RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 WASHC2AQ641Q2 1341 aa10.56□□□□□ -0.72
HDAC9-201ENST00000401921 PKD2Q13563 968 aa10.56□□□□□ -0.72
HDAC9-201ENST00000401921 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.55□□□□□ -0.72
HDAC9-201ENST00000401921 IQGAP2Q13576 1575 aa10.55□□□□□ -0.72
HDAC9-201ENST00000401921 MRC2Q9UBG0 1479 aa10.55□□□□□ -0.72
HDAC9-201ENST00000401921 ABCA5Q8WWZ7 1642 aa10.54□□□□□ -0.72
HDAC9-201ENST00000401921 MYT1LQ9UL68 1186 aa10.53□□□□□ -0.72
HDAC9-201ENST00000401921 NBPF8Q3BBV2 869 aa10.53□□□□□ -0.72
HDAC9-201ENST00000401921 RGL3Q3MIN7 710 aa10.52□□□□□ -0.72
HDAC9-201ENST00000401921 HECW1Q76N89 1606 aa10.52□□□□□ -0.72
HDAC9-201ENST00000401921 PRG4Q92954 1404 aaPredicted RBP10.52□□□□□ -0.73
HDAC9-201ENST00000401921 MAGI3Q5TCQ9 1506 aa10.51□□□□□ -0.73
HDAC9-201ENST00000401921 CCDC184Q52MB2 194 aa10.51□□□□□ -0.73
HDAC9-201ENST00000401921 UGGT2Q9NYU1 1516 aa10.51□□□□□ -0.73
HDAC9-201ENST00000401921 C11orf95C9JLR9 678 aaPredicted RBP10.51□□□□□ -0.73
HDAC9-201ENST00000401921 HNRNPMP52272 730 aaKnown RBP eCLIP10.51□□□□□ -0.73
HDAC9-201ENST00000401921 SAMD9Q5K651 1589 aa10.51□□□□□ -0.73
HDAC9-201ENST00000401921 THOC2Q8NI27 1593 aaKnown RBP10.51□□□□□ -0.73
HDAC9-201ENST00000401921 SALL2Q9Y467 1007 aaPredicted RBP10.5□□□□□ -0.73
HDAC9-201ENST00000401921 CARD11Q9BXL7 1154 aa10.5□□□□□ -0.73
HDAC9-201ENST00000401921 MIA2Q96PC5 1412 aa10.5□□□□□ -0.73
HDAC9-201ENST00000401921 CARMIL2Q6F5E8 1435 aa10.5□□□□□ -0.73
HDAC9-201ENST00000401921 PRKRIP1Q9H875 184 aaPredicted RBP10.49□□□□□ -0.73
HDAC9-201ENST00000401921 NUP155O75694 1391 aa10.49□□□□□ -0.73
HDAC9-201ENST00000401921 IFT140Q96RY7 1462 aa10.49□□□□□ -0.73
HDAC9-201ENST00000401921 DCAF11Q8TEB1 546 aa10.48□□□□□ -0.73
HDAC9-201ENST00000401921 DAPK1P53355 1430 aa10.48□□□□□ -0.73
HDAC9-201ENST00000401921 TMC1Q8TDI8 760 aa10.48□□□□□ -0.73
HDAC9-201ENST00000401921 KIAA0586Q9BVV6 1533 aa10.47□□□□□ -0.73
HDAC9-201ENST00000401921 TARBP1Q13395 1621 aaKnown RBP10.47□□□□□ -0.73
HDAC9-201ENST00000401921 ANKRD30AQ9BXX3 1397 aa10.47□□□□□ -0.73
HDAC9-201ENST00000401921 ABCC5O15440 1437 aa10.46□□□□□ -0.73
HDAC9-201ENST00000401921 PLB1Q6P1J6 1458 aa10.46□□□□□ -0.73
HDAC9-201ENST00000401921 CCDC7Q96M83 1385 aa10.46□□□□□ -0.73
HDAC9-201ENST00000401921 KIF7Q2M1P5 1343 aa10.46□□□□□ -0.74
HDAC9-201ENST00000401921 RBM19Q9Y4C8 960 aaKnown RBP10.45□□□□□ -0.74
HDAC9-201ENST00000401921 ADAMTS12P58397 1594 aa10.44□□□□□ -0.74
HDAC9-201ENST00000401921 PBRM1Q86U86 1689 aa10.44□□□□□ -0.74
HDAC9-201ENST00000401921 ANKRD30BQ9BXX2 1392 aa10.44□□□□□ -0.74
HDAC9-201ENST00000401921 LRRIQ1Q96JM4 1722 aa10.44□□□□□ -0.74
HDAC9-201ENST00000401921 GRIN2AQ12879 1464 aa10.44□□□□□ -0.74
HDAC9-201ENST00000401921 B4GALNT3Q6L9W6 998 aa10.43□□□□□ -0.74
HDAC9-201ENST00000401921 TROQ12816 1431 aaPredicted RBP10.43□□□□□ -0.74
HDAC9-201ENST00000401921 CNTLNQ9NXG0 1405 aa10.43□□□□□ -0.74
HDAC9-201ENST00000401921 KDM6BO15054 1643 aa10.43□□□□□ -0.74
HDAC9-201ENST00000401921 WDR62O43379 1518 aa10.42□□□□□ -0.74
HDAC9-201ENST00000401921 NUP153P49790 1475 aaKnown RBP10.42□□□□□ -0.74
HDAC9-201ENST00000401921 TCOF1Q13428 1488 aaKnown RBP10.42□□□□□ -0.74
HDAC9-201ENST00000401921 USP47Q96K76 1375 aa10.41□□□□□ -0.74
HDAC9-201ENST00000401921 ST20-MTHFSA0A0A6YYL1 179 aa10.41□□□□□ -0.74
HDAC9-201ENST00000401921 ANKRD50Q9ULJ7 1429 aa10.4□□□□□ -0.74
HDAC9-201ENST00000401921 ROCK1Q13464 1354 aa10.4□□□□□ -0.74
HDAC9-201ENST00000401921 DISP1Q96F81 1524 aa10.4□□□□□ -0.75
HDAC9-201ENST00000401921 PTPRGP23470 1445 aa10.39□□□□□ -0.75
HDAC9-201ENST00000401921 PPP4R2Q9NY27 417 aa10.39□□□□□ -0.75
HDAC9-201ENST00000401921 NCOA1Q15788 1441 aa10.38□□□□□ -0.75
HDAC9-201ENST00000401921 CAMSAP2Q08AD1 1489 aa10.38□□□□□ -0.75
HDAC9-201ENST00000401921 AKNAQ7Z591 1439 aa10.38□□□□□ -0.75
HDAC9-201ENST00000401921 RPRD2Q5VT52 1461 aaKnown RBP10.38□□□□□ -0.75
HDAC9-201ENST00000401921 KIAA0556O60303 1618 aa10.38□□□□□ -0.75
HDAC9-201ENST00000401921 ANO8Q9HCE9 1232 aaPredicted RBP10.38□□□□□ -0.75
HDAC9-201ENST00000401921 RAPGEF6Q8TEU7 1601 aa10.37□□□□□ -0.75
HDAC9-201ENST00000401921 ARHGEF11O15085 1522 aa10.37□□□□□ -0.75
HDAC9-201ENST00000401921 CCDC136Q96JN2 1154 aa10.37□□□□□ -0.75
HDAC9-201ENST00000401921 KIF15Q9NS87 1388 aa10.36□□□□□ -0.75
HDAC9-201ENST00000401921 GPATCH8Q9UKJ3 1502 aaKnown RBP10.36□□□□□ -0.75
HDAC9-201ENST00000401921 ADRA2BP18089 450 aa10.36□□□□□ -0.75
HDAC9-201ENST00000401921 KIAA1107Q9UPP5 1409 aa10.36□□□□□ -0.75
HDAC9-201ENST00000401921 SYNJ2O15056 1496 aa10.35□□□□□ -0.75
HDAC9-201ENST00000401921 ROCK2O75116 1388 aaKnown RBP10.35□□□□□ -0.75
HDAC9-201ENST00000401921 CC2D1BQ5T0F9 858 aaKnown RBP10.35□□□□□ -0.75
HDAC9-201ENST00000401921 DENND4BO75064 1496 aaPredicted RBP10.35□□□□□ -0.75
HDAC9-201ENST00000401921 EIF4G3O43432 1585 aaKnown RBP10.34□□□□□ -0.75
HDAC9-201ENST00000401921 ZBED9Q6R2W3 1325 aa10.34□□□□□ -0.75
HDAC9-201ENST00000401921 C9orf84Q5VXU9 1444 aa10.34□□□□□ -0.75
HDAC9-201ENST00000401921 MAGI1Q96QZ7 1491 aaPredicted RBP10.33□□□□□ -0.76
HDAC9-201ENST00000401921 GCC2Q8IWJ2 1684 aa10.33□□□□□ -0.76
HDAC9-201ENST00000401921 DNMT1P26358 1616 aaKnown RBP10.31□□□□□ -0.76
HDAC9-201ENST00000401921 NBPF1Q3BBV0 1214 aa10.31□□□□□ -0.76
HDAC9-201ENST00000401921 KDM5BQ9UGL1 1544 aa10.3□□□□□ -0.76
HDAC9-201ENST00000401921 PLPPR3Q6T4P5 718 aa10.3□□□□□ -0.76
HDAC9-201ENST00000401921 ATP10BO94823 1461 aa10.3□□□□□ -0.76
HDAC9-201ENST00000401921 CHGAP10645 457 aaKnown RBP10.3□□□□□ -0.76
HDAC9-201ENST00000401921 PZPP20742 1482 aa10.29□□□□□ -0.76
HDAC9-201ENST00000401921 KIF14Q15058 1648 aa10.29□□□□□ -0.76
HDAC9-201ENST00000401921 NUDCQ9Y266 331 aa10.29□□□□□ -0.76
HDAC9-201ENST00000401921 CCDC144AA2RUR9 1427 aa10.29□□□□□ -0.76
HDAC9-201ENST00000401921 RSPH4AQ5TD94 716 aa10.29□□□□□ -0.76
HDAC9-201ENST00000401921 TEX14Q8IWB6 1497 aa10.28□□□□□ -0.76
HDAC9-201ENST00000401921 CEP170Q5SW79 1584 aa10.28□□□□□ -0.76
HDAC9-201ENST00000401921 EFCAB2Q5VUJ9 269 aa10.27□□□□□ -0.76
HDAC9-201ENST00000401921 ERICH6BQ5W0A0 696 aa10.27□□□□□ -0.77
HDAC9-201ENST00000401921 NPM2Q86SE8 214 aaKnown RBP10.26□□□□□ -0.77
HDAC9-201ENST00000401921 SENP3Q9H4L4 574 aaPredicted RBP10.26□□□□□ -0.77
HDAC9-201ENST00000401921 RALBP1Q15311 655 aa10.26□□□□□ -0.77
HDAC9-201ENST00000401921 TMF1P82094 1093 aa10.25□□□□□ -0.77
HDAC9-201ENST00000401921 PNISRQ8TF01 805 aaKnown RBP10.25□□□□□ -0.77
HDAC9-201ENST00000401921 PANK3Q9H999 370 aa10.25□□□□□ -0.77
HDAC9-201ENST00000401921 MYBBP1AQ9BQG0 1328 aaKnown RBP10.25□□□□□ -0.77
HDAC9-201ENST00000401921 KTN1Q86UP2 1357 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms