RNA–Protein interactions for RNA: ENST00000409985.5

PMS1-205, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 1,882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-205ENST00000409985 PTPRKQ15262 1439 aa34.15■■■■□ 3.06
PMS1-205ENST00000409985 NAIPQ13075 1403 aa34.13■■■■□ 3.05
PMS1-205ENST00000409985 AKNAQ7Z591 1439 aa34.12■■■■□ 3.05
PMS1-205ENST00000409985 NPM1P06748 294 aaKnown RBP eCLIP34.12■■■■□ 3.05
PMS1-205ENST00000409985 ASXL2Q76L83 1435 aa34.11■■■■□ 3.05
PMS1-205ENST00000409985 MIA2Q96PC5 1412 aa34.11■■■■□ 3.05
PMS1-205ENST00000409985 SIN3AQ96ST3 1273 aa34.09■■■■□ 3.05
PMS1-205ENST00000409985 PPP1R15AO75807 674 aaPredicted RBP34.07■■■■□ 3.04
PMS1-205ENST00000409985 PLEKHD1A6NEE1 506 aa34.05■■■■□ 3.04
PMS1-205ENST00000409985 TROQ12816 1431 aaPredicted RBP34.04■■■■□ 3.04
PMS1-205ENST00000409985 WDR7Q9Y4E6 1490 aa34.03■■■■□ 3.04
PMS1-205ENST00000409985 GCC2Q8IWJ2 1684 aa34.02■■■■□ 3.04
PMS1-205ENST00000409985 CDK11AQ9UQ88 783 aaPredicted RBP34.01■■■■□ 3.04
PMS1-205ENST00000409985 KIF14Q15058 1648 aa34■■■■□ 3.03
PMS1-205ENST00000409985 KCNH8Q96L42 1107 aa33.97■■■■□ 3.03
PMS1-205ENST00000409985 TONSLQ96HA7 1378 aa33.91■■■■□ 3.02
PMS1-205ENST00000409985 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.87■■■■□ 3.01
PMS1-205ENST00000409985 ABCC10Q5T3U5 1492 aa33.87■■■■□ 3.01
PMS1-205ENST00000409985 TTC37Q6PGP7 1564 aa33.85■■■■□ 3.01
PMS1-205ENST00000409985 DIP2BQ9P265 1576 aa33.83■■■■□ 3.01
PMS1-205ENST00000409985 ROCK1Q13464 1354 aa33.81■■■■□ 3
PMS1-205ENST00000409985 ABCA9Q8IUA7 1624 aa33.77■■■■□ 3
PMS1-205ENST00000409985 KIF13AQ9H1H9 1805 aa33.77■■■■□ 3
PMS1-205ENST00000409985 FAM69CQ0P6D2 419 aa33.73■■■□□ 2.99
PMS1-205ENST00000409985 GLI2P10070 1586 aa33.73■■■□□ 2.99
PMS1-205ENST00000409985 DNMT1P26358 1616 aaKnown RBP33.73■■■□□ 2.99
PMS1-205ENST00000409985 GPATCH8Q9UKJ3 1502 aaKnown RBP33.72■■■□□ 2.99
PMS1-205ENST00000409985 CDC42BPAQ5VT25 1732 aa33.72■■■□□ 2.99
PMS1-205ENST00000409985 DAPK1P53355 1430 aa33.68■■■□□ 2.98
PMS1-205ENST00000409985 DENND4BO75064 1496 aaPredicted RBP33.67■■■□□ 2.98
PMS1-205ENST00000409985 DDX10Q13206 875 aaKnown RBP33.67■■■□□ 2.98
PMS1-205ENST00000409985 MAP3K4Q9Y6R4 1608 aa33.67■■■□□ 2.98
PMS1-205ENST00000409985 RRP7BPQ9NSQ0 103 aa33.66■■■□□ 2.98
PMS1-205ENST00000409985 CDC42BPBQ9Y5S2 1711 aa33.66■■■□□ 2.98
PMS1-205ENST00000409985 CCER2I3L3R5 266 aa33.65■■■□□ 2.98
PMS1-205ENST00000409985 CD109Q6YHK3 1445 aa33.63■■■□□ 2.97
PMS1-205ENST00000409985 MYO5CQ9NQX4 1742 aa33.63■■■□□ 2.97
PMS1-205ENST00000409985 PREX2Q70Z35 1606 aa33.62■■■□□ 2.97
PMS1-205ENST00000409985 PLCH2O75038 1416 aa33.62■■■□□ 2.97
PMS1-205ENST00000409985 KDM6BO15054 1643 aa33.62■■■□□ 2.97
PMS1-205ENST00000409985 ITSN2Q9NZM3 1697 aa33.6■■■□□ 2.97
PMS1-205ENST00000409985 ABCC5O15440 1437 aa33.6■■■□□ 2.97
PMS1-205ENST00000409985 CHIC2Q9UKJ5 165 aa33.59■■■□□ 2.97
PMS1-205ENST00000409985 PPRC1Q5VV67 1664 aaKnown RBP33.57■■■□□ 2.96
PMS1-205ENST00000409985 ZNF644Q9H582 1327 aaPredicted RBP33.56■■■□□ 2.96
PMS1-205ENST00000409985 TRHP20396 242 aaPredicted RBP33.56■■■□□ 2.96
PMS1-205ENST00000409985 MPHOSPH9Q99550 1183 aa33.56■■■□□ 2.96
PMS1-205ENST00000409985 TSPOAP1O95153 1857 aa33.55■■■□□ 2.96
PMS1-205ENST00000409985 CFDP1Q9UEE9 299 aaPredicted RBP33.54■■■□□ 2.96
PMS1-205ENST00000409985 ARHGAP5Q13017 1502 aa33.53■■■□□ 2.96
PMS1-205ENST00000409985 TRIM52Q96A61 297 aa33.52■■■□□ 2.96
PMS1-205ENST00000409985 ARAP3Q8WWN8 1544 aa33.51■■■□□ 2.95
PMS1-205ENST00000409985 ANP32CO43423 234 aa33.5■■■□□ 2.95
PMS1-205ENST00000409985 FANCAO15360 1455 aa33.48■■■□□ 2.95
PMS1-205ENST00000409985 SAMD9LQ8IVG5 1584 aa33.48■■■□□ 2.95
PMS1-205ENST00000409985 ZNF777Q9ULD5 760 aaPredicted RBP33.48■■■□□ 2.95
PMS1-205ENST00000409985 ADGBQ8N7X0 1667 aa33.46■■■□□ 2.95
PMS1-205ENST00000409985 ADGRL2O95490 1459 aa33.45■■■□□ 2.95
PMS1-205ENST00000409985 ANKRD30BQ9BXX2 1392 aa33.44■■■□□ 2.94
PMS1-205ENST00000409985 CAMSAP2Q08AD1 1489 aa33.43■■■□□ 2.94
PMS1-205ENST00000409985 RPRD2Q5VT52 1461 aaKnown RBP33.43■■■□□ 2.94
PMS1-205ENST00000409985 EFCAB2Q5VUJ9 269 aa33.43■■■□□ 2.94
PMS1-205ENST00000409985 ARHGEF12Q9NZN5 1544 aa33.41■■■□□ 2.94
PMS1-205ENST00000409985 CROCC2H7BZ55 1655 aa33.39■■■□□ 2.94
PMS1-205ENST00000409985 SUPT16HQ9Y5B9 1047 aaKnown RBP33.39■■■□□ 2.94
PMS1-205ENST00000409985 HIRIP3Q9BW71 556 aaPredicted RBP33.37■■■□□ 2.93
PMS1-205ENST00000409985 NCOA1Q15788 1441 aa33.36■■■□□ 2.93
PMS1-205ENST00000409985 ABCC1P33527 1531 aa33.35■■■□□ 2.93
PMS1-205ENST00000409985 NEO1Q92859 1461 aa33.35■■■□□ 2.93
PMS1-205ENST00000409985 SYCP2Q9BX26 1530 aa33.34■■■□□ 2.93
PMS1-205ENST00000409985 MBD5Q9P267 1494 aa33.33■■■□□ 2.93
PMS1-205ENST00000409985 HNRNPMP52272 730 aaKnown RBP eCLIP33.33■■■□□ 2.934e-6■■■■□ 23.6
PMS1-205ENST00000409985 EIF4G2P78344 907 aaKnown RBP eCLIP33.31■■■□□ 2.92
PMS1-205ENST00000409985 ADGRL1O94910 1474 aa33.3■■■□□ 2.92
PMS1-205ENST00000409985 TEX14Q8IWB6 1497 aa33.3■■■□□ 2.92
PMS1-205ENST00000409985 L3MBTL2Q969R5 705 aa33.29■■■□□ 2.92
PMS1-205ENST00000409985 CFAP74Q9C0B2 1584 aa33.29■■■□□ 2.92
PMS1-205ENST00000409985 SHANK2Q9UPX8 1470 aa33.28■■■□□ 2.92
PMS1-205ENST00000409985 SCAPERQ9BY12 1400 aa33.28■■■□□ 2.92
PMS1-205ENST00000409985 KIAA1107Q9UPP5 1409 aa33.28■■■□□ 2.92
PMS1-205ENST00000409985 COL17A1Q9UMD9 1497 aaPredicted RBP33.28■■■□□ 2.92
PMS1-205ENST00000409985 HSPA5P11021 654 aaKnown RBP33.27■■■□□ 2.92
PMS1-205ENST00000409985 PZPP20742 1482 aa33.27■■■□□ 2.92
PMS1-205ENST00000409985 TRAPPC8Q9Y2L5 1435 aa33.27■■■□□ 2.92
PMS1-205ENST00000409985 ANKRD30AQ9BXX3 1397 aa33.24■■■□□ 2.91
PMS1-205ENST00000409985 SLC4A1APQ9BWU0 796 aaKnown RBP33.23■■■□□ 2.91
PMS1-205ENST00000409985 PLEKHH2Q8IVE3 1493 aa33.23■■■□□ 2.91
PMS1-205ENST00000409985 AFAP1Q8N556 730 aa33.21■■■□□ 2.91
PMS1-205ENST00000409985 WASHC2AQ641Q2 1341 aa33.2■■■□□ 2.91
PMS1-205ENST00000409985 ARHGEF5Q12774 1597 aa33.2■■■□□ 2.91
PMS1-205ENST00000409985 RAPGEF3O95398 923 aa33.19■■■□□ 2.9
PMS1-205ENST00000409985 FRMPD1Q5SYB0 1578 aa33.17■■■□□ 2.9
PMS1-205ENST00000409985 POGZQ7Z3K3 1410 aa33.16■■■□□ 2.9
PMS1-205ENST00000409985 POLR1AO95602 1720 aaPredicted RBP33.15■■■□□ 2.9
PMS1-205ENST00000409985 RICTORQ6R327 1708 aa33.15■■■□□ 2.9
PMS1-205ENST00000409985 CCDC141Q6ZP82 1450 aa33.15■■■□□ 2.9
PMS1-205ENST00000409985 CNTLNQ9NXG0 1405 aa33.14■■■□□ 2.9
PMS1-205ENST00000409985 FOXD1Q16676 465 aa33.12■■■□□ 2.89
PMS1-205ENST00000409985 SPATA31E1Q6ZUB1 1445 aa33.12■■■□□ 2.89
PMS1-205ENST00000409985 KDM5DQ9BY66 1539 aa33.11■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms