RNA–Protein interactions for RNA: ENST00000411463.2

R3HCC1-202, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS P5 TSL 5 BASIC

Gene R3HCC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-202ENST00000411463 PREX2Q70Z35 1606 aa37.13■■■■□ 3.53
R3HCC1-202ENST00000411463 CCNB3Q8WWL7 1395 aa37.11■■■■□ 3.53
R3HCC1-202ENST00000411463 GPATCH8Q9UKJ3 1502 aaKnown RBP37.11■■■■□ 3.53
R3HCC1-202ENST00000411463 MAP3K1Q13233 1512 aa37.1■■■■□ 3.53
R3HCC1-202ENST00000411463 CDC42BPBQ9Y5S2 1711 aa37.1■■■■□ 3.53
R3HCC1-202ENST00000411463 FRMPD1Q5SYB0 1578 aa37.1■■■■□ 3.53
R3HCC1-202ENST00000411463 APLP2Q06481 763 aa37.07■■■■□ 3.52
R3HCC1-202ENST00000411463 CDC42BPAQ5VT25 1732 aa37.06■■■■□ 3.52
R3HCC1-202ENST00000411463 LRRC9Q6ZRR7 1453 aa37.06■■■■□ 3.52
R3HCC1-202ENST00000411463 POGZQ7Z3K3 1410 aa37.04■■■■□ 3.52
R3HCC1-202ENST00000411463 RICTORQ6R327 1708 aa37.04■■■■□ 3.52
R3HCC1-202ENST00000411463 CFDP1Q9UEE9 299 aaPredicted RBP37.03■■■■□ 3.52
R3HCC1-202ENST00000411463 KANK4Q5T7N3 995 aaPredicted RBP37.02■■■■□ 3.52
R3HCC1-202ENST00000411463 ZNF777Q9ULD5 760 aaPredicted RBP37.02■■■■□ 3.52
R3HCC1-202ENST00000411463 NCOA2Q15596 1464 aa36.99■■■■□ 3.51
R3HCC1-202ENST00000411463 SUPT6HQ7KZ85 1726 aaKnown RBP36.97■■■■□ 3.51
R3HCC1-202ENST00000411463 ZMYM4Q5VZL5 1548 aa36.95■■■■□ 3.51
R3HCC1-202ENST00000411463 AFAP1Q8N556 730 aa36.94■■■■□ 3.5
R3HCC1-202ENST00000411463 ABCC1P33527 1531 aa36.94■■■■□ 3.5
R3HCC1-202ENST00000411463 ZNF518AQ6AHZ1 1483 aa36.94■■■■□ 3.5
R3HCC1-202ENST00000411463 MAGI2Q86UL8 1455 aa36.92■■■■□ 3.5
R3HCC1-202ENST00000411463 ARHGEF12Q9NZN5 1544 aa36.92■■■■□ 3.5
R3HCC1-202ENST00000411463 SAMD9LQ8IVG5 1584 aa36.9■■■■□ 3.5
R3HCC1-202ENST00000411463 KDM4FA0A1W2PPD8 638 aa36.88■■■■□ 3.5
R3HCC1-202ENST00000411463 ITSN2Q9NZM3 1697 aa36.87■■■■□ 3.49
R3HCC1-202ENST00000411463 TRAPPC8Q9Y2L5 1435 aa36.87■■■■□ 3.49
R3HCC1-202ENST00000411463 YEATS2Q9ULM3 1422 aa36.85■■■■□ 3.49
R3HCC1-202ENST00000411463 PLEKHH2Q8IVE3 1493 aa36.85■■■■□ 3.49
R3HCC1-202ENST00000411463 ZFYVE16Q7Z3T8 1539 aa36.85■■■■□ 3.49
R3HCC1-202ENST00000411463 ARHGEF40Q8TER5 1519 aa36.85■■■■□ 3.49
R3HCC1-202ENST00000411463 KIAA1107Q9UPP5 1409 aa36.85■■■■□ 3.49
R3HCC1-202ENST00000411463 HNRNPMP52272 730 aaKnown RBP eCLIP36.84■■■■□ 3.49
R3HCC1-202ENST00000411463 KDM5CP41229 1560 aa36.84■■■■□ 3.49
R3HCC1-202ENST00000411463 AEBP2Q6ZN18 517 aaPredicted RBP36.83■■■■□ 3.49
R3HCC1-202ENST00000411463 ZNF644Q9H582 1327 aaPredicted RBP36.83■■■■□ 3.49
R3HCC1-202ENST00000411463 SYCP2Q9BX26 1530 aa36.81■■■■□ 3.48
R3HCC1-202ENST00000411463 MYT1LQ9UL68 1186 aa36.8■■■■□ 3.48
R3HCC1-202ENST00000411463 MLH3Q9UHC1 1453 aa36.75■■■■□ 3.47
R3HCC1-202ENST00000411463 ARID4BQ4LE39 1312 aaPredicted RBP36.75■■■■□ 3.47
R3HCC1-202ENST00000411463 HECW2Q9P2P5 1572 aa36.73■■■■□ 3.47
R3HCC1-202ENST00000411463 ATP10AO60312 1499 aa36.72■■■■□ 3.47
R3HCC1-202ENST00000411463 MYOM3Q5VTT5 1437 aa36.71■■■■□ 3.47
R3HCC1-202ENST00000411463 SPAG9O60271 1321 aaKnown RBP36.69■■■■□ 3.46
R3HCC1-202ENST00000411463 CAMSAP2Q08AD1 1489 aa36.69■■■■□ 3.46
R3HCC1-202ENST00000411463 MBD5Q9P267 1494 aa36.68■■■■□ 3.46
R3HCC1-202ENST00000411463 MIA2Q96PC5 1412 aa36.66■■■■□ 3.46
R3HCC1-202ENST00000411463 C9orf84Q5VXU9 1444 aa36.65■■■■□ 3.46
R3HCC1-202ENST00000411463 DIP2CQ9Y2E4 1556 aa36.61■■■■□ 3.45
R3HCC1-202ENST00000411463 RSPH4AQ5TD94 716 aa36.61■■■■□ 3.45
R3HCC1-202ENST00000411463 KIDINS220Q9ULH0 1771 aa36.59■■■■□ 3.45
R3HCC1-202ENST00000411463 ABCA6Q8N139 1617 aa36.58■■■■□ 3.45
R3HCC1-202ENST00000411463 ATP7AQ04656 1500 aa36.55■■■■□ 3.44
R3HCC1-202ENST00000411463 CCDC141Q6ZP82 1450 aa36.55■■■■□ 3.44
R3HCC1-202ENST00000411463 SIGLEC1Q9BZZ2 1709 aa36.55■■■■□ 3.44
R3HCC1-202ENST00000411463 BCORL1Q5H9F3 1711 aa36.54■■■■□ 3.44
R3HCC1-202ENST00000411463 INO80Q9ULG1 1556 aaPredicted RBP36.52■■■■□ 3.44
R3HCC1-202ENST00000411463 REREQ9P2R6 1566 aa36.51■■■■□ 3.44
R3HCC1-202ENST00000411463 ADAMTSL3P82987 1691 aa36.5■■■■□ 3.43
R3HCC1-202ENST00000411463 MLECQ14165 292 aa36.5■■■■□ 3.43
R3HCC1-202ENST00000411463 ARHGEF5Q12774 1597 aa36.5■■■■□ 3.43
R3HCC1-202ENST00000411463 RTEL1-TNFRSF6BF6WH68 1400 aa36.49■■■■□ 3.43
R3HCC1-202ENST00000411463 FGD6Q6ZV73 1430 aa36.49■■■■□ 3.43
R3HCC1-202ENST00000411463 TSPY4P0CV99 314 aa36.48■■■■□ 3.43
R3HCC1-202ENST00000411463 TSPY10P0CW01 314 aa36.48■■■■□ 3.43
R3HCC1-202ENST00000411463 PTPN23Q9H3S7 1636 aa36.43■■■■□ 3.42
R3HCC1-202ENST00000411463 PPARGC1BQ86YN6 1023 aaKnown RBP36.43■■■■□ 3.42
R3HCC1-202ENST00000411463 AGLP35573 1532 aa36.42■■■■□ 3.42
R3HCC1-202ENST00000411463 MADDQ8WXG6 1647 aa36.41■■■■□ 3.42
R3HCC1-202ENST00000411463 A2MP01023 1474 aa36.4■■■■□ 3.42
R3HCC1-202ENST00000411463 TCOF1Q13428 1488 aaKnown RBP36.39■■■■□ 3.42
R3HCC1-202ENST00000411463 PTPRMP28827 1452 aa36.37■■■■□ 3.41
R3HCC1-202ENST00000411463 PLXNC1O60486 1568 aa36.32■■■■□ 3.4
R3HCC1-202ENST00000411463 ADGBQ8N7X0 1667 aa36.31■■■■□ 3.4
R3HCC1-202ENST00000411463 ABCC5O15440 1437 aa36.3■■■■□ 3.4
R3HCC1-202ENST00000411463 DHX29Q7Z478 1369 aaKnown RBP36.3■■■■□ 3.4
R3HCC1-202ENST00000411463 MAST1Q9Y2H9 1570 aa36.29■■■■□ 3.4
R3HCC1-202ENST00000411463 FAM50AQ14320 339 aaKnown RBP36.29■■■■□ 3.4
R3HCC1-202ENST00000411463 RIMS1Q86UR5 1692 aaKnown RBP36.27■■■■□ 3.4
R3HCC1-202ENST00000411463 DAPK1P53355 1430 aa36.26■■■■□ 3.39
R3HCC1-202ENST00000411463 FER1L4A9Z1Z3 1794 aa36.24■■■■□ 3.39
R3HCC1-202ENST00000411463 ESF1Q9H501 851 aaKnown RBP36.23■■■■□ 3.39
R3HCC1-202ENST00000411463 SHANK2Q9UPX8 1470 aa36.22■■■■□ 3.39
R3HCC1-202ENST00000411463 DNMT1P26358 1616 aaKnown RBP36.22■■■■□ 3.39
R3HCC1-202ENST00000411463 GGT6Q6P531 493 aa36.19■■■■□ 3.38
R3HCC1-202ENST00000411463 PLPPR3Q6T4P5 718 aa36.18■■■■□ 3.38
R3HCC1-202ENST00000411463 KIF3BO15066 747 aa36.17■■■■□ 3.38
R3HCC1-202ENST00000411463 CROCC2H7BZ55 1655 aa36.16■■■■□ 3.38
R3HCC1-202ENST00000411463 CHIC2Q9UKJ5 165 aa36.14■■■■□ 3.38
R3HCC1-202ENST00000411463 CNTLNQ9NXG0 1405 aa36.12■■■■□ 3.37
R3HCC1-202ENST00000411463 RRP7BPQ9NSQ0 103 aa36.11■■■■□ 3.37
R3HCC1-202ENST00000411463 CEBPAP49715 358 aaPredicted RBP36.11■■■■□ 3.37
R3HCC1-202ENST00000411463 PPP6R1Q9UPN7 881 aa36.11■■■■□ 3.37
R3HCC1-202ENST00000411463 KIF15Q9NS87 1388 aa36.1■■■■□ 3.37
R3HCC1-202ENST00000411463 ANKRD30AQ9BXX3 1397 aa36.09■■■■□ 3.37
R3HCC1-202ENST00000411463 DUOX2Q9NRD8 1548 aa36.07■■■■□ 3.36
R3HCC1-202ENST00000411463 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.05■■■■□ 3.36
R3HCC1-202ENST00000411463 NCOA1Q15788 1441 aa36.03■■■■□ 3.36
R3HCC1-202ENST00000411463 ADGRL2O95490 1459 aa36■■■■□ 3.35
R3HCC1-202ENST00000411463 ZMYM3Q14202 1370 aa36■■■■□ 3.35
R3HCC1-202ENST00000411463 PTPRKQ15262 1439 aa35.98■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms