RNA–Protein interactions for RNA: ENST00000409299.7

PXMP4-203, Transcript of peroxisomal membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PXMP4, Length 5,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXMP4-203ENST00000409299 FANCD2Q9BXW9 1451 aa15.7■□□□□ 0.1
PXMP4-203ENST00000409299 U2SURPO15042 1029 aaKnown RBP15.7■□□□□ 0.1
PXMP4-203ENST00000409299 PKD2Q13563 968 aa15.7■□□□□ 0.1
PXMP4-203ENST00000409299 CFAP44Q96MT7 982 aa15.7■□□□□ 0.1
PXMP4-203ENST00000409299 TMF1P82094 1093 aa15.69■□□□□ 0.1
PXMP4-203ENST00000409299 ZRSR1Q15695 479 aaKnown RBP15.69■□□□□ 0.1
PXMP4-203ENST00000409299 CC2D1BQ5T0F9 858 aaKnown RBP15.69■□□□□ 0.1
PXMP4-203ENST00000409299 HNRNPMP52272 730 aaKnown RBP eCLIP15.68■□□□□ 0.1
PXMP4-203ENST00000409299 PAK3O75914 559 aaPredicted RBP15.67■□□□□ 0.1
PXMP4-203ENST00000409299 SPAG9O60271 1321 aaKnown RBP15.66■□□□□ 0.1
PXMP4-203ENST00000409299 EID1Q9Y6B2 187 aa15.65■□□□□ 0.1
PXMP4-203ENST00000409299 RAPGEF2Q9Y4G8 1499 aa15.65■□□□□ 0.1
PXMP4-203ENST00000409299 WASHC2CQ9Y4E1 1318 aa15.64■□□□□ 0.09
PXMP4-203ENST00000409299 KANK4Q5T7N3 995 aaPredicted RBP15.64■□□□□ 0.09
PXMP4-203ENST00000409299 L1TD1Q5T7N2 865 aaKnown RBP15.64■□□□□ 0.09
PXMP4-203ENST00000409299 ANKRD30AQ9BXX3 1397 aa15.63■□□□□ 0.09
PXMP4-203ENST00000409299 FOXD1Q16676 465 aa15.63■□□□□ 0.09
PXMP4-203ENST00000409299 NUP155O75694 1391 aa15.63■□□□□ 0.09
PXMP4-203ENST00000409299 SMARCA4P51532 1647 aa15.62■□□□□ 0.09
PXMP4-203ENST00000409299 HSP90AB1P08238 724 aaKnown RBP15.62■□□□□ 0.09
PXMP4-203ENST00000409299 FHOD3Q2V2M9 1422 aa15.62■□□□□ 0.09
PXMP4-203ENST00000409299 GOLGA6L6A8MZA4 724 aa15.62■□□□□ 0.09
PXMP4-203ENST00000409299 PTMSP20962 102 aa15.6■□□□□ 0.09
PXMP4-203ENST00000409299 HDGFL2Q7Z4V5 671 aaPredicted RBP15.6■□□□□ 0.09
PXMP4-203ENST00000409299 RGS3P49796 1198 aa15.6■□□□□ 0.09
PXMP4-203ENST00000409299 PTPRGP23470 1445 aa15.6■□□□□ 0.09
PXMP4-203ENST00000409299 CSB-PGBD3P0DP91 1061 aa15.6■□□□□ 0.09
PXMP4-203ENST00000409299 DNTTIP2Q5QJE6 756 aaKnown RBP15.59■□□□□ 0.09
PXMP4-203ENST00000409299 HSCBQ8IWL3 235 aa15.59■□□□□ 0.09
PXMP4-203ENST00000409299 KTN1Q86UP2 1357 aaKnown RBP15.59■□□□□ 0.09
PXMP4-203ENST00000409299 MORC1Q86VD1 984 aa15.59■□□□□ 0.09
PXMP4-203ENST00000409299 NUTM2DQ5VT03 806 aaPredicted RBP15.59■□□□□ 0.09
PXMP4-203ENST00000409299 CCDC9Q9Y3X0 531 aaKnown RBP15.59■□□□□ 0.09
PXMP4-203ENST00000409299 AEBP2Q6ZN18 517 aaPredicted RBP15.58■□□□□ 0.09
PXMP4-203ENST00000409299 FRAT1Q92837 279 aaPredicted RBP15.58■□□□□ 0.08
PXMP4-203ENST00000409299 B4GALNT3Q6L9W6 998 aa15.57■□□□□ 0.08
PXMP4-203ENST00000409299 NAP1L5Q96NT1 182 aaPredicted RBP15.57■□□□□ 0.08
PXMP4-203ENST00000409299 HSPA5P11021 654 aaKnown RBP15.57■□□□□ 0.08
PXMP4-203ENST00000409299 RSPH4AQ5TD94 716 aa15.57■□□□□ 0.08
PXMP4-203ENST00000409299 RALBP1Q15311 655 aa15.56■□□□□ 0.08
PXMP4-203ENST00000409299 CCDC18Q5T9S5 1454 aa15.55■□□□□ 0.08
PXMP4-203ENST00000409299 NRDCO43847 1150 aa15.54■□□□□ 0.08
PXMP4-203ENST00000409299 MPHOSPH9Q99550 1183 aa15.54■□□□□ 0.08
PXMP4-203ENST00000409299 MCCP23508 829 aa15.53■□□□□ 0.08
PXMP4-203ENST00000409299 RBM19Q9Y4C8 960 aaKnown RBP15.53■□□□□ 0.08
PXMP4-203ENST00000409299 FAM69CQ0P6D2 419 aa15.52■□□□□ 0.08
PXMP4-203ENST00000409299 TCERG1O14776 1098 aaKnown RBP15.52■□□□□ 0.08
PXMP4-203ENST00000409299 RTF1Q92541 710 aaKnown RBP15.52■□□□□ 0.07
PXMP4-203ENST00000409299 OS9Q13438 667 aaPredicted RBP15.51■□□□□ 0.07
PXMP4-203ENST00000409299 RAB3GAP2Q9H2M9 1393 aa15.51■□□□□ 0.07
PXMP4-203ENST00000409299 ROCK2O75116 1388 aaKnown RBP15.49■□□□□ 0.07
PXMP4-203ENST00000409299 GOLGA2Q08379 1002 aa15.49■□□□□ 0.07
PXMP4-203ENST00000409299 IPO8O15397 1037 aaKnown RBP15.49■□□□□ 0.07
PXMP4-203ENST00000409299 DEKP35659 375 aaKnown RBP15.48■□□□□ 0.07
PXMP4-203ENST00000409299 NGDNQ8NEJ9 315 aaKnown RBP15.48■□□□□ 0.07
PXMP4-203ENST00000409299 CALD1Q05682 793 aaKnown RBP15.48■□□□□ 0.07
PXMP4-203ENST00000409299 CHAF1AQ13111 956 aaPredicted RBP15.48■□□□□ 0.07
PXMP4-203ENST00000409299 EIF3AQ14152 1382 aaKnown RBP15.47■□□□□ 0.07
PXMP4-203ENST00000409299 GAPVD1Q14C86 1478 aa15.47■□□□□ 0.07
PXMP4-203ENST00000409299 NUTM2FA1L443 756 aa15.47■□□□□ 0.07
PXMP4-203ENST00000409299 MSNP26038 577 aaKnown RBP15.46■□□□□ 0.06
PXMP4-203ENST00000409299 RCAN3Q9UKA8 241 aa15.46■□□□□ 0.06
PXMP4-203ENST00000409299 ZNF330Q9Y3S2 320 aaPredicted RBP15.45■□□□□ 0.06
PXMP4-203ENST00000409299 RAD54L2Q9Y4B4 1467 aa15.44■□□□□ 0.06
PXMP4-203ENST00000409299 GBP4Q96PP9 640 aa15.44■□□□□ 0.06
PXMP4-203ENST00000409299 RWDD1Q9H446 243 aaPredicted RBP15.44■□□□□ 0.06
PXMP4-203ENST00000409299 FGD5Q6ZNL6 1462 aa15.44■□□□□ 0.06
PXMP4-203ENST00000409299 PDE3BQ13370 1112 aa15.43■□□□□ 0.06
PXMP4-203ENST00000409299 KCNJ4P48050 445 aa15.43■□□□□ 0.06
PXMP4-203ENST00000409299 PHLDB1Q86UU1 1377 aa15.43■□□□□ 0.06
PXMP4-203ENST00000409299 GOLGA6L4A6NEF3 574 aa15.43■□□□□ 0.06
PXMP4-203ENST00000409299 FGD1P98174 961 aa15.42■□□□□ 0.06
PXMP4-203ENST00000409299 PMFBP1Q8TBY8 1022 aa15.42■□□□□ 0.06
PXMP4-203ENST00000409299 AQRO60306 1485 aaKnown RBP eCLIP15.41■□□□□ 0.06
PXMP4-203ENST00000409299 TERF2IPQ9NYB0 399 aa15.41■□□□□ 0.06
PXMP4-203ENST00000409299 PLCB2Q00722 1185 aa15.39■□□□□ 0.05
PXMP4-203ENST00000409299 U2AF1L5P0DN76 240 aaPredicted RBP15.39■□□□□ 0.05
PXMP4-203ENST00000409299 U2AF1Q01081 240 aaKnown RBP eCLIP15.39■□□□□ 0.05
PXMP4-203ENST00000409299 CHMP4AQ9BY43 222 aa15.39■□□□□ 0.05
PXMP4-203ENST00000409299 TRAK1Q9UPV9 953 aa15.38■□□□□ 0.05
PXMP4-203ENST00000409299 NCAPD3P42695 1498 aa15.38■□□□□ 0.05
PXMP4-203ENST00000409299 TAOK2Q9UL54 1235 aa15.37■□□□□ 0.05
PXMP4-203ENST00000409299 RTN4Q9NQC3 1192 aaKnown RBP15.37■□□□□ 0.05
PXMP4-203ENST00000409299 AMPHP49418 695 aa15.36■□□□□ 0.05
PXMP4-203ENST00000409299 LTV1Q96GA3 475 aaPredicted RBP15.36■□□□□ 0.05
PXMP4-203ENST00000409299 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.35■□□□□ 0.05
PXMP4-203ENST00000409299 IPO9Q96P70 1041 aaKnown RBP15.35■□□□□ 0.05
PXMP4-203ENST00000409299 TULP1O00294 542 aaPredicted RBP15.34■□□□□ 0.05
PXMP4-203ENST00000409299 SYAP1Q96A49 352 aaPredicted RBP15.34■□□□□ 0.05
PXMP4-203ENST00000409299 TPRNQ4KMQ1 711 aa15.34■□□□□ 0.05
PXMP4-203ENST00000409299 TSHZ2Q9NRE2 1034 aa15.34■□□□□ 0.05
PXMP4-203ENST00000409299 HTATSF1O43719 755 aaKnown RBP15.33■□□□□ 0.05
PXMP4-203ENST00000409299 KIF15Q9NS87 1388 aa15.33■□□□□ 0.05
PXMP4-203ENST00000409299 TMX4Q9H1E5 349 aaPredicted RBP15.33■□□□□ 0.04
PXMP4-203ENST00000409299 VGFO15240 615 aaPredicted RBP15.33■□□□□ 0.04
PXMP4-203ENST00000409299 NLRP13Q86W25 1043 aa15.32■□□□□ 0.04
PXMP4-203ENST00000409299 RUSC2Q8N2Y8 1516 aa15.32■□□□□ 0.04
PXMP4-203ENST00000409299 KIAA1211Q6ZU35 1233 aa15.31■□□□□ 0.04
PXMP4-203ENST00000409299 L3MBTL2Q969R5 705 aa15.31■□□□□ 0.04
PXMP4-203ENST00000409299 IGF1RP08069 1367 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms