RNA–Protein interactions for RNA: ENST00000410041.1

DYSF-209, Transcript of dysferlin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,594 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-209ENST00000410041 NLRP13Q86W25 1043 aa16.54■□□□□ 0.24
DYSF-209ENST00000410041 PDE4AP27815 886 aa16.53■□□□□ 0.24
DYSF-209ENST00000410041 SLKQ9H2G2 1235 aaPredicted RBP16.53■□□□□ 0.24
DYSF-209ENST00000410041 ESF1Q9H501 851 aaKnown RBP16.51■□□□□ 0.23
DYSF-209ENST00000410041 MSNP26038 577 aaKnown RBP16.51■□□□□ 0.23
DYSF-209ENST00000410041 NPM1P06748 294 aaKnown RBP eCLIP16.5■□□□□ 0.23
DYSF-209ENST00000410041 SPRYD3Q8NCJ5 442 aa16.49■□□□□ 0.23
DYSF-209ENST00000410041 GSE1Q14687 1217 aa16.49■□□□□ 0.23
DYSF-209ENST00000410041 ARID4BQ4LE39 1312 aaPredicted RBP16.49■□□□□ 0.23
DYSF-209ENST00000410041 GOLGA6L3A6NEY3 463 aa16.48■□□□□ 0.23
DYSF-209ENST00000410041 GBP4Q96PP9 640 aa16.47■□□□□ 0.23
DYSF-209ENST00000410041 PTMSP20962 102 aa16.47■□□□□ 0.23
DYSF-209ENST00000410041 RWDD1Q9H446 243 aaPredicted RBP16.47■□□□□ 0.23
DYSF-209ENST00000410041 RRP1P56182 461 aaKnown RBP16.45■□□□□ 0.22
DYSF-209ENST00000410041 GOLGA2Q08379 1002 aa16.45■□□□□ 0.22
DYSF-209ENST00000410041 MYBBP1AQ9BQG0 1328 aaKnown RBP16.45■□□□□ 0.22
DYSF-209ENST00000410041 RSPH6AQ9H0K4 717 aa16.45■□□□□ 0.22
DYSF-209ENST00000410041 GZF1Q9H116 711 aaPredicted RBP16.44■□□□□ 0.22
DYSF-209ENST00000410041 KIF15Q9NS87 1388 aa16.44■□□□□ 0.22
DYSF-209ENST00000410041 PHLDB1Q86UU1 1377 aa16.44■□□□□ 0.22
DYSF-209ENST00000410041 EXOC6Q8TAG9 804 aa16.44■□□□□ 0.22
DYSF-209ENST00000410041 SMARCA2P51531 1590 aa16.43■□□□□ 0.22
DYSF-209ENST00000410041 FHOD3Q2V2M9 1422 aa16.43■□□□□ 0.22
DYSF-209ENST00000410041 CFAP44Q96MT7 982 aa16.43■□□□□ 0.22
DYSF-209ENST00000410041 PMFBP1Q8TBY8 1022 aa16.42■□□□□ 0.22
DYSF-209ENST00000410041 U2SURPO15042 1029 aaKnown RBP16.42■□□□□ 0.22
DYSF-209ENST00000410041 CENPQQ7L2Z9 268 aaPredicted RBP16.42■□□□□ 0.22
DYSF-209ENST00000410041 NUP155O75694 1391 aa16.42■□□□□ 0.22
DYSF-209ENST00000410041 FAM161AQ3B820 660 aa16.42■□□□□ 0.22
DYSF-209ENST00000410041 EIF4G1Q04637 1599 aaKnown RBP16.42■□□□□ 0.22
DYSF-209ENST00000410041 MORC1Q86VD1 984 aa16.41■□□□□ 0.22
DYSF-209ENST00000410041 ANKRD30AQ9BXX3 1397 aa16.4■□□□□ 0.22
DYSF-209ENST00000410041 PLCB2Q00722 1185 aa16.4■□□□□ 0.22
DYSF-209ENST00000410041 CCDC18Q5T9S5 1454 aa16.4■□□□□ 0.22
DYSF-209ENST00000410041 IPO8O15397 1037 aaKnown RBP16.37■□□□□ 0.21
DYSF-209ENST00000410041 PLPPR3Q6T4P5 718 aa16.37■□□□□ 0.21
DYSF-209ENST00000410041 ZRSR1Q15695 479 aaKnown RBP16.36■□□□□ 0.21
DYSF-209ENST00000410041 CHAF1AQ13111 956 aaPredicted RBP16.36■□□□□ 0.21
DYSF-209ENST00000410041 TPRNQ4KMQ1 711 aa16.36■□□□□ 0.21
DYSF-209ENST00000410041 SLC4A3P48751 1232 aa16.36■□□□□ 0.21
DYSF-209ENST00000410041 KIF21BO75037 1637 aa16.35■□□□□ 0.21
DYSF-209ENST00000410041 MFAP1P55081 439 aaKnown RBP16.34■□□□□ 0.21
DYSF-209ENST00000410041 CENPJQ9HC77 1338 aaPredicted RBP16.33■□□□□ 0.21
DYSF-209ENST00000410041 ST20-MTHFSA0A0A6YYL1 179 aa16.33■□□□□ 0.2
DYSF-209ENST00000410041 CCDC7Q96M83 1385 aa16.33■□□□□ 0.2
DYSF-209ENST00000410041 CNTLNQ9NXG0 1405 aa16.33■□□□□ 0.2
DYSF-209ENST00000410041 PLIN1O60240 522 aa16.32■□□□□ 0.2
DYSF-209ENST00000410041 CRBNQ96SW2 442 aa16.32■□□□□ 0.2
DYSF-209ENST00000410041 SENP3Q9H4L4 574 aaPredicted RBP16.31■□□□□ 0.2
DYSF-209ENST00000410041 USP47Q96K76 1375 aa16.31■□□□□ 0.2
DYSF-209ENST00000410041 ITPRIPQ8IWB1 547 aa16.31■□□□□ 0.2
DYSF-209ENST00000410041 MCCP23508 829 aa16.3■□□□□ 0.2
DYSF-209ENST00000410041 RRBP1Q9P2E9 1410 aaKnown RBP16.3■□□□□ 0.2
DYSF-209ENST00000410041 POGKQ9P215 609 aa16.3■□□□□ 0.2
DYSF-209ENST00000410041 HSP90AA2PQ14568 343 aaPredicted RBP16.3■□□□□ 0.2
DYSF-209ENST00000410041 UACAQ9BZF9 1416 aa16.3■□□□□ 0.2
DYSF-209ENST00000410041 HAP1P54257 671 aaPredicted RBP16.29■□□□□ 0.2
DYSF-209ENST00000410041 DDX11L8A8MPP1 907 aa16.29■□□□□ 0.2
DYSF-209ENST00000410041 SMARCA4P51532 1647 aa16.28■□□□□ 0.2
DYSF-209ENST00000410041 U2AF1L5P0DN76 240 aaPredicted RBP16.28■□□□□ 0.2
DYSF-209ENST00000410041 U2AF1Q01081 240 aaKnown RBP eCLIP16.28■□□□□ 0.2
DYSF-209ENST00000410041 KANK1Q14678 1352 aa16.28■□□□□ 0.2
DYSF-209ENST00000410041 KIF7Q2M1P5 1343 aa16.28■□□□□ 0.2
DYSF-209ENST00000410041 KIAA2012Q0VF49 1180 aa16.28■□□□□ 0.2
DYSF-209ENST00000410041 CGNL1Q0VF96 1302 aa16.27■□□□□ 0.2
DYSF-209ENST00000410041 GOLGA6L6A8MZA4 724 aa16.27■□□□□ 0.2
DYSF-209ENST00000410041 WASHC2AQ641Q2 1341 aa16.27■□□□□ 0.2
DYSF-209ENST00000410041 TDRD9Q8NDG6 1382 aaKnown RBP16.27■□□□□ 0.19
DYSF-209ENST00000410041 CDK11BP21127 795 aaKnown RBP16.26■□□□□ 0.19
DYSF-209ENST00000410041 CCDC146Q8IYE0 955 aa16.26■□□□□ 0.19
DYSF-209ENST00000410041 CLUAP1Q96AJ1 413 aa16.26■□□□□ 0.19
DYSF-209ENST00000410041 NRDCO43847 1150 aa16.25■□□□□ 0.19
DYSF-209ENST00000410041 ATAD2BQ9ULI0 1458 aa16.25■□□□□ 0.19
DYSF-209ENST00000410041 GOLGA6L4A6NEF3 574 aa16.25■□□□□ 0.19
DYSF-209ENST00000410041 NFKBIBQ15653 356 aa16.24■□□□□ 0.19
DYSF-209ENST00000410041 EIF3AQ14152 1382 aaKnown RBP16.24■□□□□ 0.19
DYSF-209ENST00000410041 CALD1Q05682 793 aaKnown RBP16.24■□□□□ 0.19
DYSF-209ENST00000410041 PANK3Q9H999 370 aa16.24■□□□□ 0.19
DYSF-209ENST00000410041 SMC4Q9NTJ3 1288 aa16.24■□□□□ 0.19
DYSF-209ENST00000410041 FGD6Q6ZV73 1430 aa16.24■□□□□ 0.19
DYSF-209ENST00000410041 SYAP1Q96A49 352 aaPredicted RBP16.23■□□□□ 0.19
DYSF-209ENST00000410041 E9PSI1 815 aa16.23■□□□□ 0.19
DYSF-209ENST00000410041 PAK3O75914 559 aaPredicted RBP16.21■□□□□ 0.19
DYSF-209ENST00000410041 LRRC9Q6ZRR7 1453 aa16.21■□□□□ 0.18
DYSF-209ENST00000410041 SRPK2P78362 688 aaKnown RBP16.2■□□□□ 0.18
DYSF-209ENST00000410041 SKOR2Q2VWA4 1001 aaPredicted RBP16.2■□□□□ 0.18
DYSF-209ENST00000410041 CADPSQ9ULU8 1353 aa16.2■□□□□ 0.18
DYSF-209ENST00000410041 KCNJ4P48050 445 aa16.2■□□□□ 0.18
DYSF-209ENST00000410041 CARMIL2Q6F5E8 1435 aa16.19■□□□□ 0.18
DYSF-209ENST00000410041 VSIG10Q8N0Z9 540 aa16.18■□□□□ 0.18
DYSF-209ENST00000410041 IGF1RP08069 1367 aa16.18■□□□□ 0.18
DYSF-209ENST00000410041 OS9Q13438 667 aaPredicted RBP16.18■□□□□ 0.18
DYSF-209ENST00000410041 NGEFQ8N5V2 710 aa16.18■□□□□ 0.18
DYSF-209ENST00000410041 RSPH4AQ5TD94 716 aa16.17■□□□□ 0.18
DYSF-209ENST00000410041 MYOM3Q5VTT5 1437 aa16.17■□□□□ 0.18
DYSF-209ENST00000410041 DRC7Q8IY82 874 aa16.16■□□□□ 0.18
DYSF-209ENST00000410041 COG6Q9Y2V7 657 aa16.16■□□□□ 0.18
DYSF-209ENST00000410041 FGD1P98174 961 aa16.16■□□□□ 0.18
DYSF-209ENST00000410041 BRD4O60885 1362 aaPredicted RBP16.16■□□□□ 0.18
DYSF-209ENST00000410041 APBB1O00213 710 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms