RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 SCAPERQ9BY12 1400 aa29.78■■■□□ 2.36
HDAC11-204ENST00000404040 FMN1Q68DA7 1419 aa29.77■■■□□ 2.36
HDAC11-204ENST00000404040 LRRIQ1Q96JM4 1722 aa29.76■■■□□ 2.36
HDAC11-204ENST00000404040 ARHGAP35Q9NRY4 1499 aa29.74■■■□□ 2.35
HDAC11-204ENST00000404040 ARHGEF12Q9NZN5 1544 aa29.73■■■□□ 2.35
HDAC11-204ENST00000404040 PREX1Q8TCU6 1659 aa29.71■■■□□ 2.35
HDAC11-204ENST00000404040 C9orf84Q5VXU9 1444 aa29.71■■■□□ 2.35
HDAC11-204ENST00000404040 ATP10AO60312 1499 aa29.7■■■□□ 2.35
HDAC11-204ENST00000404040 HSPA2P54652 639 aa29.69■■■□□ 2.34
HDAC11-204ENST00000404040 KDM5CP41229 1560 aa29.68■■■□□ 2.34
HDAC11-204ENST00000404040 PLPPR3Q6T4P5 718 aa29.67■■■□□ 2.34
HDAC11-204ENST00000404040 MLECQ14165 292 aa29.65■■■□□ 2.34
HDAC11-204ENST00000404040 ZNF518AQ6AHZ1 1483 aa29.65■■■□□ 2.34
HDAC11-204ENST00000404040 TROQ12816 1431 aaPredicted RBP29.64■■■□□ 2.34
HDAC11-204ENST00000404040 CDC42BPBQ9Y5S2 1711 aa29.64■■■□□ 2.34
HDAC11-204ENST00000404040 ARHGAP5Q13017 1502 aa29.64■■■□□ 2.34
HDAC11-204ENST00000404040 UBTFP17480 764 aaKnown RBP29.63■■■□□ 2.33
HDAC11-204ENST00000404040 EFCAB2Q5VUJ9 269 aa29.63■■■□□ 2.33
HDAC11-204ENST00000404040 ATP1B4Q9UN42 357 aaPredicted RBP29.61■■■□□ 2.33
HDAC11-204ENST00000404040 CDK11AQ9UQ88 783 aaPredicted RBP29.6■■■□□ 2.33
HDAC11-204ENST00000404040 DIP2CQ9Y2E4 1556 aa29.6■■■□□ 2.33
HDAC11-204ENST00000404040 EHMT2Q96KQ7 1210 aa29.59■■■□□ 2.33
HDAC11-204ENST00000404040 CLIP1P30622 1438 aa29.59■■■□□ 2.33
HDAC11-204ENST00000404040 PREX2Q70Z35 1606 aa29.59■■■□□ 2.33
HDAC11-204ENST00000404040 REREQ9P2R6 1566 aa29.58■■■□□ 2.33
HDAC11-204ENST00000404040 ABCA6Q8N139 1617 aa29.56■■■□□ 2.32
HDAC11-204ENST00000404040 SETD1BQ9UPS6 1966 aaKnown RBP29.56■■■□□ 2.32
HDAC11-204ENST00000404040 ITSN2Q9NZM3 1697 aa29.54■■■□□ 2.32
HDAC11-204ENST00000404040 STRCQ7RTU9 1775 aa29.53■■■□□ 2.32
HDAC11-204ENST00000404040 ABCC1P33527 1531 aa29.51■■■□□ 2.32
HDAC11-204ENST00000404040 CHIC1Q5VXU3 224 aa29.51■■■□□ 2.31
HDAC11-204ENST00000404040 C3P01024 1663 aa29.5■■■□□ 2.31
HDAC11-204ENST00000404040 CDC42BPAQ5VT25 1732 aa29.49■■■□□ 2.31
HDAC11-204ENST00000404040 MLH3Q9UHC1 1453 aa29.48■■■□□ 2.31
HDAC11-204ENST00000404040 AFAP1Q8N556 730 aa29.47■■■□□ 2.31
HDAC11-204ENST00000404040 CCDC18Q5T9S5 1454 aa29.47■■■□□ 2.31
HDAC11-204ENST00000404040 CERKQ8TCT0 537 aa29.45■■■□□ 2.31
HDAC11-204ENST00000404040 CEBPAP49715 358 aaPredicted RBP29.44■■■□□ 2.3
HDAC11-204ENST00000404040 KIDINS220Q9ULH0 1771 aa29.44■■■□□ 2.3
HDAC11-204ENST00000404040 AGLP35573 1532 aa29.43■■■□□ 2.3
HDAC11-204ENST00000404040 CASKIN1Q8WXD9 1431 aa29.43■■■□□ 2.3
HDAC11-204ENST00000404040 UHRF1BP1Q6BDS2 1440 aa29.42■■■□□ 2.3
HDAC11-204ENST00000404040 TRAPPC8Q9Y2L5 1435 aa29.39■■■□□ 2.3
HDAC11-204ENST00000404040 MYT1LQ9UL68 1186 aa29.37■■■□□ 2.29
HDAC11-204ENST00000404040 FYCO1Q9BQS8 1478 aa29.34■■■□□ 2.29
HDAC11-204ENST00000404040 MROH2AA6NES4 1674 aa29.31■■■□□ 2.28
HDAC11-204ENST00000404040 SAMD9LQ8IVG5 1584 aa29.31■■■□□ 2.28
HDAC11-204ENST00000404040 DMRT2Q9Y5R5 561 aa29.29■■■□□ 2.28
HDAC11-204ENST00000404040 SYCP2Q9BX26 1530 aa29.27■■■□□ 2.28
HDAC11-204ENST00000404040 CNTLNQ9NXG0 1405 aa29.26■■■□□ 2.27
HDAC11-204ENST00000404040 SUPT6HQ7KZ85 1726 aaKnown RBP29.25■■■□□ 2.27
HDAC11-204ENST00000404040 PTPRTO14522 1441 aa29.24■■■□□ 2.27
HDAC11-204ENST00000404040 INO80Q9ULG1 1556 aaPredicted RBP29.22■■■□□ 2.27
HDAC11-204ENST00000404040 ESF1Q9H501 851 aaKnown RBP29.21■■■□□ 2.27
HDAC11-204ENST00000404040 GPATCH8Q9UKJ3 1502 aaKnown RBP29.2■■■□□ 2.26
HDAC11-204ENST00000404040 ATP7AQ04656 1500 aa29.19■■■□□ 2.26
HDAC11-204ENST00000404040 PLXNC1O60486 1568 aa29.18■■■□□ 2.26
HDAC11-204ENST00000404040 NCOA1Q15788 1441 aa29.18■■■□□ 2.26
HDAC11-204ENST00000404040 CLTCQ00610 1675 aaKnown RBP29.17■■■□□ 2.26
HDAC11-204ENST00000404040 LTBP4Q8N2S1 1624 aa29.16■■■□□ 2.26
HDAC11-204ENST00000404040 NPATQ14207 1427 aa29.16■■■□□ 2.26
HDAC11-204ENST00000404040 ZNF142P52746 1687 aaPredicted RBP29.15■■■□□ 2.26
HDAC11-204ENST00000404040 CAMSAP1Q5T5Y3 1602 aa29.12■■■□□ 2.25
HDAC11-204ENST00000404040 MYO3AQ8NEV4 1616 aa29.12■■■□□ 2.25
HDAC11-204ENST00000404040 PLEKHH2Q8IVE3 1493 aa29.12■■■□□ 2.25
HDAC11-204ENST00000404040 ZNF777Q9ULD5 760 aaPredicted RBP29.11■■■□□ 2.25
HDAC11-204ENST00000404040 ADGBQ8N7X0 1667 aa29.11■■■□□ 2.25
HDAC11-204ENST00000404040 KIAA1107Q9UPP5 1409 aa29.11■■■□□ 2.25
HDAC11-204ENST00000404040 SPAG9O60271 1321 aaKnown RBP29.1■■■□□ 2.25
HDAC11-204ENST00000404040 IQSEC2Q5JU85 1478 aa29.09■■■□□ 2.25
HDAC11-204ENST00000404040 A2MP01023 1474 aa29.06■■■□□ 2.24
HDAC11-204ENST00000404040 ZMYM3Q14202 1370 aa29.05■■■□□ 2.24
HDAC11-204ENST00000404040 HNRNPMP52272 730 aaKnown RBP eCLIP29.04■■■□□ 2.24
HDAC11-204ENST00000404040 TIAM1Q13009 1591 aa29.04■■■□□ 2.24
HDAC11-204ENST00000404040 CCNB3Q8WWL7 1395 aa29.02■■■□□ 2.24
HDAC11-204ENST00000404040 SPATA31D1Q6ZQQ2 1576 aa29.02■■■□□ 2.24
HDAC11-204ENST00000404040 CEP170BQ9Y4F5 1589 aaPredicted RBP29.02■■■□□ 2.24
HDAC11-204ENST00000404040 DISP3Q9P2K9 1392 aa29.01■■■□□ 2.24
HDAC11-204ENST00000404040 CFDP1Q9UEE9 299 aaPredicted RBP29■■■□□ 2.23
HDAC11-204ENST00000404040 EHBP1L1Q8N3D4 1523 aa28.98■■■□□ 2.23
HDAC11-204ENST00000404040 MTUS2Q5JR59 1369 aa28.98■■■□□ 2.23
HDAC11-204ENST00000404040 PLA2R1Q13018 1463 aa28.97■■■□□ 2.23
HDAC11-204ENST00000404040 PTPRKQ15262 1439 aa28.97■■■□□ 2.23
HDAC11-204ENST00000404040 TCOF1Q13428 1488 aaKnown RBP28.92■■■□□ 2.22
HDAC11-204ENST00000404040 MBD5Q9P267 1494 aa28.91■■■□□ 2.22
HDAC11-204ENST00000404040 ILDR2Q71H61 639 aa28.9■■■□□ 2.22
HDAC11-204ENST00000404040 POLR1AO95602 1720 aaPredicted RBP28.89■■■□□ 2.22
HDAC11-204ENST00000404040 NCKAP5LQ9HCH0 1330 aa28.89■■■□□ 2.21
HDAC11-204ENST00000404040 GGT6Q6P531 493 aa28.87■■■□□ 2.21
HDAC11-204ENST00000404040 ZNF335Q9H4Z2 1342 aaPredicted RBP28.86■■■□□ 2.21
HDAC11-204ENST00000404040 DNMT1P26358 1616 aaKnown RBP28.86■■■□□ 2.21
HDAC11-204ENST00000404040 RTEL1-TNFRSF6BF6WH68 1400 aa28.86■■■□□ 2.21
HDAC11-204ENST00000404040 CEP162Q5TB80 1403 aa28.86■■■□□ 2.21
HDAC11-204ENST00000404040 ZNF644Q9H582 1327 aaPredicted RBP28.85■■■□□ 2.21
HDAC11-204ENST00000404040 PKD2Q13563 968 aa28.84■■■□□ 2.21
HDAC11-204ENST00000404040 PPP6R1Q9UPN7 881 aa28.84■■■□□ 2.21
HDAC11-204ENST00000404040 A2ML1A8K2U0 1454 aa28.84■■■□□ 2.21
HDAC11-204ENST00000404040 FAM135AQ9P2D6 1515 aa28.82■■■□□ 2.2
HDAC11-204ENST00000404040 SOCS7O14512 581 aa28.79■■■□□ 2.2
HDAC11-204ENST00000404040 KDM5DQ9BY66 1539 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms