RNA–Protein interactions for RNA: ENST00000406453.3

SLC29A4-203, Transcript of solute carrier family 29 member 4, humanhuman

TSL 1 (best) BASIC

Gene SLC29A4, Length 2,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC29A4-203ENST00000406453 CDC42BPAQ5VT25 1732 aa21.35■■□□□ 1.01
SLC29A4-203ENST00000406453 DNMT1P26358 1616 aaKnown RBP21.34■■□□□ 1.01
SLC29A4-203ENST00000406453 DIEXFQ68CQ4 756 aaKnown RBP21.34■■□□□ 1.01
SLC29A4-203ENST00000406453 ITSN2Q9NZM3 1697 aa21.33■■□□□ 1.01
SLC29A4-203ENST00000406453 PELP1Q8IZL8 1130 aaKnown RBP21.33■■□□□ 1.01
SLC29A4-203ENST00000406453 TRIM52Q96A61 297 aa21.31■■□□□ 1
SLC29A4-203ENST00000406453 GCC2Q8IWJ2 1684 aa21.31■■□□□ 1
SLC29A4-203ENST00000406453 ABCC2Q92887 1545 aa21.31■■□□□ 1
SLC29A4-203ENST00000406453 KCNH8Q96L42 1107 aa21.31■■□□□ 1
SLC29A4-203ENST00000406453 HNRNPMP52272 730 aaKnown RBP eCLIP21.25■□□□□ 0.99
SLC29A4-203ENST00000406453 FOXD1Q16676 465 aa21.25■□□□□ 0.99
SLC29A4-203ENST00000406453 AKNAQ7Z591 1439 aa21.25■□□□□ 0.99
SLC29A4-203ENST00000406453 DENND4BO75064 1496 aaPredicted RBP21.25■□□□□ 0.99
SLC29A4-203ENST00000406453 TTC37Q6PGP7 1564 aa21.24■□□□□ 0.99
SLC29A4-203ENST00000406453 ZCCHC11Q5TAX3 1644 aaKnown RBP21.23■□□□□ 0.99
SLC29A4-203ENST00000406453 CDC42BPBQ9Y5S2 1711 aa21.22■□□□□ 0.99
SLC29A4-203ENST00000406453 ROCK1Q13464 1354 aa21.21■□□□□ 0.99
SLC29A4-203ENST00000406453 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.2■□□□□ 0.98
SLC29A4-203ENST00000406453 OSCARQ8IYS5 282 aa21.2■□□□□ 0.98
SLC29A4-203ENST00000406453 NCOA1Q15788 1441 aa21.19■□□□□ 0.98
SLC29A4-203ENST00000406453 CROCC2H7BZ55 1655 aa21.18■□□□□ 0.98
SLC29A4-203ENST00000406453 MPHOSPH9Q99550 1183 aa21.18■□□□□ 0.98
SLC29A4-203ENST00000406453 SAMD9LQ8IVG5 1584 aa21.17■□□□□ 0.98
SLC29A4-203ENST00000406453 PREX2Q70Z35 1606 aa21.16■□□□□ 0.98
SLC29A4-203ENST00000406453 KDM5BQ9UGL1 1544 aa21.16■□□□□ 0.98
SLC29A4-203ENST00000406453 UHRF1BP1LA0JNW5 1464 aa21.14■□□□□ 0.98
SLC29A4-203ENST00000406453 ADGBQ8N7X0 1667 aa21.14■□□□□ 0.97
SLC29A4-203ENST00000406453 ARHGAP5Q13017 1502 aa21.13■□□□□ 0.97
SLC29A4-203ENST00000406453 C9orf84Q5VXU9 1444 aa21.12■□□□□ 0.97
SLC29A4-203ENST00000406453 MBD5Q9P267 1494 aa21.12■□□□□ 0.97
SLC29A4-203ENST00000406453 TONSLQ96HA7 1378 aa21.09■□□□□ 0.97
SLC29A4-203ENST00000406453 ANKRD30AQ9BXX3 1397 aa21.09■□□□□ 0.97
SLC29A4-203ENST00000406453 SYCP2Q9BX26 1530 aa21.09■□□□□ 0.97
SLC29A4-203ENST00000406453 PPP1R15AO75807 674 aaPredicted RBP21.09■□□□□ 0.97
SLC29A4-203ENST00000406453 ADGRL2O95490 1459 aa21.09■□□□□ 0.97
SLC29A4-203ENST00000406453 TSPY4P0CV99 314 aa21.09■□□□□ 0.97
SLC29A4-203ENST00000406453 TSPY10P0CW01 314 aa21.09■□□□□ 0.97
SLC29A4-203ENST00000406453 HIRIP3Q9BW71 556 aaPredicted RBP21.08■□□□□ 0.97
SLC29A4-203ENST00000406453 SLC4A1APQ9BWU0 796 aaKnown RBP21.08■□□□□ 0.97
SLC29A4-203ENST00000406453 MYO5CQ9NQX4 1742 aa21.08■□□□□ 0.96
SLC29A4-203ENST00000406453 ANKRD50Q9ULJ7 1429 aa21.05■□□□□ 0.96
SLC29A4-203ENST00000406453 MIER1Q8N108 512 aa21.04■□□□□ 0.96
SLC29A4-203ENST00000406453 PZPP20742 1482 aa21.04■□□□□ 0.96
SLC29A4-203ENST00000406453 ARHGEF12Q9NZN5 1544 aa21.03■□□□□ 0.96
SLC29A4-203ENST00000406453 ARHGEF5Q12774 1597 aa21.03■□□□□ 0.96
SLC29A4-203ENST00000406453 CCDC141Q6ZP82 1450 aa21.03■□□□□ 0.96
SLC29A4-203ENST00000406453 SHANK2Q9UPX8 1470 aa21.02■□□□□ 0.96
SLC29A4-203ENST00000406453 KIF15Q9NS87 1388 aa21.02■□□□□ 0.96
SLC29A4-203ENST00000406453 TIMELESSQ9UNS1 1208 aa21.02■□□□□ 0.96
SLC29A4-203ENST00000406453 PLCH2O75038 1416 aa21■□□□□ 0.95
SLC29A4-203ENST00000406453 WDR7Q9Y4E6 1490 aa20.99■□□□□ 0.95
SLC29A4-203ENST00000406453 ANKRD30BQ9BXX2 1392 aa20.99■□□□□ 0.95
SLC29A4-203ENST00000406453 PKD2Q13563 968 aa20.96■□□□□ 0.95
SLC29A4-203ENST00000406453 ASXL2Q76L83 1435 aa20.96■□□□□ 0.95
SLC29A4-203ENST00000406453 NUP155O75694 1391 aa20.96■□□□□ 0.95
SLC29A4-203ENST00000406453 EFCAB2Q5VUJ9 269 aa20.96■□□□□ 0.95
SLC29A4-203ENST00000406453 L3MBTL2Q969R5 705 aa20.95■□□□□ 0.94
SLC29A4-203ENST00000406453 TRAPPC8Q9Y2L5 1435 aa20.94■□□□□ 0.94
SLC29A4-203ENST00000406453 AFAP1Q8N556 730 aa20.92■□□□□ 0.94
SLC29A4-203ENST00000406453 RSPH4AQ5TD94 716 aa20.91■□□□□ 0.94
SLC29A4-203ENST00000406453 KIAA1107Q9UPP5 1409 aa20.9■□□□□ 0.94
SLC29A4-203ENST00000406453 ABCC1P33527 1531 aa20.89■□□□□ 0.94
SLC29A4-203ENST00000406453 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.89■□□□□ 0.93
SLC29A4-203ENST00000406453 RPRD2Q5VT52 1461 aaKnown RBP20.88■□□□□ 0.93
SLC29A4-203ENST00000406453 NPM1P06748 294 aaKnown RBP eCLIP20.88■□□□□ 0.93
SLC29A4-203ENST00000406453 PLEKHH2Q8IVE3 1493 aa20.87■□□□□ 0.93
SLC29A4-203ENST00000406453 MAST1Q9Y2H9 1570 aa20.85■□□□□ 0.93
SLC29A4-203ENST00000406453 FANCAO15360 1455 aa20.85■□□□□ 0.93
SLC29A4-203ENST00000406453 ABCA9Q8IUA7 1624 aa20.85■□□□□ 0.93
SLC29A4-203ENST00000406453 YTHDC1Q96MU7 727 aaKnown RBP20.84■□□□□ 0.93
SLC29A4-203ENST00000406453 NBPF8Q3BBV2 869 aa20.84■□□□□ 0.93
SLC29A4-203ENST00000406453 CYB5RLQ6IPT4 315 aa20.84■□□□□ 0.93
SLC29A4-203ENST00000406453 DDX10Q13206 875 aaKnown RBP20.83■□□□□ 0.93
SLC29A4-203ENST00000406453 TEX14Q8IWB6 1497 aa20.83■□□□□ 0.92
SLC29A4-203ENST00000406453 ACIN1Q9UKV3 1341 aaKnown RBP20.82■□□□□ 0.92
SLC29A4-203ENST00000406453 SPAG9O60271 1321 aaKnown RBP20.8■□□□□ 0.92
SLC29A4-203ENST00000406453 PLXNC1O60486 1568 aa20.8■□□□□ 0.92
SLC29A4-203ENST00000406453 FAM135AQ9P2D6 1515 aa20.79■□□□□ 0.92
SLC29A4-203ENST00000406453 KDM5DQ9BY66 1539 aa20.79■□□□□ 0.92
SLC29A4-203ENST00000406453 MYT1Q01538 1121 aa20.78■□□□□ 0.92
SLC29A4-203ENST00000406453 SCAPERQ9BY12 1400 aa20.77■□□□□ 0.92
SLC29A4-203ENST00000406453 ZNF326Q5BKZ1 582 aaKnown RBP20.77■□□□□ 0.92
SLC29A4-203ENST00000406453 MYT1LQ9UL68 1186 aa20.77■□□□□ 0.92
SLC29A4-203ENST00000406453 ARAP3Q8WWN8 1544 aa20.77■□□□□ 0.92
SLC29A4-203ENST00000406453 ADGRL1O94910 1474 aa20.76■□□□□ 0.91
SLC29A4-203ENST00000406453 DUOX2Q9NRD8 1548 aa20.74■□□□□ 0.91
SLC29A4-203ENST00000406453 HSPA5P11021 654 aaKnown RBP20.74■□□□□ 0.91
SLC29A4-203ENST00000406453 ZFYVE16Q7Z3T8 1539 aa20.74■□□□□ 0.91
SLC29A4-203ENST00000406453 UNC13BO14795 1591 aa20.73■□□□□ 0.91
SLC29A4-203ENST00000406453 CD109Q6YHK3 1445 aa20.71■□□□□ 0.91
SLC29A4-203ENST00000406453 RIMBP3CA6NJZ7 1639 aa20.71■□□□□ 0.91
SLC29A4-203ENST00000406453 RIMBP3BA6NNM3 1639 aa20.71■□□□□ 0.91
SLC29A4-203ENST00000406453 RIMBP3Q9UFD9 1639 aa20.71■□□□□ 0.91
SLC29A4-203ENST00000406453 KDM2AQ9Y2K7 1162 aa20.69■□□□□ 0.9
SLC29A4-203ENST00000406453 ERBINQ96RT1 1412 aa20.68■□□□□ 0.9
SLC29A4-203ENST00000406453 ATP7AQ04656 1500 aa20.68■□□□□ 0.9
SLC29A4-203ENST00000406453 PLA2R1Q13018 1463 aa20.67■□□□□ 0.9
SLC29A4-203ENST00000406453 INO80Q9ULG1 1556 aaPredicted RBP20.66■□□□□ 0.9
SLC29A4-203ENST00000406453 IQGAP3Q86VI3 1631 aa20.66■□□□□ 0.9
SLC29A4-203ENST00000406453 RTEL1-TNFRSF6BF6WH68 1400 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms