RNA–Protein interactions for RNA: ENST00000403807.3

VPREB1-202, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPREB1, Length 755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-202ENST00000403807 MYO5CQ9NQX4 1742 aa21.35■■□□□ 1.01
VPREB1-202ENST00000403807 ARHGAP5Q13017 1502 aa21.34■■□□□ 1.01
VPREB1-202ENST00000403807 GPATCH8Q9UKJ3 1502 aaKnown RBP21.34■■□□□ 1.01
VPREB1-202ENST00000403807 NCOA2Q15596 1464 aa21.32■■□□□ 1
VPREB1-202ENST00000403807 CFAP74Q9C0B2 1584 aa21.32■■□□□ 1
VPREB1-202ENST00000403807 ZNF777Q9ULD5 760 aaPredicted RBP21.32■■□□□ 1
VPREB1-202ENST00000403807 SUPT6HQ7KZ85 1726 aaKnown RBP21.32■■□□□ 1
VPREB1-202ENST00000403807 RAPGEF3O95398 923 aa21.3■■□□□ 1
VPREB1-202ENST00000403807 SCAPERQ9BY12 1400 aa21.29■■□□□ 1
VPREB1-202ENST00000403807 DENND4BO75064 1496 aaPredicted RBP21.28■■□□□ 1
VPREB1-202ENST00000403807 ADGRL1O94910 1474 aa21.28■■□□□ 1
VPREB1-202ENST00000403807 PREX2Q70Z35 1606 aa21.28■■□□□ 1
VPREB1-202ENST00000403807 CDC42BPBQ9Y5S2 1711 aa21.27■■□□□ 1
VPREB1-202ENST00000403807 CDC42BPAQ5VT25 1732 aa21.26■□□□□ 0.99
VPREB1-202ENST00000403807 HNRNPMP52272 730 aaKnown RBP eCLIP21.2■□□□□ 0.98
VPREB1-202ENST00000403807 AFAP1Q8N556 730 aa21.2■□□□□ 0.98
VPREB1-202ENST00000403807 ITSN2Q9NZM3 1697 aa21.2■□□□□ 0.98
VPREB1-202ENST00000403807 PLEKHH2Q8IVE3 1493 aa21.2■□□□□ 0.98
VPREB1-202ENST00000403807 PPARGC1BQ86YN6 1023 aaKnown RBP21.19■□□□□ 0.98
VPREB1-202ENST00000403807 ZNF644Q9H582 1327 aaPredicted RBP21.19■□□□□ 0.98
VPREB1-202ENST00000403807 MYOM3Q5VTT5 1437 aa21.19■□□□□ 0.98
VPREB1-202ENST00000403807 KIAA1107Q9UPP5 1409 aa21.19■□□□□ 0.98
VPREB1-202ENST00000403807 POGZQ7Z3K3 1410 aa21.18■□□□□ 0.98
VPREB1-202ENST00000403807 MIA2Q96PC5 1412 aa21.17■□□□□ 0.98
VPREB1-202ENST00000403807 ABCC1P33527 1531 aa21.16■□□□□ 0.98
VPREB1-202ENST00000403807 ZNF518AQ6AHZ1 1483 aa21.16■□□□□ 0.98
VPREB1-202ENST00000403807 MYT1LQ9UL68 1186 aa21.16■□□□□ 0.98
VPREB1-202ENST00000403807 SAMD9LQ8IVG5 1584 aa21.15■□□□□ 0.98
VPREB1-202ENST00000403807 ARHGEF12Q9NZN5 1544 aa21.15■□□□□ 0.98
VPREB1-202ENST00000403807 RSPH4AQ5TD94 716 aa21.15■□□□□ 0.98
VPREB1-202ENST00000403807 TRAPPC8Q9Y2L5 1435 aa21.14■□□□□ 0.98
VPREB1-202ENST00000403807 RICTORQ6R327 1708 aa21.13■□□□□ 0.97
VPREB1-202ENST00000403807 KDM4FA0A1W2PPD8 638 aa21.13■□□□□ 0.97
VPREB1-202ENST00000403807 FRMPD1Q5SYB0 1578 aa21.12■□□□□ 0.97
VPREB1-202ENST00000403807 MAGI2Q86UL8 1455 aa21.12■□□□□ 0.97
VPREB1-202ENST00000403807 SYCP2Q9BX26 1530 aa21.11■□□□□ 0.97
VPREB1-202ENST00000403807 CAMSAP2Q08AD1 1489 aa21.1■□□□□ 0.97
VPREB1-202ENST00000403807 ZMYM4Q5VZL5 1548 aa21.09■□□□□ 0.97
VPREB1-202ENST00000403807 SPAG9O60271 1321 aaKnown RBP21.08■□□□□ 0.97
VPREB1-202ENST00000403807 MBD5Q9P267 1494 aa21.08■□□□□ 0.97
VPREB1-202ENST00000403807 FGD6Q6ZV73 1430 aa21.07■□□□□ 0.96
VPREB1-202ENST00000403807 TSPY4P0CV99 314 aa21.07■□□□□ 0.96
VPREB1-202ENST00000403807 TSPY10P0CW01 314 aa21.07■□□□□ 0.96
VPREB1-202ENST00000403807 MLH3Q9UHC1 1453 aa21.06■□□□□ 0.96
VPREB1-202ENST00000403807 KDM5CP41229 1560 aa21.06■□□□□ 0.96
VPREB1-202ENST00000403807 YEATS2Q9ULM3 1422 aa21.04■□□□□ 0.96
VPREB1-202ENST00000403807 ZFYVE16Q7Z3T8 1539 aa21.04■□□□□ 0.96
VPREB1-202ENST00000403807 FAM50AQ14320 339 aaKnown RBP21.03■□□□□ 0.96
VPREB1-202ENST00000403807 ARID4BQ4LE39 1312 aaPredicted RBP21.02■□□□□ 0.95
VPREB1-202ENST00000403807 ATP10AO60312 1499 aa21.01■□□□□ 0.95
VPREB1-202ENST00000403807 CCDC141Q6ZP82 1450 aa21.01■□□□□ 0.95
VPREB1-202ENST00000403807 PTPN23Q9H3S7 1636 aa21.01■□□□□ 0.95
VPREB1-202ENST00000403807 TCOF1Q13428 1488 aaKnown RBP21.01■□□□□ 0.95
VPREB1-202ENST00000403807 HECW2Q9P2P5 1572 aa21■□□□□ 0.95
VPREB1-202ENST00000403807 ARHGEF5Q12774 1597 aa20.99■□□□□ 0.95
VPREB1-202ENST00000403807 ARHGEF40Q8TER5 1519 aa20.99■□□□□ 0.95
VPREB1-202ENST00000403807 RTEL1-TNFRSF6BF6WH68 1400 aa20.98■□□□□ 0.95
VPREB1-202ENST00000403807 C9orf84Q5VXU9 1444 aa20.96■□□□□ 0.95
VPREB1-202ENST00000403807 ATP7AQ04656 1500 aa20.94■□□□□ 0.94
VPREB1-202ENST00000403807 KIDINS220Q9ULH0 1771 aa20.94■□□□□ 0.94
VPREB1-202ENST00000403807 ABCC5O15440 1437 aa20.93■□□□□ 0.94
VPREB1-202ENST00000403807 DIP2CQ9Y2E4 1556 aa20.92■□□□□ 0.94
VPREB1-202ENST00000403807 DAPK1P53355 1430 aa20.91■□□□□ 0.94
VPREB1-202ENST00000403807 INO80Q9ULG1 1556 aaPredicted RBP20.9■□□□□ 0.94
VPREB1-202ENST00000403807 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.9■□□□□ 0.94
VPREB1-202ENST00000403807 ABCA6Q8N139 1617 aa20.89■□□□□ 0.94
VPREB1-202ENST00000403807 CHIC2Q9UKJ5 165 aa20.89■□□□□ 0.93
VPREB1-202ENST00000403807 MLECQ14165 292 aa20.88■□□□□ 0.93
VPREB1-202ENST00000403807 A2MP01023 1474 aa20.88■□□□□ 0.93
VPREB1-202ENST00000403807 DHX29Q7Z478 1369 aaKnown RBP20.87■□□□□ 0.93
VPREB1-202ENST00000403807 REREQ9P2R6 1566 aa20.87■□□□□ 0.93
VPREB1-202ENST00000403807 RRBP1Q9P2E9 1410 aaKnown RBP20.87■□□□□ 0.93
VPREB1-202ENST00000403807 DNMT1P26358 1616 aaKnown RBP20.86■□□□□ 0.93
VPREB1-202ENST00000403807 MAST1Q9Y2H9 1570 aa20.86■□□□□ 0.93
VPREB1-202ENST00000403807 SHANK2Q9UPX8 1470 aa20.86■□□□□ 0.93
VPREB1-202ENST00000403807 ITGAEP38570 1179 aa20.85■□□□□ 0.93
VPREB1-202ENST00000403807 RRP7BPQ9NSQ0 103 aa20.84■□□□□ 0.93
VPREB1-202ENST00000403807 ANKRD30AQ9BXX3 1397 aa20.84■□□□□ 0.93
VPREB1-202ENST00000403807 AGLP35573 1532 aa20.83■□□□□ 0.93
VPREB1-202ENST00000403807 ADGBQ8N7X0 1667 aa20.81■□□□□ 0.92
VPREB1-202ENST00000403807 SIGLEC1Q9BZZ2 1709 aa20.79■□□□□ 0.92
VPREB1-202ENST00000403807 KIF3BO15066 747 aa20.79■□□□□ 0.92
VPREB1-202ENST00000403807 GGT6Q6P531 493 aa20.79■□□□□ 0.92
VPREB1-202ENST00000403807 ESF1Q9H501 851 aaKnown RBP20.79■□□□□ 0.92
VPREB1-202ENST00000403807 KIF15Q9NS87 1388 aa20.79■□□□□ 0.92
VPREB1-202ENST00000403807 NCOA1Q15788 1441 aa20.78■□□□□ 0.92
VPREB1-202ENST00000403807 BCORL1Q5H9F3 1711 aa20.78■□□□□ 0.92
VPREB1-202ENST00000403807 CROCC2H7BZ55 1655 aa20.78■□□□□ 0.92
VPREB1-202ENST00000403807 PPP6R1Q9UPN7 881 aa20.77■□□□□ 0.92
VPREB1-202ENST00000403807 PTPRKQ15262 1439 aa20.77■□□□□ 0.91
VPREB1-202ENST00000403807 PLXNC1O60486 1568 aa20.76■□□□□ 0.91
VPREB1-202ENST00000403807 ADGRL2O95490 1459 aa20.75■□□□□ 0.91
VPREB1-202ENST00000403807 DUOX2Q9NRD8 1548 aa20.75■□□□□ 0.91
VPREB1-202ENST00000403807 ADAMTSL3P82987 1691 aa20.74■□□□□ 0.91
VPREB1-202ENST00000403807 ROCK1Q13464 1354 aa20.73■□□□□ 0.91
VPREB1-202ENST00000403807 ERBINQ96RT1 1412 aa20.7■□□□□ 0.9
VPREB1-202ENST00000403807 MADDQ8WXG6 1647 aa20.69■□□□□ 0.9
VPREB1-202ENST00000403807 WASHC2CQ9Y4E1 1318 aa20.67■□□□□ 0.9
VPREB1-202ENST00000403807 CNTLNQ9NXG0 1405 aa20.67■□□□□ 0.9
VPREB1-202ENST00000403807 PTPRMP28827 1452 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms