RNA–Protein interactions for RNA: ENST00000411042.1

RN7SKP228-201, Transcript of RNA, 7SK small nuclear pseudogene 228, humanhuman

BASIC

Gene RN7SKP228, Length 263 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP228-201ENST00000411042 SETD5Q9C0A6 1442 aa15.72■□□□□ 0.11
RN7SKP228-201ENST00000411042 FAM50AQ14320 339 aaKnown RBP15.72■□□□□ 0.11
RN7SKP228-201ENST00000411042 ITSN2Q9NZM3 1697 aa15.7■□□□□ 0.1
RN7SKP228-201ENST00000411042 HOXD11P31277 338 aaPredicted RBP15.68■□□□□ 0.1
RN7SKP228-201ENST00000411042 KIF14Q15058 1648 aa15.68■□□□□ 0.1
RN7SKP228-201ENST00000411042 HFM1A2PYH4 1435 aa15.68■□□□□ 0.1
RN7SKP228-201ENST00000411042 DMRT2Q9Y5R5 561 aa15.66■□□□□ 0.1
RN7SKP228-201ENST00000411042 KDM5BQ9UGL1 1544 aa15.66■□□□□ 0.1
RN7SKP228-201ENST00000411042 ABCC10Q5T3U5 1492 aa15.65■□□□□ 0.1
RN7SKP228-201ENST00000411042 GPATCH8Q9UKJ3 1502 aaKnown RBP15.65■□□□□ 0.1
RN7SKP228-201ENST00000411042 ERCC6L2Q5T890 1561 aa15.65■□□□□ 0.1
RN7SKP228-201ENST00000411042 ROCK1Q13464 1354 aa15.64■□□□□ 0.09
RN7SKP228-201ENST00000411042 DHX57Q6P158 1386 aaKnown RBP15.64■□□□□ 0.09
RN7SKP228-201ENST00000411042 RAB3GAP2Q9H2M9 1393 aa15.64■□□□□ 0.09
RN7SKP228-201ENST00000411042 DNMT1P26358 1616 aaKnown RBP15.61■□□□□ 0.09
RN7SKP228-201ENST00000411042 RSPH4AQ5TD94 716 aa15.6■□□□□ 0.09
RN7SKP228-201ENST00000411042 CFDP1Q9UEE9 299 aaPredicted RBP15.6■□□□□ 0.09
RN7SKP228-201ENST00000411042 PTPRKQ15262 1439 aa15.6■□□□□ 0.09
RN7SKP228-201ENST00000411042 ITGAEP38570 1179 aa15.59■□□□□ 0.09
RN7SKP228-201ENST00000411042 NAIPQ13075 1403 aa15.59■□□□□ 0.09
RN7SKP228-201ENST00000411042 ARID3CA6NKF2 412 aa15.58■□□□□ 0.08
RN7SKP228-201ENST00000411042 CDC42BPAQ5VT25 1732 aa15.57■□□□□ 0.08
RN7SKP228-201ENST00000411042 DAPK1P53355 1430 aa15.57■□□□□ 0.08
RN7SKP228-201ENST00000411042 GCC2Q8IWJ2 1684 aa15.56■□□□□ 0.08
RN7SKP228-201ENST00000411042 ZCCHC11Q5TAX3 1644 aaKnown RBP15.55■□□□□ 0.08
RN7SKP228-201ENST00000411042 CAMSAP2Q08AD1 1489 aa15.55■□□□□ 0.08
RN7SKP228-201ENST00000411042 ABCC5O15440 1437 aa15.55■□□□□ 0.08
RN7SKP228-201ENST00000411042 TIMELESSQ9UNS1 1208 aa15.55■□□□□ 0.08
RN7SKP228-201ENST00000411042 ARAP3Q8WWN8 1544 aa15.54■□□□□ 0.08
RN7SKP228-201ENST00000411042 ADGRL2O95490 1459 aa15.54■□□□□ 0.08
RN7SKP228-201ENST00000411042 SHANK2Q9UPX8 1470 aa15.54■□□□□ 0.08
RN7SKP228-201ENST00000411042 RIMBP3CA6NJZ7 1639 aa15.54■□□□□ 0.08
RN7SKP228-201ENST00000411042 RIMBP3BA6NNM3 1639 aa15.54■□□□□ 0.08
RN7SKP228-201ENST00000411042 RIMBP3Q9UFD9 1639 aa15.54■□□□□ 0.08
RN7SKP228-201ENST00000411042 PLEKHH2Q8IVE3 1493 aa15.53■□□□□ 0.08
RN7SKP228-201ENST00000411042 PREX2Q70Z35 1606 aa15.53■□□□□ 0.08
RN7SKP228-201ENST00000411042 ARHGEF5Q12774 1597 aa15.53■□□□□ 0.08
RN7SKP228-201ENST00000411042 SLC4A2P04920 1241 aa15.52■□□□□ 0.08
RN7SKP228-201ENST00000411042 ATXN8OSP0DMR3 200 aa15.52■□□□□ 0.08
RN7SKP228-201ENST00000411042 AMER1Q5JTC6 1135 aaPredicted RBP15.52■□□□□ 0.08
RN7SKP228-201ENST00000411042 CYB5RLQ6IPT4 315 aa15.52■□□□□ 0.08
RN7SKP228-201ENST00000411042 KIAA1107Q9UPP5 1409 aa15.51■□□□□ 0.07
RN7SKP228-201ENST00000411042 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.5■□□□□ 0.07
RN7SKP228-201ENST00000411042 CROCC2H7BZ55 1655 aa15.49■□□□□ 0.07
RN7SKP228-201ENST00000411042 CDC42BPBQ9Y5S2 1711 aa15.48■□□□□ 0.07
RN7SKP228-201ENST00000411042 PLCH2O75038 1416 aa15.48■□□□□ 0.07
RN7SKP228-201ENST00000411042 NCOA1Q15788 1441 aa15.48■□□□□ 0.07
RN7SKP228-201ENST00000411042 MYO5CQ9NQX4 1742 aa15.48■□□□□ 0.07
RN7SKP228-201ENST00000411042 ADGBQ8N7X0 1667 aa15.48■□□□□ 0.07
RN7SKP228-201ENST00000411042 WDR7Q9Y4E6 1490 aa15.47■□□□□ 0.07
RN7SKP228-201ENST00000411042 MYCNP04198 464 aaPredicted RBP15.47■□□□□ 0.07
RN7SKP228-201ENST00000411042 MAPKBP1O60336 1514 aa15.47■□□□□ 0.07
RN7SKP228-201ENST00000411042 ANKRD30AQ9BXX3 1397 aa15.47■□□□□ 0.07
RN7SKP228-201ENST00000411042 MBD5Q9P267 1494 aa15.46■□□□□ 0.06
RN7SKP228-201ENST00000411042 ZNF644Q9H582 1327 aaPredicted RBP15.45■□□□□ 0.06
RN7SKP228-201ENST00000411042 TSPY4P0CV99 314 aa15.44■□□□□ 0.06
RN7SKP228-201ENST00000411042 TSPY10P0CW01 314 aa15.44■□□□□ 0.06
RN7SKP228-201ENST00000411042 TTC37Q6PGP7 1564 aa15.44■□□□□ 0.06
RN7SKP228-201ENST00000411042 TRHP20396 242 aaPredicted RBP15.43■□□□□ 0.06
RN7SKP228-201ENST00000411042 EFCAB2Q5VUJ9 269 aa15.43■□□□□ 0.06
RN7SKP228-201ENST00000411042 CCDC141Q6ZP82 1450 aa15.43■□□□□ 0.06
RN7SKP228-201ENST00000411042 MAST1Q9Y2H9 1570 aa15.43■□□□□ 0.06
RN7SKP228-201ENST00000411042 SAMD9LQ8IVG5 1584 aa15.42■□□□□ 0.06
RN7SKP228-201ENST00000411042 NPM1P06748 294 aaKnown RBP eCLIP15.42■□□□□ 0.06
RN7SKP228-201ENST00000411042 ABCA9Q8IUA7 1624 aa15.42■□□□□ 0.06
RN7SKP228-201ENST00000411042 ARHGAP5Q13017 1502 aa15.41■□□□□ 0.06
RN7SKP228-201ENST00000411042 C9orf84Q5VXU9 1444 aa15.41■□□□□ 0.06
RN7SKP228-201ENST00000411042 RRP7BPQ9NSQ0 103 aa15.4■□□□□ 0.06
RN7SKP228-201ENST00000411042 CHIC2Q9UKJ5 165 aa15.4■□□□□ 0.06
RN7SKP228-201ENST00000411042 SLC24A1O60721 1099 aa15.39■□□□□ 0.05
RN7SKP228-201ENST00000411042 RTN4Q9NQC3 1192 aaKnown RBP15.39■□□□□ 0.05
RN7SKP228-201ENST00000411042 ZNF777Q9ULD5 760 aaPredicted RBP15.39■□□□□ 0.05
RN7SKP228-201ENST00000411042 ASXL2Q76L83 1435 aa15.38■□□□□ 0.05
RN7SKP228-201ENST00000411042 ANKRD50Q9ULJ7 1429 aa15.35■□□□□ 0.05
RN7SKP228-201ENST00000411042 KCNH8Q96L42 1107 aa15.35■□□□□ 0.05
RN7SKP228-201ENST00000411042 RTEL1-TNFRSF6BF6WH68 1400 aa15.34■□□□□ 0.05
RN7SKP228-201ENST00000411042 PLXNC1O60486 1568 aa15.34■□□□□ 0.05
RN7SKP228-201ENST00000411042 ABCC1P33527 1531 aa15.33■□□□□ 0.05
RN7SKP228-201ENST00000411042 SYCP2Q9BX26 1530 aa15.33■□□□□ 0.04
RN7SKP228-201ENST00000411042 KDM5DQ9BY66 1539 aa15.33■□□□□ 0.04
RN7SKP228-201ENST00000411042 HNRNPMP52272 730 aaKnown RBP eCLIP15.32■□□□□ 0.04
RN7SKP228-201ENST00000411042 MPHOSPH9Q99550 1183 aa15.32■□□□□ 0.04
RN7SKP228-201ENST00000411042 KDM6BO15054 1643 aa15.32■□□□□ 0.04
RN7SKP228-201ENST00000411042 KIF15Q9NS87 1388 aa15.31■□□□□ 0.04
RN7SKP228-201ENST00000411042 CFAP74Q9C0B2 1584 aa15.3■□□□□ 0.04
RN7SKP228-201ENST00000411042 TRIM52Q96A61 297 aa15.29■□□□□ 0.04
RN7SKP228-201ENST00000411042 FANCAO15360 1455 aa15.28■□□□□ 0.04
RN7SKP228-201ENST00000411042 ZNF316A6NFI3 1004 aaPredicted RBP15.28■□□□□ 0.04
RN7SKP228-201ENST00000411042 DUOX2Q9NRD8 1548 aa15.27■□□□□ 0.04
RN7SKP228-201ENST00000411042 DENND4BO75064 1496 aaPredicted RBP15.27■□□□□ 0.04
RN7SKP228-201ENST00000411042 ARHGEF12Q9NZN5 1544 aa15.27■□□□□ 0.03
RN7SKP228-201ENST00000411042 ERBINQ96RT1 1412 aa15.26■□□□□ 0.03
RN7SKP228-201ENST00000411042 FKBP8Q14318 412 aa15.26■□□□□ 0.03
RN7SKP228-201ENST00000411042 PZPP20742 1482 aa15.26■□□□□ 0.03
RN7SKP228-201ENST00000411042 ANKRD30BQ9BXX2 1392 aa15.25■□□□□ 0.03
RN7SKP228-201ENST00000411042 GLI2P10070 1586 aa15.25■□□□□ 0.03
RN7SKP228-201ENST00000411042 PPP1R15AO75807 674 aaPredicted RBP15.24■□□□□ 0.03
RN7SKP228-201ENST00000411042 NEO1Q92859 1461 aa15.24■□□□□ 0.03
RN7SKP228-201ENST00000411042 CD109Q6YHK3 1445 aa15.23■□□□□ 0.03
RN7SKP228-201ENST00000411042 TONSLQ96HA7 1378 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms