RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-222ENST00000406454 WIZO95785 1651 aa17.18■□□□□ 0.34
CACNA1C-222ENST00000406454 KTN1Q86UP2 1357 aaKnown RBP17.17■□□□□ 0.34
CACNA1C-222ENST00000406454 FHOD3Q2V2M9 1422 aa17.16■□□□□ 0.34
CACNA1C-222ENST00000406454 SAFB2Q14151 953 aaKnown RBP eCLIP17.15■□□□□ 0.34
CACNA1C-222ENST00000406454 ROCK2O75116 1388 aaKnown RBP17.13■□□□□ 0.33
CACNA1C-222ENST00000406454 TRIM44Q96DX7 344 aaPredicted RBP17.13■□□□□ 0.33
CACNA1C-222ENST00000406454 ATAD2BQ9ULI0 1458 aa17.13■□□□□ 0.33
CACNA1C-222ENST00000406454 NOP58Q9Y2X3 529 aaKnown RBP17.1■□□□□ 0.33
CACNA1C-222ENST00000406454 RALBP1Q15311 655 aa17.1■□□□□ 0.33
CACNA1C-222ENST00000406454 STK26Q9P289 416 aa17.09■□□□□ 0.33
CACNA1C-222ENST00000406454 HDGFL2Q7Z4V5 671 aaPredicted RBP17.09■□□□□ 0.33
CACNA1C-222ENST00000406454 L3MBTL2Q969R5 705 aa17.08■□□□□ 0.32
CACNA1C-222ENST00000406454 SOX12O15370 315 aa17.07■□□□□ 0.32
CACNA1C-222ENST00000406454 OS9Q13438 667 aaPredicted RBP17.07■□□□□ 0.32
CACNA1C-222ENST00000406454 HNRNPMP52272 730 aaKnown RBP eCLIP17.07■□□□□ 0.32
CACNA1C-222ENST00000406454 CCDC18Q5T9S5 1454 aa17.05■□□□□ 0.32
CACNA1C-222ENST00000406454 CDK11BP21127 795 aaKnown RBP17.05■□□□□ 0.32
CACNA1C-222ENST00000406454 RSPH4AQ5TD94 716 aa17.05■□□□□ 0.32
CACNA1C-222ENST00000406454 KIF3BO15066 747 aa17.04■□□□□ 0.32
CACNA1C-222ENST00000406454 TRHP20396 242 aaPredicted RBP17.04■□□□□ 0.32
CACNA1C-222ENST00000406454 ZRSR1Q15695 479 aaKnown RBP17.03■□□□□ 0.32
CACNA1C-222ENST00000406454 ERICH6BQ5W0A0 696 aa17.03■□□□□ 0.32
CACNA1C-222ENST00000406454 HSP90AB1P08238 724 aaKnown RBP17.02■□□□□ 0.32
CACNA1C-222ENST00000406454 EIF3AQ14152 1382 aaKnown RBP17.02■□□□□ 0.31
CACNA1C-222ENST00000406454 PTMAP06454 111 aaKnown RBP17.01■□□□□ 0.31
CACNA1C-222ENST00000406454 JPH4Q96JJ6 628 aa17.01■□□□□ 0.31
CACNA1C-222ENST00000406454 RCAN3Q9UKA8 241 aa17.01■□□□□ 0.31
CACNA1C-222ENST00000406454 U2AF1L5P0DN76 240 aaPredicted RBP17.01■□□□□ 0.31
CACNA1C-222ENST00000406454 U2AF1Q01081 240 aaKnown RBP eCLIP17.01■□□□□ 0.31
CACNA1C-222ENST00000406454 RUSC2Q8N2Y8 1516 aa17■□□□□ 0.31
CACNA1C-222ENST00000406454 SPAG9O60271 1321 aaKnown RBP17■□□□□ 0.31
CACNA1C-222ENST00000406454 SMARCA4P51532 1647 aa17■□□□□ 0.31
CACNA1C-222ENST00000406454 TPRNQ4KMQ1 711 aa17■□□□□ 0.31
CACNA1C-222ENST00000406454 RTF1Q92541 710 aaKnown RBP17■□□□□ 0.31
CACNA1C-222ENST00000406454 IPO8O15397 1037 aaKnown RBP16.98■□□□□ 0.31
CACNA1C-222ENST00000406454 DHX57Q6P158 1386 aaKnown RBP16.97■□□□□ 0.31
CACNA1C-222ENST00000406454 HSCBQ8IWL3 235 aa16.96■□□□□ 0.31
CACNA1C-222ENST00000406454 KCNJ4P48050 445 aa16.96■□□□□ 0.31
CACNA1C-222ENST00000406454 FANCD2Q9BXW9 1451 aa16.95■□□□□ 0.3
CACNA1C-222ENST00000406454 CALD1Q05682 793 aaKnown RBP16.95■□□□□ 0.3
CACNA1C-222ENST00000406454 FGD1P98174 961 aa16.95■□□□□ 0.3
CACNA1C-222ENST00000406454 RBM19Q9Y4C8 960 aaKnown RBP16.94■□□□□ 0.3
CACNA1C-222ENST00000406454 NLRP13Q86W25 1043 aa16.93■□□□□ 0.3
CACNA1C-222ENST00000406454 CFAP44Q96MT7 982 aa16.92■□□□□ 0.3
CACNA1C-222ENST00000406454 NPHP1O15259 732 aa16.91■□□□□ 0.3
CACNA1C-222ENST00000406454 WASHC2CQ9Y4E1 1318 aa16.91■□□□□ 0.3
CACNA1C-222ENST00000406454 TERF2IPQ9NYB0 399 aa16.91■□□□□ 0.3
CACNA1C-222ENST00000406454 RWDD1Q9H446 243 aaPredicted RBP16.9■□□□□ 0.3
CACNA1C-222ENST00000406454 MCCP23508 829 aa16.9■□□□□ 0.3
CACNA1C-222ENST00000406454 ITPRIPQ8IWB1 547 aa16.89■□□□□ 0.29
CACNA1C-222ENST00000406454 GOLGA2Q08379 1002 aa16.89■□□□□ 0.29
CACNA1C-222ENST00000406454 PAK3O75914 559 aaPredicted RBP16.89■□□□□ 0.29
CACNA1C-222ENST00000406454 PDE3BQ13370 1112 aa16.88■□□□□ 0.29
CACNA1C-222ENST00000406454 TCERG1O14776 1098 aaKnown RBP16.88■□□□□ 0.29
CACNA1C-222ENST00000406454 DNTTIP2Q5QJE6 756 aaKnown RBP16.87■□□□□ 0.29
CACNA1C-222ENST00000406454 NUTM2DQ5VT03 806 aaPredicted RBP16.87■□□□□ 0.29
CACNA1C-222ENST00000406454 NCBP3Q53F19 620 aaKnown RBP16.87■□□□□ 0.29
CACNA1C-222ENST00000406454 CCDC144AA2RUR9 1427 aa16.86■□□□□ 0.29
CACNA1C-222ENST00000406454 NAP1L2Q9ULW6 460 aaPredicted RBP16.86■□□□□ 0.29
CACNA1C-222ENST00000406454 PLCB2Q00722 1185 aa16.86■□□□□ 0.29
CACNA1C-222ENST00000406454 TAOK2Q9UL54 1235 aa16.86■□□□□ 0.29
CACNA1C-222ENST00000406454 APBB1O00213 710 aa16.86■□□□□ 0.29
CACNA1C-222ENST00000406454 ST20-MTHFSA0A0A6YYL1 179 aa16.85■□□□□ 0.29
CACNA1C-222ENST00000406454 PHLDB1Q86UU1 1377 aa16.85■□□□□ 0.29
CACNA1C-222ENST00000406454 KIF15Q9NS87 1388 aa16.85■□□□□ 0.29
CACNA1C-222ENST00000406454 PTPRGP23470 1445 aa16.85■□□□□ 0.29
CACNA1C-222ENST00000406454 IGF1RP08069 1367 aa16.85■□□□□ 0.29
CACNA1C-222ENST00000406454 CCDC146Q8IYE0 955 aa16.84■□□□□ 0.29
CACNA1C-222ENST00000406454 SPRYD3Q8NCJ5 442 aa16.84■□□□□ 0.29
CACNA1C-222ENST00000406454 MYBBP1AQ9BQG0 1328 aaKnown RBP16.83■□□□□ 0.28
CACNA1C-222ENST00000406454 PMFBP1Q8TBY8 1022 aa16.83■□□□□ 0.28
CACNA1C-222ENST00000406454 SMC4Q9NTJ3 1288 aa16.83■□□□□ 0.28
CACNA1C-222ENST00000406454 TRAK1Q9UPV9 953 aa16.83■□□□□ 0.28
CACNA1C-222ENST00000406454 GOLGA6L4A6NEF3 574 aa16.82■□□□□ 0.28
CACNA1C-222ENST00000406454 CSB-PGBD3P0DP91 1061 aa16.81■□□□□ 0.28
CACNA1C-222ENST00000406454 EID1Q9Y6B2 187 aa16.81■□□□□ 0.28
CACNA1C-222ENST00000406454 STK31Q9BXU1 1019 aa16.8■□□□□ 0.28
CACNA1C-222ENST00000406454 PANK3Q9H999 370 aa16.8■□□□□ 0.28
CACNA1C-222ENST00000406454 FGD5Q6ZNL6 1462 aa16.8■□□□□ 0.28
CACNA1C-222ENST00000406454 CENPJQ9HC77 1338 aaPredicted RBP16.8■□□□□ 0.28
CACNA1C-222ENST00000406454 CHMP4AQ9BY43 222 aa16.8■□□□□ 0.28
CACNA1C-222ENST00000406454 UACAQ9BZF9 1416 aa16.78■□□□□ 0.28
CACNA1C-222ENST00000406454 PRKRIP1Q9H875 184 aaPredicted RBP16.78■□□□□ 0.28
CACNA1C-222ENST00000406454 GOLGA6L6A8MZA4 724 aa16.77■□□□□ 0.28
CACNA1C-222ENST00000406454 KIAA1211Q6ZU35 1233 aa16.77■□□□□ 0.28
CACNA1C-222ENST00000406454 CLUAP1Q96AJ1 413 aa16.77■□□□□ 0.28
CACNA1C-222ENST00000406454 LMOD3Q0VAK6 560 aa16.77■□□□□ 0.27
CACNA1C-222ENST00000406454 L1TD1Q5T7N2 865 aaKnown RBP16.77■□□□□ 0.27
CACNA1C-222ENST00000406454 NGDNQ8NEJ9 315 aaKnown RBP16.77■□□□□ 0.27
CACNA1C-222ENST00000406454 NAP1L5Q96NT1 182 aaPredicted RBP16.77■□□□□ 0.27
CACNA1C-222ENST00000406454 GAPVD1Q14C86 1478 aa16.76■□□□□ 0.27
CACNA1C-222ENST00000406454 RTN4Q9NQC3 1192 aaKnown RBP16.76■□□□□ 0.27
CACNA1C-222ENST00000406454 USP47Q96K76 1375 aa16.75■□□□□ 0.27
CACNA1C-222ENST00000406454 TSHZ2Q9NRE2 1034 aa16.75■□□□□ 0.27
CACNA1C-222ENST00000406454 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.75■□□□□ 0.27
CACNA1C-222ENST00000406454 TULP1O00294 542 aaPredicted RBP16.75■□□□□ 0.27
CACNA1C-222ENST00000406454 RAD54L2Q9Y4B4 1467 aa16.74■□□□□ 0.27
CACNA1C-222ENST00000406454 VGFO15240 615 aaPredicted RBP16.73■□□□□ 0.27
CACNA1C-222ENST00000406454 HMMRO75330 724 aa16.73■□□□□ 0.27
CACNA1C-222ENST00000406454 DEKP35659 375 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms