RNA–Protein interactions for RNA: ENST00000409870.1

C2orf88-204, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C2orf88, Length 1,441 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-204ENST00000409870 PLCH2O75038 1416 aa40.26■■■■■ 4.04
C2orf88-204ENST00000409870 RAPGEF3O95398 923 aa40.25■■■■■ 4.03
C2orf88-204ENST00000409870 PREX2Q70Z35 1606 aa40.23■■■■■ 4.03
C2orf88-204ENST00000409870 RICTORQ6R327 1708 aa40.23■■■■■ 4.03
C2orf88-204ENST00000409870 KANK4Q5T7N3 995 aaPredicted RBP40.23■■■■■ 4.03
C2orf88-204ENST00000409870 CDC42BPAQ5VT25 1732 aa40.22■■■■■ 4.03
C2orf88-204ENST00000409870 AKNAQ7Z591 1439 aa40.21■■■■■ 4.03
C2orf88-204ENST00000409870 DENND4BO75064 1496 aaPredicted RBP40.19■■■■■ 4.02
C2orf88-204ENST00000409870 NCOA2Q15596 1464 aa40.19■■■■■ 4.02
C2orf88-204ENST00000409870 CDC42BPBQ9Y5S2 1711 aa40.18■■■■■ 4.02
C2orf88-204ENST00000409870 ARHGEF40Q8TER5 1519 aa40.15■■■■■ 4.02
C2orf88-204ENST00000409870 ARHGAP5Q13017 1502 aa40.14■■■■■ 4.02
C2orf88-204ENST00000409870 GPATCH8Q9UKJ3 1502 aaKnown RBP40.14■■■■■ 4.02
C2orf88-204ENST00000409870 CCNB3Q8WWL7 1395 aa40.11■■■■■ 4.01
C2orf88-204ENST00000409870 ITSN2Q9NZM3 1697 aa40.1■■■■■ 4.01
C2orf88-204ENST00000409870 ZMYM4Q5VZL5 1548 aa40.08■■■■■ 4.01
C2orf88-204ENST00000409870 EFCAB2Q5VUJ9 269 aa40.05■■■■■ 4
C2orf88-204ENST00000409870 ADAMTSL3P82987 1691 aa40.03■■■■■ 4
C2orf88-204ENST00000409870 BCORL1Q5H9F3 1711 aa40■■■■□ 3.99
C2orf88-204ENST00000409870 POGZQ7Z3K3 1410 aa39.97■■■■□ 3.99
C2orf88-204ENST00000409870 ZFYVE16Q7Z3T8 1539 aa39.96■■■■□ 3.99
C2orf88-204ENST00000409870 HECW2Q9P2P5 1572 aa39.96■■■■□ 3.99
C2orf88-204ENST00000409870 SAMD9LQ8IVG5 1584 aa39.95■■■■□ 3.99
C2orf88-204ENST00000409870 CFDP1Q9UEE9 299 aaPredicted RBP39.94■■■■□ 3.98
C2orf88-204ENST00000409870 SCAPERQ9BY12 1400 aa39.94■■■■□ 3.98
C2orf88-204ENST00000409870 ABCC1P33527 1531 aa39.93■■■■□ 3.98
C2orf88-204ENST00000409870 MAGI2Q86UL8 1455 aa39.92■■■■□ 3.98
C2orf88-204ENST00000409870 MYOM3Q5VTT5 1437 aa39.9■■■■□ 3.98
C2orf88-204ENST00000409870 MADDQ8WXG6 1647 aa39.89■■■■□ 3.98
C2orf88-204ENST00000409870 YEATS2Q9ULM3 1422 aa39.88■■■■□ 3.97
C2orf88-204ENST00000409870 ARID4BQ4LE39 1312 aaPredicted RBP39.87■■■■□ 3.97
C2orf88-204ENST00000409870 PTPRMP28827 1452 aa39.85■■■■□ 3.97
C2orf88-204ENST00000409870 ZNF777Q9ULD5 760 aaPredicted RBP39.83■■■■□ 3.97
C2orf88-204ENST00000409870 PLEKHH2Q8IVE3 1493 aa39.83■■■■□ 3.97
C2orf88-204ENST00000409870 SIGLEC1Q9BZZ2 1709 aa39.83■■■■□ 3.97
C2orf88-204ENST00000409870 MIA2Q96PC5 1412 aa39.82■■■■□ 3.97
C2orf88-204ENST00000409870 ARHGEF12Q9NZN5 1544 aa39.82■■■■□ 3.96
C2orf88-204ENST00000409870 SYCP2Q9BX26 1530 aa39.8■■■■□ 3.96
C2orf88-204ENST00000409870 KIAA1107Q9UPP5 1409 aa39.79■■■■□ 3.96
C2orf88-204ENST00000409870 CAMSAP2Q08AD1 1489 aa39.78■■■■□ 3.96
C2orf88-204ENST00000409870 ZNF518AQ6AHZ1 1483 aa39.78■■■■□ 3.96
C2orf88-204ENST00000409870 KDM5CP41229 1560 aa39.76■■■■□ 3.96
C2orf88-204ENST00000409870 RIMS1Q86UR5 1692 aaKnown RBP39.75■■■■□ 3.95
C2orf88-204ENST00000409870 ZNF644Q9H582 1327 aaPredicted RBP39.75■■■■□ 3.95
C2orf88-204ENST00000409870 PPARGC1BQ86YN6 1023 aaKnown RBP39.74■■■■□ 3.95
C2orf88-204ENST00000409870 FGD6Q6ZV73 1430 aa39.72■■■■□ 3.95
C2orf88-204ENST00000409870 TRAPPC8Q9Y2L5 1435 aa39.72■■■■□ 3.95
C2orf88-204ENST00000409870 PTPN23Q9H3S7 1636 aa39.69■■■■□ 3.94
C2orf88-204ENST00000409870 MBD5Q9P267 1494 aa39.68■■■■□ 3.94
C2orf88-204ENST00000409870 C9orf84Q5VXU9 1444 aa39.68■■■■□ 3.94
C2orf88-204ENST00000409870 ATP10AO60312 1499 aa39.67■■■■□ 3.94
C2orf88-204ENST00000409870 HNRNPMP52272 730 aaKnown RBP eCLIP39.65■■■■□ 3.94
C2orf88-204ENST00000409870 AFAP1Q8N556 730 aa39.64■■■■□ 3.94
C2orf88-204ENST00000409870 TCOF1Q13428 1488 aaKnown RBP39.63■■■■□ 3.93
C2orf88-204ENST00000409870 FER1L4A9Z1Z3 1794 aa39.63■■■■□ 3.93
C2orf88-204ENST00000409870 ARHGEF5Q12774 1597 aa39.61■■■■□ 3.93
C2orf88-204ENST00000409870 DIP2CQ9Y2E4 1556 aa39.59■■■■□ 3.93
C2orf88-204ENST00000409870 CCDC141Q6ZP82 1450 aa39.57■■■■□ 3.92
C2orf88-204ENST00000409870 MLH3Q9UHC1 1453 aa39.57■■■■□ 3.92
C2orf88-204ENST00000409870 ABCA6Q8N139 1617 aa39.56■■■■□ 3.92
C2orf88-204ENST00000409870 REREQ9P2R6 1566 aa39.53■■■■□ 3.92
C2orf88-204ENST00000409870 INO80Q9ULG1 1556 aaPredicted RBP39.52■■■■□ 3.92
C2orf88-204ENST00000409870 KIDINS220Q9ULH0 1771 aa39.51■■■■□ 3.91
C2orf88-204ENST00000409870 MLECQ14165 292 aa39.5■■■■□ 3.91
C2orf88-204ENST00000409870 RSPH4AQ5TD94 716 aa39.5■■■■□ 3.91
C2orf88-204ENST00000409870 MYT1LQ9UL68 1186 aa39.48■■■■□ 3.91
C2orf88-204ENST00000409870 ATP7AQ04656 1500 aa39.47■■■■□ 3.91
C2orf88-204ENST00000409870 SPAG9O60271 1321 aaKnown RBP39.47■■■■□ 3.91
C2orf88-204ENST00000409870 DNMT1P26358 1616 aaKnown RBP39.45■■■■□ 3.91
C2orf88-204ENST00000409870 LMTK3Q96Q04 1460 aa39.45■■■■□ 3.91
C2orf88-204ENST00000409870 CROCC2H7BZ55 1655 aa39.43■■■■□ 3.9
C2orf88-204ENST00000409870 RRBP1Q9P2E9 1410 aaKnown RBP39.4■■■■□ 3.9
C2orf88-204ENST00000409870 MAST1Q9Y2H9 1570 aa39.4■■■■□ 3.9
C2orf88-204ENST00000409870 RTEL1-TNFRSF6BF6WH68 1400 aa39.4■■■■□ 3.9
C2orf88-204ENST00000409870 ABCC5O15440 1437 aa39.38■■■■□ 3.89
C2orf88-204ENST00000409870 DAPK1P53355 1430 aa39.38■■■■□ 3.89
C2orf88-204ENST00000409870 FAM50AQ14320 339 aaKnown RBP39.38■■■■□ 3.89
C2orf88-204ENST00000409870 SHANK2Q9UPX8 1470 aa39.37■■■■□ 3.89
C2orf88-204ENST00000409870 AGLP35573 1532 aa39.36■■■■□ 3.89
C2orf88-204ENST00000409870 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.35■■■■□ 3.89
C2orf88-204ENST00000409870 PLPPR3Q6T4P5 718 aa39.35■■■■□ 3.89
C2orf88-204ENST00000409870 TSPY4P0CV99 314 aa39.33■■■■□ 3.89
C2orf88-204ENST00000409870 TSPY10P0CW01 314 aa39.33■■■■□ 3.89
C2orf88-204ENST00000409870 ADGBQ8N7X0 1667 aa39.28■■■■□ 3.88
C2orf88-204ENST00000409870 PLXNC1O60486 1568 aa39.26■■■■□ 3.88
C2orf88-204ENST00000409870 PREX1Q8TCU6 1659 aa39.23■■■■□ 3.87
C2orf88-204ENST00000409870 A2MP01023 1474 aa39.2■■■■□ 3.87
C2orf88-204ENST00000409870 C3P01024 1663 aa39.17■■■■□ 3.86
C2orf88-204ENST00000409870 ADGRL2O95490 1459 aa39.16■■■■□ 3.86
C2orf88-204ENST00000409870 PTPRKQ15262 1439 aa39.15■■■■□ 3.86
C2orf88-204ENST00000409870 CEBPAP49715 358 aaPredicted RBP39.13■■■■□ 3.85
C2orf88-204ENST00000409870 HSPA2P54652 639 aa39.12■■■■□ 3.85
C2orf88-204ENST00000409870 ILDR1Q86SU0 546 aaPredicted RBP39.12■■■■□ 3.85
C2orf88-204ENST00000409870 DHX29Q7Z478 1369 aaKnown RBP39.1■■■■□ 3.85
C2orf88-204ENST00000409870 ANKRD30AQ9BXX3 1397 aa39.09■■■■□ 3.85
C2orf88-204ENST00000409870 CHIC2Q9UKJ5 165 aa39.09■■■■□ 3.85
C2orf88-204ENST00000409870 NCOA1Q15788 1441 aa39.08■■■■□ 3.85
C2orf88-204ENST00000409870 CNTLNQ9NXG0 1405 aa39.08■■■■□ 3.85
C2orf88-204ENST00000409870 KIF15Q9NS87 1388 aa39.07■■■■□ 3.84
C2orf88-204ENST00000409870 ESF1Q9H501 851 aaKnown RBP39.06■■■■□ 3.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms