RNA–Protein interactions for RNA: ENST00000403231.5

KIF3A-203, Transcript of kinesin family member 3A, humanhuman

TSL 2 BASIC

Gene KIF3A, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-203ENST00000403231 CCNB3Q8WWL7 1395 aa7.17□□□□□ -1.26
KIF3A-203ENST00000403231 MAP3K1Q13233 1512 aa7.17□□□□□ -1.26
KIF3A-203ENST00000403231 NUP160Q12769 1436 aa7.16□□□□□ -1.26
KIF3A-203ENST00000403231 RRBP1Q9P2E9 1410 aaKnown RBP7.16□□□□□ -1.26
KIF3A-203ENST00000403231 SPDYE1Q8NFV5 336 aaPredicted RBP7.16□□□□□ -1.26
KIF3A-203ENST00000403231 PLB1Q6P1J6 1458 aa7.16□□□□□ -1.26
KIF3A-203ENST00000403231 ERCC6L2Q5T890 1561 aa7.16□□□□□ -1.26
KIF3A-203ENST00000403231 EPRSP07814 1512 aaKnown RBP7.15□□□□□ -1.26
KIF3A-203ENST00000403231 PRG4Q92954 1404 aaPredicted RBP7.14□□□□□ -1.27
KIF3A-203ENST00000403231 RAPGEF6Q8TEU7 1601 aa7.13□□□□□ -1.27
KIF3A-203ENST00000403231 NUP153P49790 1475 aaKnown RBP7.13□□□□□ -1.27
KIF3A-203ENST00000403231 NCOA2Q15596 1464 aa7.13□□□□□ -1.27
KIF3A-203ENST00000403231 HECW1Q76N89 1606 aa7.13□□□□□ -1.27
KIF3A-203ENST00000403231 ZEB1P37275 1124 aaPredicted RBP7.13□□□□□ -1.27
KIF3A-203ENST00000403231 RTN4Q9NQC3 1192 aaKnown RBP7.12□□□□□ -1.27
KIF3A-203ENST00000403231 CHIC2Q9UKJ5 165 aa7.12□□□□□ -1.27
KIF3A-203ENST00000403231 SUPT6HQ7KZ85 1726 aaKnown RBP7.12□□□□□ -1.27
KIF3A-203ENST00000403231 C19orf67A6NJJ6 358 aa7.12□□□□□ -1.27
KIF3A-203ENST00000403231 ZNF644Q9H582 1327 aaPredicted RBP7.11□□□□□ -1.27
KIF3A-203ENST00000403231 PTPRKQ15262 1439 aa7.11□□□□□ -1.27
KIF3A-203ENST00000403231 CARMIL2Q6F5E8 1435 aa7.11□□□□□ -1.27
KIF3A-203ENST00000403231 FGD6Q6ZV73 1430 aa7.1□□□□□ -1.27
KIF3A-203ENST00000403231 SSUH2Q9Y2M2 353 aa7.1□□□□□ -1.27
KIF3A-203ENST00000403231 RAB3GAP2Q9H2M9 1393 aa7.09□□□□□ -1.27
KIF3A-203ENST00000403231 PTPRGP23470 1445 aa7.09□□□□□ -1.28
KIF3A-203ENST00000403231 CCDC18Q5T9S5 1454 aa7.08□□□□□ -1.28
KIF3A-203ENST00000403231 KIF14Q15058 1648 aa7.08□□□□□ -1.28
KIF3A-203ENST00000403231 DHX57Q6P158 1386 aaKnown RBP7.08□□□□□ -1.28
KIF3A-203ENST00000403231 EHBP1L1Q8N3D4 1523 aa7.08□□□□□ -1.28
KIF3A-203ENST00000403231 PRKAR2AP13861 404 aaKnown RBP7.08□□□□□ -1.28
KIF3A-203ENST00000403231 RRP7BPQ9NSQ0 103 aa7.08□□□□□ -1.28
KIF3A-203ENST00000403231 ZNF777Q9ULD5 760 aaPredicted RBP7.08□□□□□ -1.28
KIF3A-203ENST00000403231 MYOM3Q5VTT5 1437 aa7.08□□□□□ -1.28
KIF3A-203ENST00000403231 PTPN23Q9H3S7 1636 aa7.07□□□□□ -1.28
KIF3A-203ENST00000403231 ATP10BO94823 1461 aa7.07□□□□□ -1.28
KIF3A-203ENST00000403231 ABCA8O94911 1581 aa7.07□□□□□ -1.28
KIF3A-203ENST00000403231 SHROOM2Q13796 1616 aa7.06□□□□□ -1.28
KIF3A-203ENST00000403231 CLCN6P51797 869 aa7.06□□□□□ -1.28
KIF3A-203ENST00000403231 EVX2Q03828 476 aa7.06□□□□□ -1.28
KIF3A-203ENST00000403231 ARHGEF11O15085 1522 aa7.06□□□□□ -1.28
KIF3A-203ENST00000403231 SETD5Q9C0A6 1442 aa7.06□□□□□ -1.28
KIF3A-203ENST00000403231 KCNH8Q96L42 1107 aa7.06□□□□□ -1.28
KIF3A-203ENST00000403231 PLEKHD1A6NEE1 506 aa7.05□□□□□ -1.28
KIF3A-203ENST00000403231 SIN3AQ96ST3 1273 aa7.05□□□□□ -1.28
KIF3A-203ENST00000403231 CDK11AQ9UQ88 783 aaPredicted RBP7.05□□□□□ -1.28
KIF3A-203ENST00000403231 CLASP1Q7Z460 1538 aa7.04□□□□□ -1.28
KIF3A-203ENST00000403231 KDM6BO15054 1643 aa7.04□□□□□ -1.28
KIF3A-203ENST00000403231 NEUROD1Q13562 356 aa7.03□□□□□ -1.28
KIF3A-203ENST00000403231 CDC42BPAQ5VT25 1732 aa7.03□□□□□ -1.28
KIF3A-203ENST00000403231 TROQ12816 1431 aaPredicted RBP7.03□□□□□ -1.28
KIF3A-203ENST00000403231 ZNF692Q9BU19 519 aaPredicted RBP7.02□□□□□ -1.29
KIF3A-203ENST00000403231 CFDP1Q9UEE9 299 aaPredicted RBP7.02□□□□□ -1.29
KIF3A-203ENST00000403231 UACAQ9BZF9 1416 aa7.02□□□□□ -1.29
KIF3A-203ENST00000403231 GPATCH8Q9UKJ3 1502 aaKnown RBP7.01□□□□□ -1.29
KIF3A-203ENST00000403231 HNRNPMP52272 730 aaKnown RBP eCLIP7.01□□□□□ -1.29
KIF3A-203ENST00000403231 NAIPQ13075 1403 aa7.01□□□□□ -1.29
KIF3A-203ENST00000403231 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.01□□□□□ -1.29
KIF3A-203ENST00000403231 GABBR2O75899 941 aa7.01□□□□□ -1.29
KIF3A-203ENST00000403231 MAPKBP1O60336 1514 aa7□□□□□ -1.29
KIF3A-203ENST00000403231 CDC42BPBQ9Y5S2 1711 aa7□□□□□ -1.29
KIF3A-203ENST00000403231 CLEC11AQ9Y240 323 aa7□□□□□ -1.29
KIF3A-203ENST00000403231 TCOF1Q13428 1488 aaKnown RBP7□□□□□ -1.29
KIF3A-203ENST00000403231 MKRN4PQ13434 485 aaPredicted RBP6.99□□□□□ -1.29
KIF3A-203ENST00000403231 TRIM52Q96A61 297 aa6.99□□□□□ -1.29
KIF3A-203ENST00000403231 ABCC5O15440 1437 aa6.99□□□□□ -1.29
KIF3A-203ENST00000403231 AMER1Q5JTC6 1135 aaPredicted RBP6.99□□□□□ -1.29
KIF3A-203ENST00000403231 ZCCHC11Q5TAX3 1644 aaKnown RBP6.99□□□□□ -1.29
KIF3A-203ENST00000403231 ADCY10Q96PN6 1610 aa6.99□□□□□ -1.29
KIF3A-203ENST00000403231 CAMSAP2Q08AD1 1489 aa6.98□□□□□ -1.29
KIF3A-203ENST00000403231 ABCC10Q5T3U5 1492 aa6.98□□□□□ -1.29
KIF3A-203ENST00000403231 MIA2Q96PC5 1412 aa6.98□□□□□ -1.29
KIF3A-203ENST00000403231 HFM1A2PYH4 1435 aa6.98□□□□□ -1.29
KIF3A-203ENST00000403231 DAPK1P53355 1430 aa6.98□□□□□ -1.29
KIF3A-203ENST00000403231 LHX8Q68G74 356 aa6.98□□□□□ -1.29
KIF3A-203ENST00000403231 ABCC2Q92887 1545 aa6.97□□□□□ -1.29
KIF3A-203ENST00000403231 TTC37Q6PGP7 1564 aa6.97□□□□□ -1.29
KIF3A-203ENST00000403231 ITSN2Q9NZM3 1697 aa6.97□□□□□ -1.29
KIF3A-203ENST00000403231 DNMT1P26358 1616 aaKnown RBP6.97□□□□□ -1.29
KIF3A-203ENST00000403231 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.95□□□□□ -1.3
KIF3A-203ENST00000403231 ZNF316A6NFI3 1004 aaPredicted RBP6.95□□□□□ -1.3
KIF3A-203ENST00000403231 GCC2Q8IWJ2 1684 aa6.95□□□□□ -1.3
KIF3A-203ENST00000403231 HIRIP3Q9BW71 556 aaPredicted RBP6.95□□□□□ -1.3
KIF3A-203ENST00000403231 DENND4BO75064 1496 aaPredicted RBP6.94□□□□□ -1.3
KIF3A-203ENST00000403231 PRR29P0C7W0 189 aa6.94□□□□□ -1.3
KIF3A-203ENST00000403231 SAMD9LQ8IVG5 1584 aa6.94□□□□□ -1.3
KIF3A-203ENST00000403231 CYB5RLQ6IPT4 315 aa6.93□□□□□ -1.3
KIF3A-203ENST00000403231 MPHOSPH9Q99550 1183 aa6.93□□□□□ -1.3
KIF3A-203ENST00000403231 CLSPNQ9HAW4 1339 aa6.93□□□□□ -1.3
KIF3A-203ENST00000403231 MYO5CQ9NQX4 1742 aa6.93□□□□□ -1.3
KIF3A-203ENST00000403231 KDM5BQ9UGL1 1544 aa6.93□□□□□ -1.3
KIF3A-203ENST00000403231 CROCC2H7BZ55 1655 aa6.93□□□□□ -1.3
KIF3A-203ENST00000403231 DIEXFQ68CQ4 756 aaKnown RBP6.93□□□□□ -1.3
KIF3A-203ENST00000403231 AKNAQ7Z591 1439 aa6.93□□□□□ -1.3
KIF3A-203ENST00000403231 PREX2Q70Z35 1606 aa6.93□□□□□ -1.3
KIF3A-203ENST00000403231 ARHGAP5Q13017 1502 aa6.93□□□□□ -1.3
KIF3A-203ENST00000403231 NCOA1Q15788 1441 aa6.92□□□□□ -1.3
KIF3A-203ENST00000403231 ADGBQ8N7X0 1667 aa6.92□□□□□ -1.3
KIF3A-203ENST00000403231 TSPY4P0CV99 314 aa6.91□□□□□ -1.3
KIF3A-203ENST00000403231 TSPY10P0CW01 314 aa6.91□□□□□ -1.3
KIF3A-203ENST00000403231 ARHGEF12Q9NZN5 1544 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms