RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 ZBTB47Q9UFB7 747 aaPredicted RBP6.34□□□□□ -1.4
PCDH11X-207ENST00000406881 UACAQ9BZF9 1416 aa6.33□□□□□ -1.4
PCDH11X-207ENST00000406881 SNAPC4Q5SXM2 1469 aa6.33□□□□□ -1.4
PCDH11X-207ENST00000406881 OSCARQ8IYS5 282 aa6.33□□□□□ -1.4
PCDH11X-207ENST00000406881 URB2Q14146 1524 aaKnown RBP6.33□□□□□ -1.4
PCDH11X-207ENST00000406881 HECW1Q76N89 1606 aa6.33□□□□□ -1.4
PCDH11X-207ENST00000406881 L3MBTL2Q969R5 705 aa6.32□□□□□ -1.4
PCDH11X-207ENST00000406881 SYNJ2O15056 1496 aa6.32□□□□□ -1.4
PCDH11X-207ENST00000406881 HDGFP51858 240 aaKnown RBP6.32□□□□□ -1.4
PCDH11X-207ENST00000406881 CFAP53Q96M91 514 aa6.32□□□□□ -1.4
PCDH11X-207ENST00000406881 SCAF1Q9H7N4 1312 aaKnown RBP6.31□□□□□ -1.4
PCDH11X-207ENST00000406881 MAGI1Q96QZ7 1491 aaPredicted RBP6.31□□□□□ -1.4
PCDH11X-207ENST00000406881 IQGAP2Q13576 1575 aa6.31□□□□□ -1.4
PCDH11X-207ENST00000406881 TROQ12816 1431 aaPredicted RBP6.31□□□□□ -1.4
PCDH11X-207ENST00000406881 FOXD1Q16676 465 aa6.31□□□□□ -1.4
PCDH11X-207ENST00000406881 PRG4Q92954 1404 aaPredicted RBP6.3□□□□□ -1.4
PCDH11X-207ENST00000406881 ROCK2O75116 1388 aaKnown RBP6.3□□□□□ -1.4
PCDH11X-207ENST00000406881 ARID4BQ4LE39 1312 aaPredicted RBP6.3□□□□□ -1.4
PCDH11X-207ENST00000406881 RTL5Q5HYW3 569 aaPredicted RBP6.3□□□□□ -1.4
PCDH11X-207ENST00000406881 AEBP2Q6ZN18 517 aaPredicted RBP6.3□□□□□ -1.4
PCDH11X-207ENST00000406881 PRDM2Q13029 1718 aa6.3□□□□□ -1.4
PCDH11X-207ENST00000406881 KIF3BO15066 747 aa6.29□□□□□ -1.4
PCDH11X-207ENST00000406881 STAC3Q96MF2 364 aa6.29□□□□□ -1.4
PCDH11X-207ENST00000406881 PLEKHH2Q8IVE3 1493 aa6.29□□□□□ -1.4
PCDH11X-207ENST00000406881 GGT6Q6P531 493 aa6.28□□□□□ -1.4
PCDH11X-207ENST00000406881 CCDC136Q96JN2 1154 aa6.28□□□□□ -1.4
PCDH11X-207ENST00000406881 EIF3AQ14152 1382 aaKnown RBP6.28□□□□□ -1.4
PCDH11X-207ENST00000406881 CCDC144AA2RUR9 1427 aa6.28□□□□□ -1.4
PCDH11X-207ENST00000406881 HFM1A2PYH4 1435 aa6.28□□□□□ -1.4
PCDH11X-207ENST00000406881 RALBP1Q15311 655 aa6.28□□□□□ -1.4
PCDH11X-207ENST00000406881 POGKQ9P215 609 aa6.28□□□□□ -1.4
PCDH11X-207ENST00000406881 GRIN2AQ12879 1464 aa6.28□□□□□ -1.4
PCDH11X-207ENST00000406881 ANP32AP39687 249 aaKnown RBP6.28□□□□□ -1.4
PCDH11X-207ENST00000406881 KIF15Q9NS87 1388 aa6.28□□□□□ -1.4
PCDH11X-207ENST00000406881 SUPT6HQ7KZ85 1726 aaKnown RBP6.28□□□□□ -1.4
PCDH11X-207ENST00000406881 EPRSP07814 1512 aaKnown RBP6.27□□□□□ -1.41
PCDH11X-207ENST00000406881 SALL2Q9Y467 1007 aaPredicted RBP6.27□□□□□ -1.41
PCDH11X-207ENST00000406881 ANKRD50Q9ULJ7 1429 aa6.27□□□□□ -1.41
PCDH11X-207ENST00000406881 KTN1Q86UP2 1357 aaKnown RBP6.26□□□□□ -1.41
PCDH11X-207ENST00000406881 NUDCQ9Y266 331 aa6.26□□□□□ -1.41
PCDH11X-207ENST00000406881 PCF11O94913 1555 aaKnown RBP6.26□□□□□ -1.41
PCDH11X-207ENST00000406881 DNAJC5BQ9UF47 199 aa6.26□□□□□ -1.41
PCDH11X-207ENST00000406881 ZNF644Q9H582 1327 aaPredicted RBP6.26□□□□□ -1.41
PCDH11X-207ENST00000406881 ROCK1Q13464 1354 aa6.26□□□□□ -1.41
PCDH11X-207ENST00000406881 PLPPR3Q6T4P5 718 aa6.25□□□□□ -1.41
PCDH11X-207ENST00000406881 THOC2Q8NI27 1593 aaKnown RBP6.25□□□□□ -1.41
PCDH11X-207ENST00000406881 PNNQ9H307 717 aaKnown RBP6.25□□□□□ -1.41
PCDH11X-207ENST00000406881 WASHC2CQ9Y4E1 1318 aa6.24□□□□□ -1.41
PCDH11X-207ENST00000406881 ERICH6BQ5W0A0 696 aa6.24□□□□□ -1.41
PCDH11X-207ENST00000406881 DNAJC5Q9H3Z4 198 aa6.24□□□□□ -1.41
PCDH11X-207ENST00000406881 ARHGAP5Q13017 1502 aa6.23□□□□□ -1.41
PCDH11X-207ENST00000406881 DAPK1P53355 1430 aa6.23□□□□□ -1.41
PCDH11X-207ENST00000406881 CC2D1BQ5T0F9 858 aaKnown RBP6.23□□□□□ -1.41
PCDH11X-207ENST00000406881 PPP4R2Q9NY27 417 aa6.23□□□□□ -1.41
PCDH11X-207ENST00000406881 SUPT16HQ9Y5B9 1047 aaKnown RBP6.23□□□□□ -1.41
PCDH11X-207ENST00000406881 C9orf84Q5VXU9 1444 aa6.22□□□□□ -1.41
PCDH11X-207ENST00000406881 UPF2Q9HAU5 1272 aaKnown RBP6.22□□□□□ -1.41
PCDH11X-207ENST00000406881 USP47Q96K76 1375 aa6.22□□□□□ -1.41
PCDH11X-207ENST00000406881 ZNF608Q9ULD9 1512 aaPredicted RBP6.22□□□□□ -1.41
PCDH11X-207ENST00000406881 MAPK8IP3Q9UPT6 1336 aa6.22□□□□□ -1.41
PCDH11X-207ENST00000406881 MORC1Q86VD1 984 aa6.21□□□□□ -1.41
PCDH11X-207ENST00000406881 NAIPQ13075 1403 aa6.21□□□□□ -1.41
PCDH11X-207ENST00000406881 CDK13Q14004 1512 aaKnown RBP6.21□□□□□ -1.41
PCDH11X-207ENST00000406881 NLRP13Q86W25 1043 aa6.21□□□□□ -1.42
PCDH11X-207ENST00000406881 KIAA1107Q9UPP5 1409 aa6.21□□□□□ -1.42
PCDH11X-207ENST00000406881 MLECQ14165 292 aa6.21□□□□□ -1.42
PCDH11X-207ENST00000406881 HDGFL2Q7Z4V5 671 aaPredicted RBP6.21□□□□□ -1.42
PCDH11X-207ENST00000406881 VGFO15240 615 aaPredicted RBP6.21□□□□□ -1.42
PCDH11X-207ENST00000406881 MS4A1P11836 297 aa6.21□□□□□ -1.42
PCDH11X-207ENST00000406881 SRPK2P78362 688 aaKnown RBP6.21□□□□□ -1.42
PCDH11X-207ENST00000406881 BCL11AQ9H165 835 aa6.2□□□□□ -1.42
PCDH11X-207ENST00000406881 AKNAQ7Z591 1439 aa6.2□□□□□ -1.42
PCDH11X-207ENST00000406881 ST20-MTHFSA0A0A6YYL1 179 aa6.2□□□□□ -1.42
PCDH11X-207ENST00000406881 PDE3BQ13370 1112 aa6.19□□□□□ -1.42
PCDH11X-207ENST00000406881 CYB5RLQ6IPT4 315 aa6.19□□□□□ -1.42
PCDH11X-207ENST00000406881 UGGT2Q9NYU1 1516 aa6.19□□□□□ -1.42
PCDH11X-207ENST00000406881 PTPN23Q9H3S7 1636 aa6.19□□□□□ -1.42
PCDH11X-207ENST00000406881 IRX6P78412 446 aaPredicted RBP6.19□□□□□ -1.42
PCDH11X-207ENST00000406881 C14orf37Q86TY3 774 aa6.19□□□□□ -1.42
PCDH11X-207ENST00000406881 CHMP4BQ9H444 224 aaKnown RBP6.19□□□□□ -1.42
PCDH11X-207ENST00000406881 WDR97A6NE52 1622 aa6.19□□□□□ -1.42
PCDH11X-207ENST00000406881 TRHP20396 242 aaPredicted RBP6.19□□□□□ -1.42
PCDH11X-207ENST00000406881 PRKRIP1Q9H875 184 aaPredicted RBP6.18□□□□□ -1.42
PCDH11X-207ENST00000406881 ADAMTS12P58397 1594 aa6.18□□□□□ -1.42
PCDH11X-207ENST00000406881 MYBBP1AQ9BQG0 1328 aaKnown RBP6.18□□□□□ -1.42
PCDH11X-207ENST00000406881 PLB1Q6P1J6 1458 aa6.18□□□□□ -1.42
PCDH11X-207ENST00000406881 CCDC7Q96M83 1385 aa6.18□□□□□ -1.42
PCDH11X-207ENST00000406881 MYH16Q9H6N6 1097 aa6.18□□□□□ -1.42
PCDH11X-207ENST00000406881 TERF2IPQ9NYB0 399 aa6.18□□□□□ -1.42
PCDH11X-207ENST00000406881 CCDC141Q6ZP82 1450 aa6.18□□□□□ -1.42
PCDH11X-207ENST00000406881 CTTNBP2Q8WZ74 1663 aa6.18□□□□□ -1.42
PCDH11X-207ENST00000406881 KIF14Q15058 1648 aa6.18□□□□□ -1.42
PCDH11X-207ENST00000406881 ABCC5O15440 1437 aa6.17□□□□□ -1.42
PCDH11X-207ENST00000406881 WDR62O43379 1518 aa6.17□□□□□ -1.42
PCDH11X-207ENST00000406881 CAMSAP2Q08AD1 1489 aa6.17□□□□□ -1.42
PCDH11X-207ENST00000406881 EIF5BO60841 1220 aaKnown RBP6.17□□□□□ -1.42
PCDH11X-207ENST00000406881 SENP3Q9H4L4 574 aaPredicted RBP6.17□□□□□ -1.42
PCDH11X-207ENST00000406881 HAP1P54257 671 aaPredicted RBP6.17□□□□□ -1.42
PCDH11X-207ENST00000406881 STK26Q9P289 416 aa6.17□□□□□ -1.42
PCDH11X-207ENST00000406881 NPM2Q86SE8 214 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms