RNA–Protein interactions for RNA: ENST00000403792.7

SMYD3-204, Transcript of SET and MYND domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene SMYD3, Length 1,209 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-204ENST00000403792 ZFYVE16Q7Z3T8 1539 aa29.64■■■□□ 2.34
SMYD3-204ENST00000403792 PLCH2O75038 1416 aa29.63■■■□□ 2.33
SMYD3-204ENST00000403792 POGZQ7Z3K3 1410 aa29.62■■■□□ 2.33
SMYD3-204ENST00000403792 CEP162Q5TB80 1403 aa29.62■■■□□ 2.33
SMYD3-204ENST00000403792 CASKIN1Q8WXD9 1431 aa29.61■■■□□ 2.33
SMYD3-204ENST00000403792 SIGLEC1Q9BZZ2 1709 aa29.6■■■□□ 2.33
SMYD3-204ENST00000403792 LOC105371045A0A1W2PR82 267 aa29.59■■■□□ 2.33
SMYD3-204ENST00000403792 SCAPERQ9BY12 1400 aa29.58■■■□□ 2.33
SMYD3-204ENST00000403792 LRRIQ1Q96JM4 1722 aa29.55■■■□□ 2.32
SMYD3-204ENST00000403792 FYCO1Q9BQS8 1478 aa29.55■■■□□ 2.32
SMYD3-204ENST00000403792 CDK11AQ9UQ88 783 aaPredicted RBP29.53■■■□□ 2.32
SMYD3-204ENST00000403792 CCDC18Q5T9S5 1454 aa29.52■■■□□ 2.32
SMYD3-204ENST00000403792 EFCAB2Q5VUJ9 269 aa29.5■■■□□ 2.31
SMYD3-204ENST00000403792 MYO5CQ9NQX4 1742 aa29.48■■■□□ 2.31
SMYD3-204ENST00000403792 ATP10AO60312 1499 aa29.48■■■□□ 2.31
SMYD3-204ENST00000403792 HSPA2P54652 639 aa29.47■■■□□ 2.31
SMYD3-204ENST00000403792 MLECQ14165 292 aa29.46■■■□□ 2.31
SMYD3-204ENST00000403792 PLPPR3Q6T4P5 718 aa29.44■■■□□ 2.3
SMYD3-204ENST00000403792 KIF14Q15058 1648 aa29.44■■■□□ 2.3
SMYD3-204ENST00000403792 ARHGEF12Q9NZN5 1544 aa29.44■■■□□ 2.3
SMYD3-204ENST00000403792 TROQ12816 1431 aaPredicted RBP29.44■■■□□ 2.3
SMYD3-204ENST00000403792 C9orf84Q5VXU9 1444 aa29.44■■■□□ 2.3
SMYD3-204ENST00000403792 FER1L4A9Z1Z3 1794 aa29.44■■■□□ 2.3
SMYD3-204ENST00000403792 ZNF518AQ6AHZ1 1483 aa29.39■■■□□ 2.3
SMYD3-204ENST00000403792 KDM5CP41229 1560 aa29.36■■■□□ 2.29
SMYD3-204ENST00000403792 ARHGAP5Q13017 1502 aa29.35■■■□□ 2.29
SMYD3-204ENST00000403792 AFAP1Q8N556 730 aa29.34■■■□□ 2.29
SMYD3-204ENST00000403792 CEBPAP49715 358 aaPredicted RBP29.27■■■□□ 2.28
SMYD3-204ENST00000403792 PREX1Q8TCU6 1659 aa29.27■■■□□ 2.28
SMYD3-204ENST00000403792 REREQ9P2R6 1566 aa29.26■■■□□ 2.28
SMYD3-204ENST00000403792 DIP2CQ9Y2E4 1556 aa29.26■■■□□ 2.28
SMYD3-204ENST00000403792 CDC42BPBQ9Y5S2 1711 aa29.26■■■□□ 2.27
SMYD3-204ENST00000403792 VPS8Q8N3P4 1428 aa29.26■■■□□ 2.27
SMYD3-204ENST00000403792 MLH3Q9UHC1 1453 aa29.25■■■□□ 2.27
SMYD3-204ENST00000403792 CERKQ8TCT0 537 aa29.24■■■□□ 2.27
SMYD3-204ENST00000403792 PREX2Q70Z35 1606 aa29.21■■■□□ 2.27
SMYD3-204ENST00000403792 MTUS2Q5JR59 1369 aa29.21■■■□□ 2.27
SMYD3-204ENST00000403792 MYT1LQ9UL68 1186 aa29.2■■■□□ 2.26
SMYD3-204ENST00000403792 ABCA6Q8N139 1617 aa29.2■■■□□ 2.26
SMYD3-204ENST00000403792 ABCC1P33527 1531 aa29.2■■■□□ 2.26
SMYD3-204ENST00000403792 TRAPPC8Q9Y2L5 1435 aa29.2■■■□□ 2.26
SMYD3-204ENST00000403792 AGLP35573 1532 aa29.17■■■□□ 2.26
SMYD3-204ENST00000403792 SETD1BQ9UPS6 1966 aaKnown RBP29.15■■■□□ 2.26
SMYD3-204ENST00000403792 EHBP1L1Q8N3D4 1523 aa29.15■■■□□ 2.26
SMYD3-204ENST00000403792 UHRF1BP1Q6BDS2 1440 aa29.15■■■□□ 2.26
SMYD3-204ENST00000403792 ITSN2Q9NZM3 1697 aa29.14■■■□□ 2.26
SMYD3-204ENST00000403792 STRCQ7RTU9 1775 aa29.13■■■□□ 2.25
SMYD3-204ENST00000403792 CDC42BPAQ5VT25 1732 aa29.12■■■□□ 2.25
SMYD3-204ENST00000403792 DMRT2Q9Y5R5 561 aa29.12■■■□□ 2.25
SMYD3-204ENST00000403792 TIAM1Q13009 1591 aa29.12■■■□□ 2.25
SMYD3-204ENST00000403792 C3P01024 1663 aa29.09■■■□□ 2.25
SMYD3-204ENST00000403792 KIDINS220Q9ULH0 1771 aa29.09■■■□□ 2.25
SMYD3-204ENST00000403792 CCNB3Q8WWL7 1395 aa29.05■■■□□ 2.24
SMYD3-204ENST00000403792 GPATCH8Q9UKJ3 1502 aaKnown RBP29.04■■■□□ 2.24
SMYD3-204ENST00000403792 ESF1Q9H501 851 aaKnown RBP29.03■■■□□ 2.24
SMYD3-204ENST00000403792 CNTLNQ9NXG0 1405 aa29.03■■■□□ 2.24
SMYD3-204ENST00000403792 SAMD9LQ8IVG5 1584 aa29.02■■■□□ 2.24
SMYD3-204ENST00000403792 PTPRTO14522 1441 aa29.01■■■□□ 2.23
SMYD3-204ENST00000403792 SUPT6HQ7KZ85 1726 aaKnown RBP29■■■□□ 2.23
SMYD3-204ENST00000403792 MAP3K1Q13233 1512 aa28.99■■■□□ 2.23
SMYD3-204ENST00000403792 ZNF777Q9ULD5 760 aaPredicted RBP28.98■■■□□ 2.23
SMYD3-204ENST00000403792 LRRC9Q6ZRR7 1453 aa28.97■■■□□ 2.23
SMYD3-204ENST00000403792 SYCP2Q9BX26 1530 aa28.96■■■□□ 2.23
SMYD3-204ENST00000403792 CFDP1Q9UEE9 299 aaPredicted RBP28.96■■■□□ 2.23
SMYD3-204ENST00000403792 NCOA2Q15596 1464 aa28.96■■■□□ 2.23
SMYD3-204ENST00000403792 SPAG9O60271 1321 aaKnown RBP28.94■■■□□ 2.22
SMYD3-204ENST00000403792 KIAA1107Q9UPP5 1409 aa28.94■■■□□ 2.22
SMYD3-204ENST00000403792 HNRNPMP52272 730 aaKnown RBP eCLIP28.93■■■□□ 2.223e-7■■■■■ 31.9
SMYD3-204ENST00000403792 APLP2Q06481 763 aa28.92■■■□□ 2.22
SMYD3-204ENST00000403792 NPATQ14207 1427 aa28.92■■■□□ 2.22
SMYD3-204ENST00000403792 MROH2AA6NES4 1674 aa28.91■■■□□ 2.22
SMYD3-204ENST00000403792 NCOA1Q15788 1441 aa28.91■■■□□ 2.22
SMYD3-204ENST00000403792 PLEKHH2Q8IVE3 1493 aa28.9■■■□□ 2.22
SMYD3-204ENST00000403792 KANK4Q5T7N3 995 aaPredicted RBP28.89■■■□□ 2.22
SMYD3-204ENST00000403792 ZMYM3Q14202 1370 aa28.88■■■□□ 2.21
SMYD3-204ENST00000403792 ATP7AQ04656 1500 aa28.88■■■□□ 2.21
SMYD3-204ENST00000403792 PLXNC1O60486 1568 aa28.86■■■□□ 2.21
SMYD3-204ENST00000403792 INO80Q9ULG1 1556 aaPredicted RBP28.86■■■□□ 2.21
SMYD3-204ENST00000403792 LTBP4Q8N2S1 1624 aa28.86■■■□□ 2.21
SMYD3-204ENST00000403792 A2MP01023 1474 aa28.84■■■□□ 2.21
SMYD3-204ENST00000403792 CAMSAP1Q5T5Y3 1602 aa28.8■■■□□ 2.2
SMYD3-204ENST00000403792 ZNF644Q9H582 1327 aaPredicted RBP28.79■■■□□ 2.2
SMYD3-204ENST00000403792 IQSEC2Q5JU85 1478 aa28.78■■■□□ 2.2
SMYD3-204ENST00000403792 CLTCQ00610 1675 aaKnown RBP28.77■■■□□ 2.2
SMYD3-204ENST00000403792 CAMSAP2Q08AD1 1489 aa28.75■■■□□ 2.19
SMYD3-204ENST00000403792 PTPRKQ15262 1439 aa28.75■■■□□ 2.19
SMYD3-204ENST00000403792 PPP6R1Q9UPN7 881 aa28.74■■■□□ 2.19
SMYD3-204ENST00000403792 MBD5Q9P267 1494 aa28.73■■■□□ 2.19
SMYD3-204ENST00000403792 GGT6Q6P531 493 aa28.73■■■□□ 2.19
SMYD3-204ENST00000403792 ZNF142P52746 1687 aaPredicted RBP28.72■■■□□ 2.19
SMYD3-204ENST00000403792 ADGBQ8N7X0 1667 aa28.72■■■□□ 2.19
SMYD3-204ENST00000403792 NCKAP5LQ9HCH0 1330 aa28.71■■■□□ 2.19
SMYD3-204ENST00000403792 MYOM3Q5VTT5 1437 aa28.71■■■□□ 2.19
SMYD3-204ENST00000403792 MYO3AQ8NEV4 1616 aa28.71■■■□□ 2.19
SMYD3-204ENST00000403792 PLA2R1Q13018 1463 aa28.71■■■□□ 2.19
SMYD3-204ENST00000403792 DISP3Q9P2K9 1392 aa28.7■■■□□ 2.18
SMYD3-204ENST00000403792 RTEL1-TNFRSF6BF6WH68 1400 aa28.69■■■□□ 2.18
SMYD3-204ENST00000403792 CEP170BQ9Y4F5 1589 aaPredicted RBP28.68■■■□□ 2.18
SMYD3-204ENST00000403792 PKD2Q13563 968 aa28.68■■■□□ 2.18
SMYD3-204ENST00000403792 TCOF1Q13428 1488 aaKnown RBP28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms