RNA–Protein interactions for RNA: ENST00000403444.7

CEACAM1-207, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,427 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-207ENST00000403444 CHMP7Q8WUX9 453 aaPredicted RBP9.6□□□□□ -0.87
CEACAM1-207ENST00000403444 ANO8Q9HCE9 1232 aaPredicted RBP9.6□□□□□ -0.87
CEACAM1-207ENST00000403444 JPH4Q96JJ6 628 aa9.59□□□□□ -0.87
CEACAM1-207ENST00000403444 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.59□□□□□ -0.87
CEACAM1-207ENST00000403444 PLEKHG5O94827 1062 aa9.59□□□□□ -0.87
CEACAM1-207ENST00000403444 GCC2Q8IWJ2 1684 aa9.58□□□□□ -0.88
CEACAM1-207ENST00000403444 ADGBQ8N7X0 1667 aa9.58□□□□□ -0.88
CEACAM1-207ENST00000403444 BCORL1Q5H9F3 1711 aa9.58□□□□□ -0.88
CEACAM1-207ENST00000403444 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.57□□□□□ -0.88
CEACAM1-207ENST00000403444 DIP2BQ9P265 1576 aa9.57□□□□□ -0.88
CEACAM1-207ENST00000403444 MAST1Q9Y2H9 1570 aa9.57□□□□□ -0.88
CEACAM1-207ENST00000403444 DNMT1P26358 1616 aaKnown RBP9.56□□□□□ -0.88
CEACAM1-207ENST00000403444 ARHGEF5Q12774 1597 aa9.56□□□□□ -0.88
CEACAM1-207ENST00000403444 PTPN23Q9H3S7 1636 aa9.55□□□□□ -0.88
CEACAM1-207ENST00000403444 SAMD9LQ8IVG5 1584 aa9.55□□□□□ -0.88
CEACAM1-207ENST00000403444 MIER1Q8N108 512 aa9.54□□□□□ -0.88
CEACAM1-207ENST00000403444 CFAP74Q9C0B2 1584 aa9.53□□□□□ -0.88
CEACAM1-207ENST00000403444 TROQ12816 1431 aaPredicted RBP9.53□□□□□ -0.88
CEACAM1-207ENST00000403444 NCOA2Q15596 1464 aa9.53□□□□□ -0.88
CEACAM1-207ENST00000403444 PTPRGP23470 1445 aa9.52□□□□□ -0.89
CEACAM1-207ENST00000403444 CNGB1Q14028 1251 aaPredicted RBP9.52□□□□□ -0.89
CEACAM1-207ENST00000403444 RICTORQ6R327 1708 aa9.51□□□□□ -0.89
CEACAM1-207ENST00000403444 ZNF316A6NFI3 1004 aaPredicted RBP9.51□□□□□ -0.89
CEACAM1-207ENST00000403444 P3H3Q8IVL6 736 aa9.51□□□□□ -0.89
CEACAM1-207ENST00000403444 FRMPD1Q5SYB0 1578 aa9.51□□□□□ -0.89
CEACAM1-207ENST00000403444 WDR7Q9Y4E6 1490 aa9.51□□□□□ -0.89
CEACAM1-207ENST00000403444 OSCARQ8IYS5 282 aa9.51□□□□□ -0.89
CEACAM1-207ENST00000403444 BCANQ96GW7 911 aa9.51□□□□□ -0.89
CEACAM1-207ENST00000403444 PLXNC1O60486 1568 aa9.5□□□□□ -0.89
CEACAM1-207ENST00000403444 ABCC1P33527 1531 aa9.5□□□□□ -0.89
CEACAM1-207ENST00000403444 INO80Q9ULG1 1556 aaPredicted RBP9.5□□□□□ -0.89
CEACAM1-207ENST00000403444 MIA2Q96PC5 1412 aa9.49□□□□□ -0.89
CEACAM1-207ENST00000403444 GPATCH8Q9UKJ3 1502 aaKnown RBP9.49□□□□□ -0.89
CEACAM1-207ENST00000403444 KDM5CP41229 1560 aa9.49□□□□□ -0.89
CEACAM1-207ENST00000403444 PHLDB1Q86UU1 1377 aa9.49□□□□□ -0.89
CEACAM1-207ENST00000403444 HIRIP3Q9BW71 556 aaPredicted RBP9.48□□□□□ -0.89
CEACAM1-207ENST00000403444 SHANK2Q9UPX8 1470 aa9.48□□□□□ -0.89
CEACAM1-207ENST00000403444 DEPDC5O75140 1603 aa9.48□□□□□ -0.89
CEACAM1-207ENST00000403444 MYOM3Q5VTT5 1437 aa9.47□□□□□ -0.89
CEACAM1-207ENST00000403444 ADGRL2O95490 1459 aa9.46□□□□□ -0.89
CEACAM1-207ENST00000403444 KANK4Q5T7N3 995 aaPredicted RBP9.46□□□□□ -0.89
CEACAM1-207ENST00000403444 UBE2Q2Q8WVN8 375 aa9.46□□□□□ -0.89
CEACAM1-207ENST00000403444 AKNAQ7Z591 1439 aa9.46□□□□□ -0.9
CEACAM1-207ENST00000403444 MBD5Q9P267 1494 aa9.45□□□□□ -0.9
CEACAM1-207ENST00000403444 FGD6Q6ZV73 1430 aa9.45□□□□□ -0.9
CEACAM1-207ENST00000403444 ZMYM4Q5VZL5 1548 aa9.45□□□□□ -0.9
CEACAM1-207ENST00000403444 CAMSAP2Q08AD1 1489 aa9.43□□□□□ -0.9
CEACAM1-207ENST00000403444 ASXL2Q76L83 1435 aa9.43□□□□□ -0.9
CEACAM1-207ENST00000403444 SIGLEC1Q9BZZ2 1709 aa9.43□□□□□ -0.9
CEACAM1-207ENST00000403444 ARHGEF12Q9NZN5 1544 aa9.43□□□□□ -0.9
CEACAM1-207ENST00000403444 REREQ9P2R6 1566 aa9.43□□□□□ -0.9
CEACAM1-207ENST00000403444 EIF2AK4Q9P2K8 1649 aaKnown RBP9.43□□□□□ -0.9
CEACAM1-207ENST00000403444 FAM50AQ14320 339 aaKnown RBP9.42□□□□□ -0.9
CEACAM1-207ENST00000403444 UNC13BO14795 1591 aa9.42□□□□□ -0.9
CEACAM1-207ENST00000403444 MAGI2Q86UL8 1455 aa9.42□□□□□ -0.9
CEACAM1-207ENST00000403444 ARID3CA6NKF2 412 aa9.42□□□□□ -0.9
CEACAM1-207ENST00000403444 KIDINS220Q9ULH0 1771 aa9.42□□□□□ -0.9
CEACAM1-207ENST00000403444 ZFYVE16Q7Z3T8 1539 aa9.41□□□□□ -0.9
CEACAM1-207ENST00000403444 KDM5DQ9BY66 1539 aa9.41□□□□□ -0.9
CEACAM1-207ENST00000403444 PODXL2Q9NZ53 605 aa9.41□□□□□ -0.9
CEACAM1-207ENST00000403444 KDM6BO15054 1643 aa9.41□□□□□ -0.9
CEACAM1-207ENST00000403444 CCDC136Q96JN2 1154 aa9.4□□□□□ -0.9
CEACAM1-207ENST00000403444 PLCH2O75038 1416 aa9.4□□□□□ -0.9
CEACAM1-207ENST00000403444 PTPRKQ15262 1439 aa9.4□□□□□ -0.9
CEACAM1-207ENST00000403444 RNF17Q9BXT8 1623 aaKnown RBP9.4□□□□□ -0.91
CEACAM1-207ENST00000403444 KIAA1107Q9UPP5 1409 aa9.4□□□□□ -0.91
CEACAM1-207ENST00000403444 MROH1Q8NDA8 1641 aa9.39□□□□□ -0.91
CEACAM1-207ENST00000403444 FBLN2P98095 1184 aa9.39□□□□□ -0.91
CEACAM1-207ENST00000403444 VWDEQ8N2E2 1590 aa9.39□□□□□ -0.91
CEACAM1-207ENST00000403444 NEO1Q92859 1461 aa9.37□□□□□ -0.91
CEACAM1-207ENST00000403444 SYCP2Q9BX26 1530 aa9.37□□□□□ -0.91
CEACAM1-207ENST00000403444 ABCA6Q8N139 1617 aa9.36□□□□□ -0.91
CEACAM1-207ENST00000403444 DENND4BO75064 1496 aaPredicted RBP9.36□□□□□ -0.91
CEACAM1-207ENST00000403444 SALL2Q9Y467 1007 aaPredicted RBP9.36□□□□□ -0.91
CEACAM1-207ENST00000403444 DAPK1P53355 1430 aa9.35□□□□□ -0.91
CEACAM1-207ENST00000403444 ROCK1Q13464 1354 aa9.35□□□□□ -0.91
CEACAM1-207ENST00000403444 CCNB3Q8WWL7 1395 aa9.35□□□□□ -0.91
CEACAM1-207ENST00000403444 ABCC5O15440 1437 aa9.35□□□□□ -0.91
CEACAM1-207ENST00000403444 IQGAP3Q86VI3 1631 aa9.34□□□□□ -0.91
CEACAM1-207ENST00000403444 HECW2Q9P2P5 1572 aa9.34□□□□□ -0.91
CEACAM1-207ENST00000403444 PKNOX2Q96KN3 472 aa9.34□□□□□ -0.91
CEACAM1-207ENST00000403444 SENP3-EIF4A1A0A087X0R7 540 aa9.34□□□□□ -0.91
CEACAM1-207ENST00000403444 PLEKHH2Q8IVE3 1493 aa9.33□□□□□ -0.92
CEACAM1-207ENST00000403444 HFM1A2PYH4 1435 aa9.33□□□□□ -0.92
CEACAM1-207ENST00000403444 KCNH8Q96L42 1107 aa9.33□□□□□ -0.92
CEACAM1-207ENST00000403444 DIP2CQ9Y2E4 1556 aa9.32□□□□□ -0.92
CEACAM1-207ENST00000403444 DDX10Q13206 875 aaKnown RBP9.31□□□□□ -0.92
CEACAM1-207ENST00000403444 PRDM15P57071 1507 aaPredicted RBP9.31□□□□□ -0.92
CEACAM1-207ENST00000403444 ZC3H13Q5T200 1668 aaKnown RBP9.31□□□□□ -0.92
CEACAM1-207ENST00000403444 MTUS2Q5JR59 1369 aa9.31□□□□□ -0.92
CEACAM1-207ENST00000403444 RTEL1-TNFRSF6BF6WH68 1400 aa9.31□□□□□ -0.92
CEACAM1-207ENST00000403444 CCDC141Q6ZP82 1450 aa9.3□□□□□ -0.92
CEACAM1-207ENST00000403444 POLR3GLQ9BT43 218 aa9.3□□□□□ -0.92
CEACAM1-207ENST00000403444 ARHGAP5Q13017 1502 aa9.3□□□□□ -0.92
CEACAM1-207ENST00000403444 ARHGEF40Q8TER5 1519 aa9.3□□□□□ -0.92
CEACAM1-207ENST00000403444 POGZQ7Z3K3 1410 aa9.3□□□□□ -0.92
CEACAM1-207ENST00000403444 MLH3Q9UHC1 1453 aa9.29□□□□□ -0.92
CEACAM1-207ENST00000403444 TRIM52Q96A61 297 aa9.29□□□□□ -0.92
CEACAM1-207ENST00000403444 ATP7AQ04656 1500 aa9.29□□□□□ -0.92
CEACAM1-207ENST00000403444 FAM135AQ9P2D6 1515 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms