RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 LRRC9Q6ZRR7 1453 aa9.55□□□□□ -0.88
HDAC9-202ENST00000405010 VSIG10Q8N0Z9 540 aa9.55□□□□□ -0.88
HDAC9-202ENST00000405010 GZF1Q9H116 711 aaPredicted RBP9.55□□□□□ -0.88
HDAC9-202ENST00000405010 ARID4BQ4LE39 1312 aaPredicted RBP9.55□□□□□ -0.88
HDAC9-202ENST00000405010 TSPY4P0CV99 314 aa9.55□□□□□ -0.88
HDAC9-202ENST00000405010 TSPY10P0CW01 314 aa9.55□□□□□ -0.88
HDAC9-202ENST00000405010 KIF7Q2M1P5 1343 aa9.55□□□□□ -0.88
HDAC9-202ENST00000405010 NLRP13Q86W25 1043 aa9.54□□□□□ -0.88
HDAC9-202ENST00000405010 KTN1Q86UP2 1357 aaKnown RBP9.54□□□□□ -0.88
HDAC9-202ENST00000405010 FAM161AQ3B820 660 aa9.54□□□□□ -0.88
HDAC9-202ENST00000405010 SPRYD3Q8NCJ5 442 aa9.54□□□□□ -0.88
HDAC9-202ENST00000405010 CRBNQ96SW2 442 aa9.53□□□□□ -0.88
HDAC9-202ENST00000405010 KNSTRNQ9Y448 316 aa9.53□□□□□ -0.88
HDAC9-202ENST00000405010 HSP90AA2PQ14568 343 aaPredicted RBP9.53□□□□□ -0.88
HDAC9-202ENST00000405010 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.53□□□□□ -0.88
HDAC9-202ENST00000405010 BACH2Q9BYV9 841 aa9.53□□□□□ -0.88
HDAC9-202ENST00000405010 ERICH3Q5RHP9 1530 aa9.53□□□□□ -0.88
HDAC9-202ENST00000405010 GOLGA6L3A6NEY3 463 aa9.52□□□□□ -0.89
HDAC9-202ENST00000405010 DCAF11Q8TEB1 546 aa9.52□□□□□ -0.89
HDAC9-202ENST00000405010 GOLGA6L22H0YM25 854 aa9.51□□□□□ -0.89
HDAC9-202ENST00000405010 CFDP1Q9UEE9 299 aaPredicted RBP9.51□□□□□ -0.89
HDAC9-202ENST00000405010 PRXQ9BXM0 1461 aa9.51□□□□□ -0.89
HDAC9-202ENST00000405010 MYBBP1AQ9BQG0 1328 aaKnown RBP9.51□□□□□ -0.89
HDAC9-202ENST00000405010 SMG6Q86US8 1419 aaKnown RBP9.51□□□□□ -0.89
HDAC9-202ENST00000405010 CENPQQ7L2Z9 268 aaPredicted RBP9.51□□□□□ -0.89
HDAC9-202ENST00000405010 ROCK2O75116 1388 aaKnown RBP9.51□□□□□ -0.89
HDAC9-202ENST00000405010 PKD2Q13563 968 aa9.51□□□□□ -0.89
HDAC9-202ENST00000405010 FGD6Q6ZV73 1430 aa9.5□□□□□ -0.89
HDAC9-202ENST00000405010 KIF15Q9NS87 1388 aa9.5□□□□□ -0.89
HDAC9-202ENST00000405010 FBLN2P98095 1184 aa9.49□□□□□ -0.89
HDAC9-202ENST00000405010 FRAT2O75474 233 aaPredicted RBP9.49□□□□□ -0.89
HDAC9-202ENST00000405010 ATAD2BQ9ULI0 1458 aa9.49□□□□□ -0.89
HDAC9-202ENST00000405010 MAPKBP1O60336 1514 aa9.49□□□□□ -0.89
HDAC9-202ENST00000405010 USP47Q96K76 1375 aa9.48□□□□□ -0.89
HDAC9-202ENST00000405010 NCLP19338 710 aaKnown RBP9.48□□□□□ -0.89
HDAC9-202ENST00000405010 NEUROD2Q15784 382 aa9.48□□□□□ -0.89
HDAC9-202ENST00000405010 FAM43AQ8N2R8 423 aa9.47□□□□□ -0.89
HDAC9-202ENST00000405010 MYH16Q9H6N6 1097 aa9.47□□□□□ -0.89
HDAC9-202ENST00000405010 HSCBQ8IWL3 235 aa9.47□□□□□ -0.89
HDAC9-202ENST00000405010 UBE2Q2Q8WVN8 375 aa9.47□□□□□ -0.89
HDAC9-202ENST00000405010 ST20-MTHFSA0A0A6YYL1 179 aa9.47□□□□□ -0.89
HDAC9-202ENST00000405010 IGF1RP08069 1367 aa9.46□□□□□ -0.89
HDAC9-202ENST00000405010 PKNOX2Q96KN3 472 aa9.46□□□□□ -0.89
HDAC9-202ENST00000405010 TMF1P82094 1093 aa9.45□□□□□ -0.9
HDAC9-202ENST00000405010 GOLGA2Q08379 1002 aa9.45□□□□□ -0.9
HDAC9-202ENST00000405010 TIAM1Q13009 1591 aa9.45□□□□□ -0.9
HDAC9-202ENST00000405010 HSP90AB1P08238 724 aaKnown RBP9.45□□□□□ -0.9
HDAC9-202ENST00000405010 FTSJ3Q8IY81 847 aaKnown RBP9.45□□□□□ -0.9
HDAC9-202ENST00000405010 PNISRQ8TF01 805 aaKnown RBP9.45□□□□□ -0.9
HDAC9-202ENST00000405010 EIF4G1Q04637 1599 aaKnown RBP9.45□□□□□ -0.9
HDAC9-202ENST00000405010 C11orf95C9JLR9 678 aaPredicted RBP9.45□□□□□ -0.9
HDAC9-202ENST00000405010 MSNP26038 577 aaKnown RBP9.45□□□□□ -0.9
HDAC9-202ENST00000405010 CDCA8Q53HL2 280 aa9.45□□□□□ -0.9
HDAC9-202ENST00000405010 TNNT2P45379 298 aaPredicted RBP9.44□□□□□ -0.9
HDAC9-202ENST00000405010 NBPF8Q3BBV2 869 aa9.44□□□□□ -0.9
HDAC9-202ENST00000405010 CDCA7LQ96GN5 454 aa9.44□□□□□ -0.9
HDAC9-202ENST00000405010 PTMAP06454 111 aaKnown RBP9.43□□□□□ -0.9
HDAC9-202ENST00000405010 HFM1A2PYH4 1435 aa9.43□□□□□ -0.9
HDAC9-202ENST00000405010 DNTTIP2Q5QJE6 756 aaKnown RBP9.42□□□□□ -0.9
HDAC9-202ENST00000405010 MYOM3Q5VTT5 1437 aa9.42□□□□□ -0.9
HDAC9-202ENST00000405010 BRD4O60885 1362 aaPredicted RBP9.41□□□□□ -0.9
HDAC9-202ENST00000405010 GBP4Q96PP9 640 aa9.41□□□□□ -0.9
HDAC9-202ENST00000405010 MAPK8IP3Q9UPT6 1336 aa9.41□□□□□ -0.9
HDAC9-202ENST00000405010 SKAP1Q86WV1 359 aa9.4□□□□□ -0.9
HDAC9-202ENST00000405010 MFAP1P55081 439 aaKnown RBP9.4□□□□□ -0.91
HDAC9-202ENST00000405010 TOP2BQ02880 1626 aa9.4□□□□□ -0.91
HDAC9-202ENST00000405010 ARID3AQ99856 593 aa9.39□□□□□ -0.91
HDAC9-202ENST00000405010 NUP155O75694 1391 aa9.39□□□□□ -0.91
HDAC9-202ENST00000405010 UNC13AQ9UPW8 1703 aa9.39□□□□□ -0.91
HDAC9-202ENST00000405010 PLEKHD1A6NEE1 506 aa9.39□□□□□ -0.91
HDAC9-202ENST00000405010 CCDC146Q8IYE0 955 aa9.39□□□□□ -0.91
HDAC9-202ENST00000405010 PMFBP1Q8TBY8 1022 aa9.39□□□□□ -0.91
HDAC9-202ENST00000405010 RWDD1Q9H446 243 aaPredicted RBP9.39□□□□□ -0.91
HDAC9-202ENST00000405010 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.38□□□□□ -0.91
HDAC9-202ENST00000405010 CASKIN1Q8WXD9 1431 aa9.38□□□□□ -0.91
HDAC9-202ENST00000405010 NAIPQ13075 1403 aa9.38□□□□□ -0.91
HDAC9-202ENST00000405010 CHGAP10645 457 aaKnown RBP9.38□□□□□ -0.91
HDAC9-202ENST00000405010 PANK3Q9H999 370 aa9.38□□□□□ -0.91
HDAC9-202ENST00000405010 DDX11L8A8MPP1 907 aa9.37□□□□□ -0.91
HDAC9-202ENST00000405010 CFAP53Q96M91 514 aa9.37□□□□□ -0.91
HDAC9-202ENST00000405010 NCOA2Q15596 1464 aa9.37□□□□□ -0.91
HDAC9-202ENST00000405010 NCOA1Q15788 1441 aa9.37□□□□□ -0.91
HDAC9-202ENST00000405010 CENPJQ9HC77 1338 aaPredicted RBP9.36□□□□□ -0.91
HDAC9-202ENST00000405010 CLUAP1Q96AJ1 413 aa9.36□□□□□ -0.91
HDAC9-202ENST00000405010 POGKQ9P215 609 aa9.36□□□□□ -0.91
HDAC9-202ENST00000405010 CGNL1Q0VF96 1302 aa9.36□□□□□ -0.91
HDAC9-202ENST00000405010 COG6Q9Y2V7 657 aa9.36□□□□□ -0.91
HDAC9-202ENST00000405010 FYCO1Q9BQS8 1478 aa9.36□□□□□ -0.91
HDAC9-202ENST00000405010 WASHC2CQ9Y4E1 1318 aa9.36□□□□□ -0.91
HDAC9-202ENST00000405010 CUX1P39880 1505 aa9.36□□□□□ -0.91
HDAC9-202ENST00000405010 BICRAQ9NZM4 1560 aa9.35□□□□□ -0.91
HDAC9-202ENST00000405010 PTMSP20962 102 aa9.35□□□□□ -0.91
HDAC9-202ENST00000405010 CHMP5Q9NZZ3 219 aa9.35□□□□□ -0.91
HDAC9-202ENST00000405010 ANKRD30AQ9BXX3 1397 aa9.35□□□□□ -0.91
HDAC9-202ENST00000405010 MAP3K1Q13233 1512 aa9.35□□□□□ -0.91
HDAC9-202ENST00000405010 TDRD9Q8NDG6 1382 aaKnown RBP9.34□□□□□ -0.91
HDAC9-202ENST00000405010 MRE11P49959 708 aa9.34□□□□□ -0.91
HDAC9-202ENST00000405010 APAF1O14727 1248 aa9.32□□□□□ -0.92
HDAC9-202ENST00000405010 CFTRP13569 1480 aa9.32□□□□□ -0.92
HDAC9-202ENST00000405010 FOXD4L1Q9NU39 408 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms