RNA–Protein interactions for RNA: ENST00000400566.5

SAMSN1-203, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMSN1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-203ENST00000400566 ERCC6L2Q5T890 1561 aa8.62□□□□□ -1.03
SAMSN1-203ENST00000400566 MAP3K1Q13233 1512 aa8.62□□□□□ -1.03
SAMSN1-203ENST00000400566 ZBTB12Q9Y330 459 aaPredicted RBP8.61□□□□□ -1.03
SAMSN1-203ENST00000400566 RAPGEF6Q8TEU7 1601 aa8.61□□□□□ -1.03
SAMSN1-203ENST00000400566 CFAP43Q8NDM7 1665 aa8.6□□□□□ -1.03
SAMSN1-203ENST00000400566 HECW1Q76N89 1606 aa8.6□□□□□ -1.03
SAMSN1-203ENST00000400566 SPNS2Q8IVW8 549 aa8.6□□□□□ -1.03
SAMSN1-203ENST00000400566 LRRIQ1Q96JM4 1722 aa8.59□□□□□ -1.03
SAMSN1-203ENST00000400566 ABCA8O94911 1581 aa8.59□□□□□ -1.03
SAMSN1-203ENST00000400566 TIAM1Q13009 1591 aa8.59□□□□□ -1.03
SAMSN1-203ENST00000400566 PTPRGP23470 1445 aa8.59□□□□□ -1.03
SAMSN1-203ENST00000400566 MKRN4PQ13434 485 aaPredicted RBP8.59□□□□□ -1.03
SAMSN1-203ENST00000400566 CCDC18Q5T9S5 1454 aa8.58□□□□□ -1.04
SAMSN1-203ENST00000400566 PLB1Q6P1J6 1458 aa8.58□□□□□ -1.04
SAMSN1-203ENST00000400566 NUP153P49790 1475 aaKnown RBP8.58□□□□□ -1.04
SAMSN1-203ENST00000400566 EPRSP07814 1512 aaKnown RBP8.56□□□□□ -1.04
SAMSN1-203ENST00000400566 UACAQ9BZF9 1416 aa8.55□□□□□ -1.04
SAMSN1-203ENST00000400566 LRRC9Q6ZRR7 1453 aa8.55□□□□□ -1.04
SAMSN1-203ENST00000400566 TTBK1Q5TCY1 1321 aaPredicted RBP8.55□□□□□ -1.04
SAMSN1-203ENST00000400566 ARHGEF11O15085 1522 aa8.54□□□□□ -1.04
SAMSN1-203ENST00000400566 ABCC2Q92887 1545 aa8.54□□□□□ -1.04
SAMSN1-203ENST00000400566 ATP1B4Q9UN42 357 aaPredicted RBP8.54□□□□□ -1.04
SAMSN1-203ENST00000400566 UHRF1BP1LA0JNW5 1464 aa8.54□□□□□ -1.04
SAMSN1-203ENST00000400566 CDK13Q14004 1512 aaKnown RBP8.53□□□□□ -1.04
SAMSN1-203ENST00000400566 KANK4Q5T7N3 995 aaPredicted RBP8.53□□□□□ -1.04
SAMSN1-203ENST00000400566 PPARGC1BQ86YN6 1023 aaKnown RBP8.52□□□□□ -1.05
SAMSN1-203ENST00000400566 EHBP1L1Q8N3D4 1523 aa8.52□□□□□ -1.05
SAMSN1-203ENST00000400566 ATP10BO94823 1461 aa8.51□□□□□ -1.05
SAMSN1-203ENST00000400566 MAGI3Q5TCQ9 1506 aa8.51□□□□□ -1.05
SAMSN1-203ENST00000400566 RIMBP3CA6NJZ7 1639 aa8.51□□□□□ -1.05
SAMSN1-203ENST00000400566 RIMBP3BA6NNM3 1639 aa8.51□□□□□ -1.05
SAMSN1-203ENST00000400566 RIMBP3Q9UFD9 1639 aa8.51□□□□□ -1.05
SAMSN1-203ENST00000400566 MTUS2Q5JR59 1369 aa8.51□□□□□ -1.05
SAMSN1-203ENST00000400566 ADCY10Q96PN6 1610 aa8.5□□□□□ -1.05
SAMSN1-203ENST00000400566 KDM5BQ9UGL1 1544 aa8.5□□□□□ -1.05
SAMSN1-203ENST00000400566 SUPT6HQ7KZ85 1726 aaKnown RBP8.49□□□□□ -1.05
SAMSN1-203ENST00000400566 CDK11AQ9UQ88 783 aaPredicted RBP8.49□□□□□ -1.05
SAMSN1-203ENST00000400566 ZCCHC11Q5TAX3 1644 aaKnown RBP8.48□□□□□ -1.05
SAMSN1-203ENST00000400566 TROQ12816 1431 aaPredicted RBP8.48□□□□□ -1.05
SAMSN1-203ENST00000400566 ARID3CA6NKF2 412 aa8.47□□□□□ -1.05
SAMSN1-203ENST00000400566 TRIM26Q12899 539 aaPredicted RBP8.47□□□□□ -1.05
SAMSN1-203ENST00000400566 NCOA2Q15596 1464 aa8.46□□□□□ -1.05
SAMSN1-203ENST00000400566 PHLDB1Q86UU1 1377 aa8.45□□□□□ -1.06
SAMSN1-203ENST00000400566 PLEKHD1A6NEE1 506 aa8.45□□□□□ -1.06
SAMSN1-203ENST00000400566 RRBP1Q9P2E9 1410 aaKnown RBP8.44□□□□□ -1.06
SAMSN1-203ENST00000400566 KIF14Q15058 1648 aa8.44□□□□□ -1.06
SAMSN1-203ENST00000400566 CD44P16070 742 aaKnown RBP8.43□□□□□ -1.06
SAMSN1-203ENST00000400566 MYOM3Q5VTT5 1437 aa8.43□□□□□ -1.06
SAMSN1-203ENST00000400566 CYB5RLQ6IPT4 315 aa8.42□□□□□ -1.06
SAMSN1-203ENST00000400566 SCUBE2Q9NQ36 999 aa8.42□□□□□ -1.06
SAMSN1-203ENST00000400566 ABCC10Q5T3U5 1492 aa8.42□□□□□ -1.06
SAMSN1-203ENST00000400566 FKBP8Q14318 412 aa8.41□□□□□ -1.06
SAMSN1-203ENST00000400566 CCNB3Q8WWL7 1395 aa8.41□□□□□ -1.06
SAMSN1-203ENST00000400566 WDR7Q9Y4E6 1490 aa8.41□□□□□ -1.06
SAMSN1-203ENST00000400566 ITSN2Q9NZM3 1697 aa8.41□□□□□ -1.06
SAMSN1-203ENST00000400566 FGD6Q6ZV73 1430 aa8.41□□□□□ -1.06
SAMSN1-203ENST00000400566 PCGF6Q9BYE7 350 aa8.4□□□□□ -1.06
SAMSN1-203ENST00000400566 MAPKBP1O60336 1514 aa8.4□□□□□ -1.06
SAMSN1-203ENST00000400566 ASXL2Q76L83 1435 aa8.4□□□□□ -1.06
SAMSN1-203ENST00000400566 MIA2Q96PC5 1412 aa8.4□□□□□ -1.06
SAMSN1-203ENST00000400566 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.4□□□□□ -1.06
SAMSN1-203ENST00000400566 CDC42BPAQ5VT25 1732 aa8.4□□□□□ -1.06
SAMSN1-203ENST00000400566 NPM1P06748 294 aaKnown RBP eCLIP8.4□□□□□ -1.07
SAMSN1-203ENST00000400566 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.39□□□□□ -1.07
SAMSN1-203ENST00000400566 GPATCH8Q9UKJ3 1502 aaKnown RBP8.39□□□□□ -1.07
SAMSN1-203ENST00000400566 TTC37Q6PGP7 1564 aa8.38□□□□□ -1.07
SAMSN1-203ENST00000400566 TCOF1Q13428 1488 aaKnown RBP8.38□□□□□ -1.07
SAMSN1-203ENST00000400566 PREX2Q70Z35 1606 aa8.38□□□□□ -1.07
SAMSN1-203ENST00000400566 PTPN23Q9H3S7 1636 aa8.38□□□□□ -1.07
SAMSN1-203ENST00000400566 MYO5CQ9NQX4 1742 aa8.37□□□□□ -1.07
SAMSN1-203ENST00000400566 ABCA9Q8IUA7 1624 aa8.37□□□□□ -1.07
SAMSN1-203ENST00000400566 SPDYE1Q8NFV5 336 aaPredicted RBP8.37□□□□□ -1.07
SAMSN1-203ENST00000400566 CDC42BPBQ9Y5S2 1711 aa8.36□□□□□ -1.07
SAMSN1-203ENST00000400566 ARAP3Q8WWN8 1544 aa8.36□□□□□ -1.07
SAMSN1-203ENST00000400566 SPDYE4A6NLX3 237 aa8.36□□□□□ -1.07
SAMSN1-203ENST00000400566 KCNH8Q96L42 1107 aa8.35□□□□□ -1.07
SAMSN1-203ENST00000400566 DNAJC5Q9H3Z4 198 aa8.35□□□□□ -1.07
SAMSN1-203ENST00000400566 CFDP1Q9UEE9 299 aaPredicted RBP8.34□□□□□ -1.07
SAMSN1-203ENST00000400566 FAM50AQ14320 339 aaKnown RBP8.34□□□□□ -1.07
SAMSN1-203ENST00000400566 PLCH2O75038 1416 aa8.34□□□□□ -1.08
SAMSN1-203ENST00000400566 CAMSAP2Q08AD1 1489 aa8.33□□□□□ -1.08
SAMSN1-203ENST00000400566 GLI2P10070 1586 aa8.33□□□□□ -1.08
SAMSN1-203ENST00000400566 DNMT1P26358 1616 aaKnown RBP8.32□□□□□ -1.08
SAMSN1-203ENST00000400566 ARHGAP5Q13017 1502 aa8.32□□□□□ -1.08
SAMSN1-203ENST00000400566 SAMD9LQ8IVG5 1584 aa8.32□□□□□ -1.08
SAMSN1-203ENST00000400566 DIP2BQ9P265 1576 aa8.31□□□□□ -1.08
SAMSN1-203ENST00000400566 ZNF644Q9H582 1327 aaPredicted RBP8.31□□□□□ -1.08
SAMSN1-203ENST00000400566 SPDYE2BA6NHP3 402 aa8.31□□□□□ -1.08
SAMSN1-203ENST00000400566 SPDYE6P0CI01 402 aa8.31□□□□□ -1.08
SAMSN1-203ENST00000400566 SPDYE2Q495Y8 402 aa8.31□□□□□ -1.08
SAMSN1-203ENST00000400566 MAP3K4Q9Y6R4 1608 aa8.31□□□□□ -1.08
SAMSN1-203ENST00000400566 PLEKHH2Q8IVE3 1493 aa8.31□□□□□ -1.08
SAMSN1-203ENST00000400566 CLEC11AQ9Y240 323 aa8.3□□□□□ -1.08
SAMSN1-203ENST00000400566 KIAA1107Q9UPP5 1409 aa8.3□□□□□ -1.08
SAMSN1-203ENST00000400566 CROCC2H7BZ55 1655 aa8.3□□□□□ -1.08
SAMSN1-203ENST00000400566 EFCAB2Q5VUJ9 269 aa8.3□□□□□ -1.08
SAMSN1-203ENST00000400566 ARHGEF5Q12774 1597 aa8.3□□□□□ -1.08
SAMSN1-203ENST00000400566 DAPK1P53355 1430 aa8.29□□□□□ -1.08
SAMSN1-203ENST00000400566 PTPRKQ15262 1439 aa8.29□□□□□ -1.08
SAMSN1-203ENST00000400566 CD109Q6YHK3 1445 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms