RNA–Protein interactions for RNA: ENST00000409198.5

NEB-204, Transcript of nebulin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene NEB, Length 20,637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-204ENST00000409198 TONSLQ96HA7 1378 aa4.31□□□□□ -1.72
NEB-204ENST00000409198 CCAR1Q8IX12 1150 aaKnown RBP4.31□□□□□ -1.72
NEB-204ENST00000409198 RASSF8Q8NHQ8 419 aa4.31□□□□□ -1.72
NEB-204ENST00000409198 FTSJ3Q8IY81 847 aaKnown RBP4.31□□□□□ -1.72
NEB-204ENST00000409198 RTF1Q92541 710 aaKnown RBP4.31□□□□□ -1.72
NEB-204ENST00000409198 IRX6P78412 446 aaPredicted RBP4.31□□□□□ -1.72
NEB-204ENST00000409198 ZNF330Q9Y3S2 320 aaPredicted RBP4.31□□□□□ -1.72
NEB-204ENST00000409198 AMOTL1Q8IY63 956 aa4.31□□□□□ -1.72
NEB-204ENST00000409198 DEKP35659 375 aaKnown RBP4.3□□□□□ -1.72
NEB-204ENST00000409198 HDAC5Q9UQL6 1122 aa4.3□□□□□ -1.72
NEB-204ENST00000409198 HTATSF1O43719 755 aaKnown RBP4.3□□□□□ -1.72
NEB-204ENST00000409198 DRC7Q8IY82 874 aa4.3□□□□□ -1.72
NEB-204ENST00000409198 FAM9BQ8IZU0 186 aa4.3□□□□□ -1.72
NEB-204ENST00000409198 GOLGA6L1Q8N7Z2 621 aa4.3□□□□□ -1.72
NEB-204ENST00000409198 WASHC2AQ641Q2 1341 aa4.3□□□□□ -1.72
NEB-204ENST00000409198 RRP12Q5JTH9 1297 aaKnown RBP4.29□□□□□ -1.72
NEB-204ENST00000409198 KIAA1211Q6ZU35 1233 aa4.29□□□□□ -1.72
NEB-204ENST00000409198 PPP1R1BQ9UD71 204 aaPredicted RBP4.29□□□□□ -1.72
NEB-204ENST00000409198 PAK3O75914 559 aaPredicted RBP4.29□□□□□ -1.72
NEB-204ENST00000409198 PPM1FP49593 454 aaPredicted RBP4.29□□□□□ -1.72
NEB-204ENST00000409198 ZNF710Q8N1W2 664 aa4.29□□□□□ -1.72
NEB-204ENST00000409198 CCDC43Q96MW1 224 aaKnown RBP4.29□□□□□ -1.72
NEB-204ENST00000409198 PODXL2Q9NZ53 605 aa4.29□□□□□ -1.72
NEB-204ENST00000409198 EVA1CP58658 441 aa4.29□□□□□ -1.72
NEB-204ENST00000409198 MYO15BQ96JP2 1530 aa4.28□□□□□ -1.72
NEB-204ENST00000409198 VSIG10Q8N0Z9 540 aa4.28□□□□□ -1.72
NEB-204ENST00000409198 CHMP3Q9Y3E7 222 aa4.28□□□□□ -1.72
NEB-204ENST00000409198 MLECQ14165 292 aa4.28□□□□□ -1.72
NEB-204ENST00000409198 TPM2P07951 284 aa4.28□□□□□ -1.72
NEB-204ENST00000409198 WDHD1O75717 1129 aaPredicted RBP4.27□□□□□ -1.73
NEB-204ENST00000409198 PLEKHD1A6NEE1 506 aa4.27□□□□□ -1.73
NEB-204ENST00000409198 HSP90AB1P08238 724 aaKnown RBP4.27□□□□□ -1.73
NEB-204ENST00000409198 CALRP27797 417 aaKnown RBP4.27□□□□□ -1.73
NEB-204ENST00000409198 GPATCH3Q96I76 525 aa4.27□□□□□ -1.73
NEB-204ENST00000409198 HNRNPUQ00839 825 aaKnown RBP eCLIP4.27□□□□□ -1.73
NEB-204ENST00000409198 TPM3P06753 285 aa4.27□□□□□ -1.73
NEB-204ENST00000409198 KNSTRNQ9Y448 316 aa4.27□□□□□ -1.73
NEB-204ENST00000409198 TMEM87AQ8NBN3 555 aa4.27□□□□□ -1.73
NEB-204ENST00000409198 CCDC47Q96A33 483 aaKnown RBP4.26□□□□□ -1.73
NEB-204ENST00000409198 ODF2Q5BJF6 829 aa4.26□□□□□ -1.73
NEB-204ENST00000409198 FBXW7Q969H0 707 aa4.26□□□□□ -1.73
NEB-204ENST00000409198 NAP1L5Q96NT1 182 aaPredicted RBP4.26□□□□□ -1.73
NEB-204ENST00000409198 SCRIBQ14160 1630 aa4.26□□□□□ -1.73
NEB-204ENST00000409198 CHMP4CQ96CF2 233 aa4.26□□□□□ -1.73
NEB-204ENST00000409198 CCDC97Q96F63 343 aaPredicted RBP4.26□□□□□ -1.73
NEB-204ENST00000409198 TSR1Q2NL82 804 aaKnown RBP4.26□□□□□ -1.73
NEB-204ENST00000409198 EID1Q9Y6B2 187 aa4.26□□□□□ -1.73
NEB-204ENST00000409198 AKAP17AQ02040 695 aaKnown RBP4.25□□□□□ -1.73
NEB-204ENST00000409198 CREBRFQ8IUR6 639 aa4.25□□□□□ -1.73
NEB-204ENST00000409198 RAD21O60216 631 aa4.25□□□□□ -1.73
NEB-204ENST00000409198 CHIC2Q9UKJ5 165 aa4.25□□□□□ -1.73
NEB-204ENST00000409198 C16orf71Q8IYS4 520 aaPredicted RBP4.25□□□□□ -1.73
NEB-204ENST00000409198 KANK1Q14678 1352 aa4.25□□□□□ -1.73
NEB-204ENST00000409198 TSHZ2Q9NRE2 1034 aa4.25□□□□□ -1.73
NEB-204ENST00000409198 RDXP35241 583 aaKnown RBP4.25□□□□□ -1.73
NEB-204ENST00000409198 SEPT11Q9NVA2 429 aaKnown RBP4.25□□□□□ -1.73
NEB-204ENST00000409198 SOX12O15370 315 aa4.25□□□□□ -1.73
NEB-204ENST00000409198 TIMELESSQ9UNS1 1208 aa4.25□□□□□ -1.73
NEB-204ENST00000409198 SPDYE4A6NLX3 237 aa4.25□□□□□ -1.73
NEB-204ENST00000409198 U2SURPO15042 1029 aaKnown RBP4.24□□□□□ -1.73
NEB-204ENST00000409198 TOMM22Q9NS69 142 aa4.24□□□□□ -1.73
NEB-204ENST00000409198 TPD52L1Q16890 204 aaPredicted RBP4.24□□□□□ -1.73
NEB-204ENST00000409198 TMEM132AQ24JP5 1023 aa4.24□□□□□ -1.73
NEB-204ENST00000409198 HSP90B1P14625 803 aaKnown RBP4.24□□□□□ -1.73
NEB-204ENST00000409198 SETQ01105 290 aaPredicted RBP4.24□□□□□ -1.73
NEB-204ENST00000409198 SMC4Q9NTJ3 1288 aa4.24□□□□□ -1.73
NEB-204ENST00000409198 SYNE3Q6ZMZ3 975 aa4.24□□□□□ -1.73
NEB-204ENST00000409198 HMGB2P26583 209 aaKnown RBP4.23□□□□□ -1.73
NEB-204ENST00000409198 CCDC70Q6NSX1 233 aa4.23□□□□□ -1.73
NEB-204ENST00000409198 WDR70Q9NW82 654 aa4.23□□□□□ -1.73
NEB-204ENST00000409198 HDGFL2Q7Z4V5 671 aaPredicted RBP4.23□□□□□ -1.73
NEB-204ENST00000409198 RBM33Q96EV2 1170 aaKnown RBP4.23□□□□□ -1.73
NEB-204ENST00000409198 CT47A1Q5JQC4 288 aaPredicted RBP4.23□□□□□ -1.73
NEB-204ENST00000409198 TPM1P09493 284 aa4.22□□□□□ -1.73
NEB-204ENST00000409198 CALD1Q05682 793 aaKnown RBP4.22□□□□□ -1.73
NEB-204ENST00000409198 AK7Q96M32 723 aa4.22□□□□□ -1.73
NEB-204ENST00000409198 PRDM2Q13029 1718 aa4.22□□□□□ -1.73
NEB-204ENST00000409198 MRS2Q9HD23 443 aa4.22□□□□□ -1.73
NEB-204ENST00000409198 LRRFIP1Q32MZ4 808 aaKnown RBP4.22□□□□□ -1.73
NEB-204ENST00000409198 SENP3-EIF4A1A0A087X0R7 540 aa4.22□□□□□ -1.73
NEB-204ENST00000409198 CSPP1Q1MSJ5 1256 aa4.22□□□□□ -1.73
NEB-204ENST00000409198 DHX16O60231 1041 aaKnown RBP4.22□□□□□ -1.73
NEB-204ENST00000409198 TNNT3P45378 269 aaPredicted RBP4.22□□□□□ -1.73
NEB-204ENST00000409198 HMMRO75330 724 aa4.21□□□□□ -1.74
NEB-204ENST00000409198 TRIM21P19474 475 aaKnown RBP4.21□□□□□ -1.74
NEB-204ENST00000409198 KIF3AQ9Y496 699 aa4.21□□□□□ -1.74
NEB-204ENST00000409198 DNAI2Q9GZS0 605 aa4.21□□□□□ -1.74
NEB-204ENST00000409198 SPAG9O60271 1321 aaKnown RBP4.21□□□□□ -1.74
NEB-204ENST00000409198 PES1O00541 588 aaKnown RBP4.21□□□□□ -1.74
NEB-204ENST00000409198 MSNP26038 577 aaKnown RBP4.21□□□□□ -1.74
NEB-204ENST00000409198 SUPT16HQ9Y5B9 1047 aaKnown RBP4.21□□□□□ -1.74
NEB-204ENST00000409198 RGL3Q3MIN7 710 aa4.21□□□□□ -1.74
NEB-204ENST00000409198 HSCBQ8IWL3 235 aa4.21□□□□□ -1.74
NEB-204ENST00000409198 STK31Q9BXU1 1019 aa4.21□□□□□ -1.74
NEB-204ENST00000409198 CDR1P51861 262 aa4.2□□□□□ -1.74
NEB-204ENST00000409198 PCMTD1Q96MG8 357 aaPredicted RBP4.2□□□□□ -1.74
NEB-204ENST00000409198 SF3A1Q15459 793 aaKnown RBP4.2□□□□□ -1.74
NEB-204ENST00000409198 PAXIP1Q6ZW49 1069 aaPredicted RBP4.2□□□□□ -1.74
NEB-204ENST00000409198 PKNOX2Q96KN3 472 aa4.2□□□□□ -1.74
NEB-204ENST00000409198 PTMSP20962 102 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms