RNA–Protein interactions for RNA: ENST00000409295.5

COPS7B-205, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best) BASIC

Gene COPS7B, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-205ENST00000409295 MYO5CQ9NQX4 1742 aa22.57■■□□□ 1.2
COPS7B-205ENST00000409295 CFDP1Q9UEE9 299 aaPredicted RBP22.57■■□□□ 1.2
COPS7B-205ENST00000409295 ZNF777Q9ULD5 760 aaPredicted RBP22.57■■□□□ 1.2
COPS7B-205ENST00000409295 MYT1LQ9UL68 1186 aa22.54■■□□□ 1.2
COPS7B-205ENST00000409295 EHBP1L1Q8N3D4 1523 aa22.52■■□□□ 1.2
COPS7B-205ENST00000409295 GPATCH8Q9UKJ3 1502 aaKnown RBP22.51■■□□□ 1.19
COPS7B-205ENST00000409295 TIAM1Q13009 1591 aa22.5■■□□□ 1.19
COPS7B-205ENST00000409295 MAP3K1Q13233 1512 aa22.49■■□□□ 1.19
COPS7B-205ENST00000409295 AFAP1Q8N556 730 aa22.49■■□□□ 1.19
COPS7B-205ENST00000409295 KANK4Q5T7N3 995 aaPredicted RBP22.47■■□□□ 1.19
COPS7B-205ENST00000409295 ARID4BQ4LE39 1312 aaPredicted RBP22.47■■□□□ 1.19
COPS7B-205ENST00000409295 POGZQ7Z3K3 1410 aa22.47■■□□□ 1.19
COPS7B-205ENST00000409295 KDM4FA0A1W2PPD8 638 aa22.46■■□□□ 1.19
COPS7B-205ENST00000409295 LRRC9Q6ZRR7 1453 aa22.46■■□□□ 1.19
COPS7B-205ENST00000409295 PREX2Q70Z35 1606 aa22.46■■□□□ 1.19
COPS7B-205ENST00000409295 MAGI2Q86UL8 1455 aa22.45■■□□□ 1.18
COPS7B-205ENST00000409295 CDC42BPBQ9Y5S2 1711 aa22.45■■□□□ 1.18
COPS7B-205ENST00000409295 HNRNPMP52272 730 aaKnown RBP eCLIP22.44■■□□□ 1.184e-7■■■■□ 19.8
COPS7B-205ENST00000409295 ZNF518AQ6AHZ1 1483 aa22.43■■□□□ 1.18
COPS7B-205ENST00000409295 FRMPD1Q5SYB0 1578 aa22.42■■□□□ 1.18
COPS7B-205ENST00000409295 NCOA2Q15596 1464 aa22.42■■□□□ 1.18
COPS7B-205ENST00000409295 CDC42BPAQ5VT25 1732 aa22.42■■□□□ 1.18
COPS7B-205ENST00000409295 PLEKHH2Q8IVE3 1493 aa22.41■■□□□ 1.18
COPS7B-205ENST00000409295 RICTORQ6R327 1708 aa22.41■■□□□ 1.18
COPS7B-205ENST00000409295 SUPT6HQ7KZ85 1726 aaKnown RBP22.4■■□□□ 1.18
COPS7B-205ENST00000409295 KIAA1107Q9UPP5 1409 aa22.39■■□□□ 1.17
COPS7B-205ENST00000409295 ZMYM4Q5VZL5 1548 aa22.38■■□□□ 1.17
COPS7B-205ENST00000409295 ZFYVE16Q7Z3T8 1539 aa22.37■■□□□ 1.17
COPS7B-205ENST00000409295 ZNF644Q9H582 1327 aaPredicted RBP22.37■■□□□ 1.17
COPS7B-205ENST00000409295 TRAPPC8Q9Y2L5 1435 aa22.37■■□□□ 1.17
COPS7B-205ENST00000409295 RSPH4AQ5TD94 716 aa22.36■■□□□ 1.17
COPS7B-205ENST00000409295 ABCC1P33527 1531 aa22.36■■□□□ 1.17
COPS7B-205ENST00000409295 ARHGEF12Q9NZN5 1544 aa22.36■■□□□ 1.17
COPS7B-205ENST00000409295 SPAG9O60271 1321 aaKnown RBP22.35■■□□□ 1.17
COPS7B-205ENST00000409295 YEATS2Q9ULM3 1422 aa22.35■■□□□ 1.17
COPS7B-205ENST00000409295 ATP10AO60312 1499 aa22.33■■□□□ 1.16
COPS7B-205ENST00000409295 ITSN2Q9NZM3 1697 aa22.33■■□□□ 1.16
COPS7B-205ENST00000409295 ARHGEF40Q8TER5 1519 aa22.32■■□□□ 1.16
COPS7B-205ENST00000409295 SAMD9LQ8IVG5 1584 aa22.32■■□□□ 1.16
COPS7B-205ENST00000409295 MLH3Q9UHC1 1453 aa22.31■■□□□ 1.16
COPS7B-205ENST00000409295 SYCP2Q9BX26 1530 aa22.3■■□□□ 1.16
COPS7B-205ENST00000409295 KDM5CP41229 1560 aa22.29■■□□□ 1.16
COPS7B-205ENST00000409295 TSPY4P0CV99 314 aa22.28■■□□□ 1.16
COPS7B-205ENST00000409295 TSPY10P0CW01 314 aa22.28■■□□□ 1.16
COPS7B-205ENST00000409295 MLECQ14165 292 aa22.28■■□□□ 1.16
COPS7B-205ENST00000409295 C9orf84Q5VXU9 1444 aa22.28■■□□□ 1.16
COPS7B-205ENST00000409295 MYOM3Q5VTT5 1437 aa22.26■■□□□ 1.15
COPS7B-205ENST00000409295 MIA2Q96PC5 1412 aa22.26■■□□□ 1.15
COPS7B-205ENST00000409295 HECW2Q9P2P5 1572 aa22.25■■□□□ 1.15
COPS7B-205ENST00000409295 MBD5Q9P267 1494 aa22.23■■□□□ 1.15
COPS7B-205ENST00000409295 CAMSAP2Q08AD1 1489 aa22.22■■□□□ 1.15
COPS7B-205ENST00000409295 ESF1Q9H501 851 aaKnown RBP22.19■■□□□ 1.14
COPS7B-205ENST00000409295 CCDC141Q6ZP82 1450 aa22.18■■□□□ 1.14
COPS7B-205ENST00000409295 RTEL1-TNFRSF6BF6WH68 1400 aa22.18■■□□□ 1.14
COPS7B-205ENST00000409295 DIP2CQ9Y2E4 1556 aa22.16■■□□□ 1.14
COPS7B-205ENST00000409295 ATP7AQ04656 1500 aa22.16■■□□□ 1.14
COPS7B-205ENST00000409295 BCORL1Q5H9F3 1711 aa22.15■■□□□ 1.14
COPS7B-205ENST00000409295 KIDINS220Q9ULH0 1771 aa22.15■■□□□ 1.14
COPS7B-205ENST00000409295 PPARGC1BQ86YN6 1023 aaKnown RBP22.14■■□□□ 1.13
COPS7B-205ENST00000409295 FGD6Q6ZV73 1430 aa22.13■■□□□ 1.13
COPS7B-205ENST00000409295 ABCA6Q8N139 1617 aa22.13■■□□□ 1.13
COPS7B-205ENST00000409295 REREQ9P2R6 1566 aa22.12■■□□□ 1.13
COPS7B-205ENST00000409295 ADAMTSL3P82987 1691 aa22.12■■□□□ 1.13
COPS7B-205ENST00000409295 FAM50AQ14320 339 aaKnown RBP22.12■■□□□ 1.13
COPS7B-205ENST00000409295 A2MP01023 1474 aa22.11■■□□□ 1.13
COPS7B-205ENST00000409295 PLPPR3Q6T4P5 718 aa22.11■■□□□ 1.13
COPS7B-205ENST00000409295 ARHGEF5Q12774 1597 aa22.11■■□□□ 1.13
COPS7B-205ENST00000409295 PTPRMP28827 1452 aa22.1■■□□□ 1.13
COPS7B-205ENST00000409295 AGLP35573 1532 aa22.1■■□□□ 1.13
COPS7B-205ENST00000409295 DHX29Q7Z478 1369 aaKnown RBP22.09■■□□□ 1.13
COPS7B-205ENST00000409295 INO80Q9ULG1 1556 aaPredicted RBP22.08■■□□□ 1.13
COPS7B-205ENST00000409295 GGT6Q6P531 493 aa22.08■■□□□ 1.13
COPS7B-205ENST00000409295 PTPN23Q9H3S7 1636 aa22.06■■□□□ 1.12
COPS7B-205ENST00000409295 MADDQ8WXG6 1647 aa22.06■■□□□ 1.12
COPS7B-205ENST00000409295 KIF3BO15066 747 aa22.05■■□□□ 1.12
COPS7B-205ENST00000409295 PPP6R1Q9UPN7 881 aa22.05■■□□□ 1.12
COPS7B-205ENST00000409295 SIGLEC1Q9BZZ2 1709 aa22.05■■□□□ 1.12
COPS7B-205ENST00000409295 TCOF1Q13428 1488 aaKnown RBP22.03■■□□□ 1.12
COPS7B-205ENST00000409295 ABCC5O15440 1437 aa22.02■■□□□ 1.12
COPS7B-205ENST00000409295 CHIC2Q9UKJ5 165 aa22.01■■□□□ 1.11
COPS7B-205ENST00000409295 RRP7BPQ9NSQ0 103 aa22■■□□□ 1.11
COPS7B-205ENST00000409295 RIMS1Q86UR5 1692 aaKnown RBP22■■□□□ 1.11
COPS7B-205ENST00000409295 ADGBQ8N7X0 1667 aa22■■□□□ 1.11
COPS7B-205ENST00000409295 DAPK1P53355 1430 aa21.99■■□□□ 1.11
COPS7B-205ENST00000409295 CNTLNQ9NXG0 1405 aa21.99■■□□□ 1.11
COPS7B-205ENST00000409295 CEBPAP49715 358 aaPredicted RBP21.99■■□□□ 1.11
COPS7B-205ENST00000409295 MAST1Q9Y2H9 1570 aa21.97■■□□□ 1.11
COPS7B-205ENST00000409295 ANKRD30AQ9BXX3 1397 aa21.97■■□□□ 1.11
COPS7B-205ENST00000409295 FER1L4A9Z1Z3 1794 aa21.96■■□□□ 1.11
COPS7B-205ENST00000409295 PLXNC1O60486 1568 aa21.95■■□□□ 1.11
COPS7B-205ENST00000409295 SHANK2Q9UPX8 1470 aa21.95■■□□□ 1.1
COPS7B-205ENST00000409295 KIF15Q9NS87 1388 aa21.93■■□□□ 1.1
COPS7B-205ENST00000409295 WASHC2CQ9Y4E1 1318 aa21.93■■□□□ 1.1
COPS7B-205ENST00000409295 ZMYM3Q14202 1370 aa21.92■■□□□ 1.1
COPS7B-205ENST00000409295 DNMT1P26358 1616 aaKnown RBP21.91■■□□□ 1.1
COPS7B-205ENST00000409295 ITGAEP38570 1179 aa21.91■■□□□ 1.1
COPS7B-205ENST00000409295 DUOX2Q9NRD8 1548 aa21.89■■□□□ 1.09
COPS7B-205ENST00000409295 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.88■■□□□ 1.09
COPS7B-205ENST00000409295 NCOA1Q15788 1441 aa21.87■■□□□ 1.09
COPS7B-205ENST00000409295 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.85■■□□□ 1.096e-8■■□□□ 11.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms