO15054 1643 aa14.02□□□□□ -0.17
SMPD4-203ENST00000412570 C9orf84Q5VXU9 1444 aa14.02□□□□□ -0.17
SMPD4-203ENST00000412570 MIA2Q96PC5 1412 aa14.02□□□□□ -0.17
SMPD4-203ENST00000412570 RIMBP3CA6NJZ7 1639 aa14.01□□□□□ -0.17
SMPD4-203ENST00000412570 RIMBP3BA6NNM3 1639 aa14.01□□□□□ -0.17
SMPD4-203ENST00000412570 RIMBP3Q9UFD9 1639 aa14.01□□□□□ -0.17
SMPD4-203ENST00000412570 ABCC10Q5T3U5 1492 aa14.01□□□□□ -0.17
SMPD4-203ENST00000412570 KDM5BQ9UGL1 1544 aa14□□□□□ -0.17
SMPD4-203ENST00000412570 ARID4BQ4LE39 1312 aaPredicted RBP14□□□□□ -0.17
SMPD4-203ENST00000412570 TONSLQ96HA7 1378 aa13.99□□□□□ -0.17
SMPD4-203ENST00000412570 FANCAO15360 1455 aa13.99□□□□□ -0.17
SMPD4-203ENST00000412570 NUTM2DQ5VT03 806 aaPredicted RBP13.97□□□□□ -0.17
SMPD4-203ENST00000412570 HFM1A2PYH4 1435 aa13.97□□□□□ -0.17
SMPD4-203ENST00000412570 ANKRD50Q9ULJ7 1429 aa13.97□□□□□ -0.17
SMPD4-203ENST00000412570 NCOA1Q15788 1441 aa13.96□□□□□ -0.17
SMPD4-203ENST00000412570 ARHGEF12Q9NZN5 1544 aa13.96□□□□□ -0.17
SMPD4-203ENST00000412570 TSPOAP1O95153 1857 aa13.96□□□□□ -0.18
SMPD4-203ENST00000412570 PLCH2O75038 1416 aa13.95□□□□□ -0.18
SMPD4-203ENST00000412570 CDC42BPAQ5VT25 1732 aa13.95□□□□□ -0.18
SMPD4-203ENST00000412570 ADGRL1O94910 1474 aa13.95□□□□□ -0.18
SMPD4-203ENST00000412570 YTHDC1Q96MU7 727 aaKnown RBP13.94□□□□□ -0.18
SMPD4-203ENST00000412570 SAMD9LQ8IVG5 1584 aa13.93□□□□□ -0.18
SMPD4-203ENST00000412570 L3MBTL2Q969R5 705 aa13.92□□□□□ -0.18
SMPD4-203ENST00000412570 PLEKHH2Q8IVE3 1493 aa13.92□□□□□ -0.18
SMPD4-203ENST00000412570 AKNAQ7Z591 1439 aa13.92□□□□□ -0.18
SMPD4-203ENST00000412570 TCOF1Q13428 1488 aaKnown RBP13.92□□□□□ -0.18
SMPD4-203ENST00000412570 DIEXFQ68CQ4 756 aaKnown RBP13.91□□□□□ -0.18
SMPD4-203ENST00000412570 UHRF1BP1LA0JNW5 1464 aa13.91□□□□□ -0.18
SMPD4-203ENST00000412570 ZNF316A6NFI3 1004 aaPredicted RBP13.9□□□□□ -0.18
SMPD4-203ENST00000412570 CCDC141Q6ZP82 1450 aa13.9□□□□□ -0.18
SMPD4-203ENST00000412570 CDC42BPBQ9Y5S2 1711 aa13.9□□□□□ -0.18
SMPD4-203ENST00000412570 DCAF11Q8TEB1 546 aa13.9□□□□□ -0.18
SMPD4-203ENST00000412570 MBD5Q9P267 1494 aa13.89□□□□□ -0.19
SMPD4-203ENST00000412570 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.89□□□□□ -0.194e-10■■■■■ 33.4
SMPD4-203ENST00000412570 MAPKBP1O60336 1514 aa13.88□□□□□ -0.19
SMPD4-203ENST00000412570 ITSN2Q9NZM3 1697 aa13.88□□□□□ -0.19
SMPD4-203ENST00000412570 DNMT1P26358 1616 aaKnown RBP13.86□□□□□ -0.19
SMPD4-203ENST00000412570 DDX10Q13206 875 aaKnown RBP13.85□□□□□ -0.19
SMPD4-203ENST00000412570 WASHC2CQ9Y4E1 1318 aa13.85□□□□□ -0.19
SMPD4-203ENST00000412570 RSPH4AQ5TD94 716 aa13.85□□□□□ -0.19
SMPD4-203ENST00000412570 MYO5CQ9NQX4 1742 aa13.85□□□□□ -0.19
SMPD4-203ENST00000412570 PREX2Q70Z35 1606 aa13.83□□□□□ -0.2
SMPD4-203ENST00000412570 PPP1R15AO75807 674 aaPredicted RBP13.82□□□□□ -0.2
SMPD4-203ENST00000412570 ESF1Q9H501 851 aaKnown RBP13.82□□□□□ -0.2
SMPD4-203ENST00000412570 DNAJC5Q9H3Z4 198 aa13.81□□□□□ -0.2
SMPD4-203ENST00000412570 CFAP65Q6ZU64 1925 aaKnown RBP13.81□□□□□ -0.2
SMPD4-203ENST00000412570 YEATS2Q9ULM3 1422 aa13.8□□□□□ -0.2
SMPD4-203ENST00000412570 ROCK1Q13464 1354 aa13.8□□□□□ -0.2
SMPD4-203ENST00000412570 NBPF8Q3BBV2 869 aa13.8□□□□□ -0.2
SMPD4-203ENST00000412570 FBXO31Q5XUX0 539 aaPredicted RBP13.79□□□□□ -0.2
SMPD4-203ENST00000412570 STAG3Q9UJ98 1225 aa13.78□□□□□ -0.2
SMPD4-203ENST00000412570 CEBPAP49715 358 aaPredicted RBP13.78□□□□□ -0.2
SMPD4-203ENST00000412570 SENP3-EIF4A1A0A087X0R7 540 aa13.78□□□□□ -0.2
SMPD4-203ENST00000412570 BCANQ96GW7 911 aa13.77□□□□□ -0.2
SMPD4-203ENST00000412570 DENND4BO75064 1496 aaPredicted RBP13.76□□□□□ -0.21
SMPD4-203ENST00000412570 MIER1Q8N108 512 aa13.75□□□□□ -0.21
SMPD4-203ENST00000412570 ABCC1P33527 1531 aa13.75□□□□□ -0.21
SMPD4-203ENST00000412570 PZPP20742 1482 aa13.75□□□□□ -0.21
SMPD4-203ENST00000412570 CLSPNQ9HAW4 1339 aa13.74□□□□□ -0.21
SMPD4-203ENST00000412570 KIAA1107Q9UPP5 1409 aa13.74□□□□□ -0.21
SMPD4-203ENST00000412570 SAFB2Q14151 953 aaKnown RBP eCLIP13.73□□□□□ -0.21
SMPD4-203ENST00000412570 ANKRD30BQ9BXX2 1392 aa13.73□□□□□ -0.21
SMPD4-203ENST00000412570 HSPA5P11021 654 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms