RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 CDK11AQ9UQ88 783 aaPredicted RBP20.39■□□□□ 0.85
PRAME-204ENST00000403441 SCAPERQ9BY12 1400 aa20.38■□□□□ 0.85
PRAME-204ENST00000403441 MYO5CQ9NQX4 1742 aa20.38■□□□□ 0.85
PRAME-204ENST00000403441 ARHGAP35Q9NRY4 1499 aa20.37■□□□□ 0.85
PRAME-204ENST00000403441 KIF14Q15058 1648 aa20.35■□□□□ 0.85
PRAME-204ENST00000403441 EFCAB2Q5VUJ9 269 aa20.34■□□□□ 0.85
PRAME-204ENST00000403441 FBXO41Q8TF61 875 aa20.34■□□□□ 0.85
PRAME-204ENST00000403441 SIGLEC1Q9BZZ2 1709 aa20.33■□□□□ 0.85
PRAME-204ENST00000403441 CLIP1P30622 1438 aa20.33■□□□□ 0.84
PRAME-204ENST00000403441 FER1L4A9Z1Z3 1794 aa20.31■□□□□ 0.84
PRAME-204ENST00000403441 TROQ12816 1431 aaPredicted RBP20.31■□□□□ 0.84
PRAME-204ENST00000403441 PLPPR3Q6T4P5 718 aa20.31■□□□□ 0.84
PRAME-204ENST00000403441 C9orf84Q5VXU9 1444 aa20.3■□□□□ 0.84
PRAME-204ENST00000403441 MLECQ14165 292 aa20.3■□□□□ 0.84
PRAME-204ENST00000403441 ARHGAP5Q13017 1502 aa20.3■□□□□ 0.84
PRAME-204ENST00000403441 ATP10AO60312 1499 aa20.3■□□□□ 0.84
PRAME-204ENST00000403441 ZNF518AQ6AHZ1 1483 aa20.3■□□□□ 0.84
PRAME-204ENST00000403441 HSPA2P54652 639 aa20.25■□□□□ 0.83
PRAME-204ENST00000403441 ARHGEF12Q9NZN5 1544 aa20.25■□□□□ 0.83
PRAME-204ENST00000403441 KDM5CP41229 1560 aa20.24■□□□□ 0.83
PRAME-204ENST00000403441 LRRIQ1Q96JM4 1722 aa20.23■□□□□ 0.83
PRAME-204ENST00000403441 CCDC18Q5T9S5 1454 aa20.22■□□□□ 0.83
PRAME-204ENST00000403441 MYT1LQ9UL68 1186 aa20.21■□□□□ 0.83
PRAME-204ENST00000403441 CASKIN1Q8WXD9 1431 aa20.19■□□□□ 0.82
PRAME-204ENST00000403441 AFAP1Q8N556 730 aa20.19■□□□□ 0.82
PRAME-204ENST00000403441 PREX2Q70Z35 1606 aa20.18■□□□□ 0.82
PRAME-204ENST00000403441 PREX1Q8TCU6 1659 aa20.18■□□□□ 0.82
PRAME-204ENST00000403441 DIP2CQ9Y2E4 1556 aa20.17■□□□□ 0.82
PRAME-204ENST00000403441 CDC42BPBQ9Y5S2 1711 aa20.17■□□□□ 0.82
PRAME-204ENST00000403441 REREQ9P2R6 1566 aa20.16■□□□□ 0.82
PRAME-204ENST00000403441 MLH3Q9UHC1 1453 aa20.15■□□□□ 0.82
PRAME-204ENST00000403441 ABCC1P33527 1531 aa20.15■□□□□ 0.82
PRAME-204ENST00000403441 ABCA6Q8N139 1617 aa20.13■□□□□ 0.81
PRAME-204ENST00000403441 FYCO1Q9BQS8 1478 aa20.13■□□□□ 0.81
PRAME-204ENST00000403441 ITSN2Q9NZM3 1697 aa20.12■□□□□ 0.81
PRAME-204ENST00000403441 CEBPAP49715 358 aaPredicted RBP20.11■□□□□ 0.81
PRAME-204ENST00000403441 UHRF1BP1Q6BDS2 1440 aa20.1■□□□□ 0.81
PRAME-204ENST00000403441 TRAPPC8Q9Y2L5 1435 aa20.1■□□□□ 0.81
PRAME-204ENST00000403441 AGLP35573 1532 aa20.09■□□□□ 0.81
PRAME-204ENST00000403441 CDC42BPAQ5VT25 1732 aa20.08■□□□□ 0.81
PRAME-204ENST00000403441 ESF1Q9H501 851 aaKnown RBP20.08■□□□□ 0.81
PRAME-204ENST00000403441 CERKQ8TCT0 537 aa20.07■□□□□ 0.8
PRAME-204ENST00000403441 DMRT2Q9Y5R5 561 aa20.04■□□□□ 0.8
PRAME-204ENST00000403441 C3P01024 1663 aa20.03■□□□□ 0.8
PRAME-204ENST00000403441 KIDINS220Q9ULH0 1771 aa20.03■□□□□ 0.8
PRAME-204ENST00000403441 SETD1BQ9UPS6 1966 aaKnown RBP20.03■□□□□ 0.8
PRAME-204ENST00000403441 CNTLNQ9NXG0 1405 aa20.02■□□□□ 0.8
PRAME-204ENST00000403441 ZNF777Q9ULD5 760 aaPredicted RBP20.02■□□□□ 0.8
PRAME-204ENST00000403441 SAMD9LQ8IVG5 1584 aa20.02■□□□□ 0.8
PRAME-204ENST00000403441 SYCP2Q9BX26 1530 aa20.02■□□□□ 0.79
PRAME-204ENST00000403441 STRCQ7RTU9 1775 aa20■□□□□ 0.79
PRAME-204ENST00000403441 GPATCH8Q9UKJ3 1502 aaKnown RBP19.99■□□□□ 0.79
PRAME-204ENST00000403441 SPAG9O60271 1321 aaKnown RBP19.98■□□□□ 0.79
PRAME-204ENST00000403441 PLEKHH2Q8IVE3 1493 aa19.98■□□□□ 0.79
PRAME-204ENST00000403441 CCNB3Q8WWL7 1395 aa19.95■□□□□ 0.79
PRAME-204ENST00000403441 CFDP1Q9UEE9 299 aaPredicted RBP19.95■□□□□ 0.78
PRAME-204ENST00000403441 ATP7AQ04656 1500 aa19.95■□□□□ 0.78
PRAME-204ENST00000403441 MTUS2Q5JR59 1369 aa19.95■□□□□ 0.78
PRAME-204ENST00000403441 KIAA1107Q9UPP5 1409 aa19.94■□□□□ 0.78
PRAME-204ENST00000403441 MROH2AA6NES4 1674 aa19.94■□□□□ 0.78
PRAME-204ENST00000403441 PTPRTO14522 1441 aa19.93■□□□□ 0.78
PRAME-204ENST00000403441 HNRNPMP52272 730 aaKnown RBP eCLIP19.93■□□□□ 0.783e-11■□□□□ 9.5
PRAME-204ENST00000403441 INO80Q9ULG1 1556 aaPredicted RBP19.92■□□□□ 0.78
PRAME-204ENST00000403441 NPATQ14207 1427 aa19.92■□□□□ 0.78
PRAME-204ENST00000403441 SUPT6HQ7KZ85 1726 aaKnown RBP19.91■□□□□ 0.78
PRAME-204ENST00000403441 PLXNC1O60486 1568 aa19.9■□□□□ 0.78
PRAME-204ENST00000403441 A2MP01023 1474 aa19.89■□□□□ 0.77
PRAME-204ENST00000403441 NCOA1Q15788 1441 aa19.89■□□□□ 0.77
PRAME-204ENST00000403441 ZMYM3Q14202 1370 aa19.87■□□□□ 0.77
PRAME-204ENST00000403441 EHBP1L1Q8N3D4 1523 aa19.86■□□□□ 0.77
PRAME-204ENST00000403441 CLTCQ00610 1675 aaKnown RBP19.85■□□□□ 0.77
PRAME-204ENST00000403441 TIAM1Q13009 1591 aa19.85■□□□□ 0.77
PRAME-204ENST00000403441 ADGBQ8N7X0 1667 aa19.84■□□□□ 0.77
PRAME-204ENST00000403441 CAMSAP1Q5T5Y3 1602 aa19.84■□□□□ 0.77
PRAME-204ENST00000403441 MYO3AQ8NEV4 1616 aa19.82■□□□□ 0.76
PRAME-204ENST00000403441 GGT6Q6P531 493 aa19.81■□□□□ 0.76
PRAME-204ENST00000403441 ZNF142P52746 1687 aaPredicted RBP19.81■□□□□ 0.76
PRAME-204ENST00000403441 CEP162Q5TB80 1403 aa19.8■□□□□ 0.76
PRAME-204ENST00000403441 LTBP4Q8N2S1 1624 aa19.8■□□□□ 0.76
PRAME-204ENST00000403441 IQSEC2Q5JU85 1478 aa19.79■□□□□ 0.76
PRAME-204ENST00000403441 ZNF644Q9H582 1327 aaPredicted RBP19.79■□□□□ 0.76
PRAME-204ENST00000403441 PPP6R1Q9UPN7 881 aa19.79■□□□□ 0.76
PRAME-204ENST00000403441 PTPRKQ15262 1439 aa19.78■□□□□ 0.76
PRAME-204ENST00000403441 MBD5Q9P267 1494 aa19.78■□□□□ 0.76
PRAME-204ENST00000403441 CEP170BQ9Y4F5 1589 aaPredicted RBP19.78■□□□□ 0.76
PRAME-204ENST00000403441 RTEL1-TNFRSF6BF6WH68 1400 aa19.77■□□□□ 0.76
PRAME-204ENST00000403441 PLA2R1Q13018 1463 aa19.76■□□□□ 0.75
PRAME-204ENST00000403441 PKD2Q13563 968 aa19.74■□□□□ 0.75
PRAME-204ENST00000403441 NCKAP5LQ9HCH0 1330 aa19.74■□□□□ 0.75
PRAME-204ENST00000403441 CCDC141Q6ZP82 1450 aa19.73■□□□□ 0.75
PRAME-204ENST00000403441 DISP3Q9P2K9 1392 aa19.73■□□□□ 0.75
PRAME-204ENST00000403441 DHX29Q7Z478 1369 aaKnown RBP19.72■□□□□ 0.75
PRAME-204ENST00000403441 CAMSAP2Q08AD1 1489 aa19.72■□□□□ 0.75
PRAME-204ENST00000403441 NCOA2Q15596 1464 aa19.72■□□□□ 0.75
PRAME-204ENST00000403441 TCOF1Q13428 1488 aaKnown RBP19.71■□□□□ 0.75
PRAME-204ENST00000403441 FAM135AQ9P2D6 1515 aa19.7■□□□□ 0.74
PRAME-204ENST00000403441 A2ML1A8K2U0 1454 aa19.69■□□□□ 0.74
PRAME-204ENST00000403441 KDM5DQ9BY66 1539 aa19.69■□□□□ 0.74
PRAME-204ENST00000403441 ZNF335Q9H4Z2 1342 aaPredicted RBP19.69■□□□□ 0.74
PRAME-204ENST00000403441 RSPH4AQ5TD94 716 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms