RNA–Protein interactions for RNA: ENST00000406076.5

CLHC1-203, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLHC1, Length 1,777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-203ENST00000406076 PDCD7Q8N8D1 485 aaKnown RBP8.45□□□□□ -1.06
CLHC1-203ENST00000406076 SLAIN1Q8ND83 568 aa8.45□□□□□ -1.06
CLHC1-203ENST00000406076 TRIM26Q12899 539 aaPredicted RBP8.44□□□□□ -1.06
CLHC1-203ENST00000406076 TTBK1Q5TCY1 1321 aaPredicted RBP8.44□□□□□ -1.06
CLHC1-203ENST00000406076 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.42□□□□□ -1.065e-7■□□□□ 10.4
CLHC1-203ENST00000406076 CABP2Q9NPB3 220 aa8.41□□□□□ -1.06
CLHC1-203ENST00000406076 UBTFP17480 764 aaKnown RBP8.39□□□□□ -1.07
CLHC1-203ENST00000406076 SHROOM4Q9ULL8 1493 aa8.39□□□□□ -1.07
CLHC1-203ENST00000406076 MYO15BQ96JP2 1530 aa8.38□□□□□ -1.07
CLHC1-203ENST00000406076 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.38□□□□□ -1.07
CLHC1-203ENST00000406076 ILDR1Q86SU0 546 aaPredicted RBP8.38□□□□□ -1.07
CLHC1-203ENST00000406076 HRCP23327 699 aa8.35□□□□□ -1.07
CLHC1-203ENST00000406076 DPY19L2Q6NUT2 758 aa8.35□□□□□ -1.07
CLHC1-203ENST00000406076 RNF25Q96BH1 459 aaPredicted RBP8.35□□□□□ -1.07
CLHC1-203ENST00000406076 L3MBTL3Q96JM7 780 aaPredicted RBP8.35□□□□□ -1.07
CLHC1-203ENST00000406076 C3orf67Q6ZVT6 689 aa8.35□□□□□ -1.07
CLHC1-203ENST00000406076 RIOK3O14730 519 aaKnown RBP8.33□□□□□ -1.08
CLHC1-203ENST00000406076 ST18O60284 1047 aa8.33□□□□□ -1.08
CLHC1-203ENST00000406076 MYT1Q01538 1121 aa8.33□□□□□ -1.08
CLHC1-203ENST00000406076 EFCAB3Q8N7B9 438 aa8.32□□□□□ -1.08
CLHC1-203ENST00000406076 PCDH10Q9P2E7 1040 aa8.32□□□□□ -1.08
CLHC1-203ENST00000406076 SPRYD3Q8NCJ5 442 aa8.3□□□□□ -1.08
CLHC1-203ENST00000406076 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.29□□□□□ -1.08
CLHC1-203ENST00000406076 ZFP91Q96JP5 570 aaPredicted RBP8.29□□□□□ -1.08
CLHC1-203ENST00000406076 BOLA1Q9Y3E2 137 aa8.29□□□□□ -1.08
CLHC1-203ENST00000406076 SCRIBQ14160 1630 aa8.28□□□□□ -1.08
CLHC1-203ENST00000406076 ERCC6Q03468 1493 aa8.28□□□□□ -1.08
CLHC1-203ENST00000406076 SNPHO15079 494 aa8.28□□□□□ -1.08
CLHC1-203ENST00000406076 VGFO15240 615 aaPredicted RBP8.28□□□□□ -1.08
CLHC1-203ENST00000406076 G3V3G9 751 aa8.26□□□□□ -1.09
CLHC1-203ENST00000406076 TMEM121BQ9BXQ6 578 aaPredicted RBP8.25□□□□□ -1.09
CLHC1-203ENST00000406076 NESP48681 1621 aa8.24□□□□□ -1.09
CLHC1-203ENST00000406076 CDAN1Q8IWY9 1227 aa8.24□□□□□ -1.09
CLHC1-203ENST00000406076 MARVELD3Q96A59 401 aa8.22□□□□□ -1.09
CLHC1-203ENST00000406076 SOX12O15370 315 aa8.22□□□□□ -1.09
CLHC1-203ENST00000406076 ECM2O94769 699 aaPredicted RBP8.21□□□□□ -1.1
CLHC1-203ENST00000406076 MS4A4AQ96JQ5 239 aa8.2□□□□□ -1.1
CLHC1-203ENST00000406076 BCL11BQ9C0K0 894 aaPredicted RBP8.2□□□□□ -1.1
CLHC1-203ENST00000406076 PHF8Q9UPP1 1060 aa8.2□□□□□ -1.1
CLHC1-203ENST00000406076 MICALL2Q8IY33 904 aa8.18□□□□□ -1.1
CLHC1-203ENST00000406076 THOC2Q8NI27 1593 aaKnown RBP8.18□□□□□ -1.1
CLHC1-203ENST00000406076 STK24Q9Y6E0 443 aa8.17□□□□□ -1.1
CLHC1-203ENST00000406076 STK25O00506 426 aa8.16□□□□□ -1.1
CLHC1-203ENST00000406076 RGL2O15211 777 aa8.16□□□□□ -1.1
CLHC1-203ENST00000406076 HOXB3P14651 431 aaPredicted RBP8.15□□□□□ -1.1
CLHC1-203ENST00000406076 EMP3P54852 163 aa8.15□□□□□ -1.1
CLHC1-203ENST00000406076 LOC105371045A0A1W2PR82 267 aa8.14□□□□□ -1.11
CLHC1-203ENST00000406076 NLRP6P59044 892 aa8.14□□□□□ -1.11
CLHC1-203ENST00000406076 TMEM92Q6UXU6 159 aa8.14□□□□□ -1.11
CLHC1-203ENST00000406076 FBXO22Q8NEZ5 403 aa8.13□□□□□ -1.11
CLHC1-203ENST00000406076 MFRPQ9BY79 579 aa8.12□□□□□ -1.11
CLHC1-203ENST00000406076 BRPF1P55201 1214 aaPredicted RBP8.12□□□□□ -1.11
CLHC1-203ENST00000406076 ZNF710Q8N1W2 664 aa8.11□□□□□ -1.11
CLHC1-203ENST00000406076 FAM205CA6NFA0 338 aa8.1□□□□□ -1.11
CLHC1-203ENST00000406076 EIF5BO60841 1220 aaKnown RBP8.1□□□□□ -1.11
CLHC1-203ENST00000406076 NCAPD3P42695 1498 aa8.1□□□□□ -1.11
CLHC1-203ENST00000406076 ZCCHC6Q5VYS8 1495 aaKnown RBP8.1□□□□□ -1.11
CLHC1-203ENST00000406076 DCAF1Q9Y4B6 1507 aa8.1□□□□□ -1.11
CLHC1-203ENST00000406076 POTEB3A0JP26 581 aa8.1□□□□□ -1.11
CLHC1-203ENST00000406076 DOK7Q18PE1 504 aa8.1□□□□□ -1.11
CLHC1-203ENST00000406076 POTEBQ6S5H4 581 aa8.1□□□□□ -1.11
CLHC1-203ENST00000406076 HS3ST6Q96QI5 342 aa8.1□□□□□ -1.11
CLHC1-203ENST00000406076 HOXB1P14653 301 aaPredicted RBP8.07□□□□□ -1.12
CLHC1-203ENST00000406076 RIMBP2O15034 1052 aa8.05□□□□□ -1.12
CLHC1-203ENST00000406076 SMARCA2P51531 1590 aa8.05□□□□□ -1.12
CLHC1-203ENST00000406076 SPNS2Q8IVW8 549 aa8.04□□□□□ -1.12
CLHC1-203ENST00000406076 KRTAP3-3Q9BYR6 98 aa8.03□□□□□ -1.12
CLHC1-203ENST00000406076 KRTAP3-2Q9BYR7 98 aa8.03□□□□□ -1.12
CLHC1-203ENST00000406076 CCDC9Q9Y3X0 531 aaKnown RBP8.03□□□□□ -1.12
CLHC1-203ENST00000406076 KIF21AQ7Z4S6 1674 aa8.03□□□□□ -1.12
CLHC1-203ENST00000406076 RIMBP3CA6NJZ7 1639 aa8.03□□□□□ -1.12
CLHC1-203ENST00000406076 RIMBP3BA6NNM3 1639 aa8.03□□□□□ -1.12
CLHC1-203ENST00000406076 RIMBP3Q9UFD9 1639 aa8.03□□□□□ -1.12
CLHC1-203ENST00000406076 CHGAP10645 457 aaKnown RBP8.02□□□□□ -1.13
CLHC1-203ENST00000406076 ZSWIM6Q9HCJ5 1215 aa8.02□□□□□ -1.13
CLHC1-203ENST00000406076 ATAD2BQ9ULI0 1458 aa8.02□□□□□ -1.13
CLHC1-203ENST00000406076 BAZ1AQ9NRL2 1556 aaPredicted RBP8.01□□□□□ -1.13
CLHC1-203ENST00000406076 ERBB3P21860 1342 aa8.01□□□□□ -1.13
CLHC1-203ENST00000406076 ARID3AQ99856 593 aa8.01□□□□□ -1.13
CLHC1-203ENST00000406076 MMRN1Q13201 1228 aa8□□□□□ -1.13
CLHC1-203ENST00000406076 GPR153Q6NV75 609 aa8□□□□□ -1.13
CLHC1-203ENST00000406076 C2orf72A6NCS6 295 aa7.99□□□□□ -1.13
CLHC1-203ENST00000406076 KIF3CO14782 793 aa7.99□□□□□ -1.13
CLHC1-203ENST00000406076 PPP1R37O75864 691 aa7.99□□□□□ -1.13
CLHC1-203ENST00000406076 ZMYND15Q9H091 742 aa7.99□□□□□ -1.13
CLHC1-203ENST00000406076 VARS2Q5ST30 1063 aaKnown RBP7.98□□□□□ -1.13
CLHC1-203ENST00000406076 HS6ST3Q8IZP7 471 aa7.98□□□□□ -1.13
CLHC1-203ENST00000406076 ARSIQ5FYB1 569 aa7.97□□□□□ -1.13
CLHC1-203ENST00000406076 NEUROD2Q15784 382 aa7.96□□□□□ -1.14
CLHC1-203ENST00000406076 RSPH6AQ9H0K4 717 aa7.96□□□□□ -1.14
CLHC1-203ENST00000406076 KHSRPQ92945 711 aaKnown RBP eCLIP7.95□□□□□ -1.141e-6■■□□□ 13.8
CLHC1-203ENST00000406076 ZBTB7CA1YPR0 619 aa7.94□□□□□ -1.14
CLHC1-203ENST00000406076 NECTIN2Q92692 538 aa7.94□□□□□ -1.14
CLHC1-203ENST00000406076 ARHGEF11O15085 1522 aa7.94□□□□□ -1.14
CLHC1-203ENST00000406076 CYB5RLQ6IPT4 315 aa7.94□□□□□ -1.14
CLHC1-203ENST00000406076 TMC2Q8TDI7 906 aa7.94□□□□□ -1.14
CLHC1-203ENST00000406076 C1orf115Q9H7X2 142 aa7.94□□□□□ -1.14
CLHC1-203ENST00000406076 LMOD2Q6P5Q4 547 aa7.93□□□□□ -1.14
CLHC1-203ENST00000406076 LAMC3Q9Y6N6 1575 aa7.93□□□□□ -1.14
CLHC1-203ENST00000406076 HMGXB3Q12766 1538 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms