RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 B4GALNT3Q6L9W6 998 aa15.56■□□□□ 0.08
CACNA1C-219ENST00000399649 GOLGA6L1Q8N7Z2 621 aa15.56■□□□□ 0.08
CACNA1C-219ENST00000399649 SRPK2P78362 688 aaKnown RBP15.55■□□□□ 0.08
CACNA1C-219ENST00000399649 MORC1Q86VD1 984 aa15.54■□□□□ 0.08
CACNA1C-219ENST00000399649 SYAP1Q96A49 352 aaPredicted RBP15.54■□□□□ 0.08
CACNA1C-219ENST00000399649 TNNT3P45378 269 aaPredicted RBP15.54■□□□□ 0.08
CACNA1C-219ENST00000399649 HSP90B1P14625 803 aaKnown RBP15.53■□□□□ 0.08
CACNA1C-219ENST00000399649 APBB1O00213 710 aa15.52■□□□□ 0.08
CACNA1C-219ENST00000399649 IPO8O15397 1037 aaKnown RBP15.52■□□□□ 0.07
CACNA1C-219ENST00000399649 DEKP35659 375 aaKnown RBP15.51■□□□□ 0.07
CACNA1C-219ENST00000399649 BAZ1BQ9UIG0 1483 aaKnown RBP15.51■□□□□ 0.07
CACNA1C-219ENST00000399649 PDE4CQ08493 712 aa15.51■□□□□ 0.07
CACNA1C-219ENST00000399649 CCDC34Q96HJ3 373 aa15.51■□□□□ 0.07
CACNA1C-219ENST00000399649 USP35Q9P2H5 1018 aa15.5■□□□□ 0.07
CACNA1C-219ENST00000399649 GPATCH3Q96I76 525 aa15.49■□□□□ 0.07
CACNA1C-219ENST00000399649 ARID3AQ99856 593 aa15.49■□□□□ 0.07
CACNA1C-219ENST00000399649 CALD1Q05682 793 aaKnown RBP15.48■□□□□ 0.07
CACNA1C-219ENST00000399649 CSPP1Q1MSJ5 1256 aa15.48■□□□□ 0.07
CACNA1C-219ENST00000399649 MLECQ14165 292 aa15.47■□□□□ 0.07
CACNA1C-219ENST00000399649 HDGFL2Q7Z4V5 671 aaPredicted RBP15.47■□□□□ 0.07
CACNA1C-219ENST00000399649 ZNF330Q9Y3S2 320 aaPredicted RBP15.47■□□□□ 0.07
CACNA1C-219ENST00000399649 CEP162Q5TB80 1403 aa15.47■□□□□ 0.07
CACNA1C-219ENST00000399649 GORABQ5T7V8 394 aa15.47■□□□□ 0.07
CACNA1C-219ENST00000399649 RASSF8Q8NHQ8 419 aa15.46■□□□□ 0.07
CACNA1C-219ENST00000399649 CEP89Q96ST8 783 aa15.46■□□□□ 0.07
CACNA1C-219ENST00000399649 DCAF11Q8TEB1 546 aa15.46■□□□□ 0.07
CACNA1C-219ENST00000399649 ITPRIPQ8IWB1 547 aa15.45■□□□□ 0.06
CACNA1C-219ENST00000399649 CSB-PGBD3P0DP91 1061 aa15.45■□□□□ 0.06
CACNA1C-219ENST00000399649 EEA1Q15075 1411 aa15.44■□□□□ 0.06
CACNA1C-219ENST00000399649 GZF1Q9H116 711 aaPredicted RBP15.44■□□□□ 0.06
CACNA1C-219ENST00000399649 TAF7LQ5H9L4 462 aa15.44■□□□□ 0.06
CACNA1C-219ENST00000399649 G3V3G9 751 aa15.44■□□□□ 0.06
CACNA1C-219ENST00000399649 DCAF8Q5TAQ9 597 aa15.44■□□□□ 0.06
CACNA1C-219ENST00000399649 RWDD1Q9H446 243 aaPredicted RBP15.44■□□□□ 0.06
CACNA1C-219ENST00000399649 SAFB2Q14151 953 aaKnown RBP eCLIP15.43■□□□□ 0.06
CACNA1C-219ENST00000399649 CREBRFQ8IUR6 639 aa15.43■□□□□ 0.06
CACNA1C-219ENST00000399649 SIN3AQ96ST3 1273 aa15.43■□□□□ 0.06
CACNA1C-219ENST00000399649 PAK3O75914 559 aaPredicted RBP15.43■□□□□ 0.06
CACNA1C-219ENST00000399649 CHMP3Q9Y3E7 222 aa15.43■□□□□ 0.06
CACNA1C-219ENST00000399649 CCNB3Q8WWL7 1395 aa15.42■□□□□ 0.06
CACNA1C-219ENST00000399649 EIF4G1Q04637 1599 aaKnown RBP15.42■□□□□ 0.06
CACNA1C-219ENST00000399649 KTN1Q86UP2 1357 aaKnown RBP15.42■□□□□ 0.06
CACNA1C-219ENST00000399649 TPM3P06753 285 aa15.41■□□□□ 0.06
CACNA1C-219ENST00000399649 SETQ01105 290 aaPredicted RBP15.4■□□□□ 0.06
CACNA1C-219ENST00000399649 CHMP4AQ9BY43 222 aa15.4■□□□□ 0.06
CACNA1C-219ENST00000399649 KIF27Q86VH2 1401 aa15.39■□□□□ 0.05
CACNA1C-219ENST00000399649 TRIM6-TRIM34B2RNG4 842 aa15.39■□□□□ 0.05
CACNA1C-219ENST00000399649 GOLGA6L3A6NEY3 463 aa15.39■□□□□ 0.05
CACNA1C-219ENST00000399649 PMFBP1Q8TBY8 1022 aa15.39■□□□□ 0.05
CACNA1C-219ENST00000399649 SPAG9O60271 1321 aaKnown RBP15.38■□□□□ 0.05
CACNA1C-219ENST00000399649 VPS53Q5VIR6 699 aa15.38■□□□□ 0.05
CACNA1C-219ENST00000399649 STK26Q9P289 416 aa15.38■□□□□ 0.05
CACNA1C-219ENST00000399649 MARCH6O60337 910 aa15.37■□□□□ 0.05
CACNA1C-219ENST00000399649 STK31Q9BXU1 1019 aa15.37■□□□□ 0.05
CACNA1C-219ENST00000399649 SLKQ9H2G2 1235 aaPredicted RBP15.37■□□□□ 0.05
CACNA1C-219ENST00000399649 PHF14O94880 888 aa15.37■□□□□ 0.05
CACNA1C-219ENST00000399649 MFAP1P55081 439 aaKnown RBP15.36■□□□□ 0.05
CACNA1C-219ENST00000399649 HDAC5Q9UQL6 1122 aa15.36■□□□□ 0.05
CACNA1C-219ENST00000399649 CCDC9Q9Y3X0 531 aaKnown RBP15.35■□□□□ 0.05
CACNA1C-219ENST00000399649 NACADO15069 1562 aa15.35■□□□□ 0.05
CACNA1C-219ENST00000399649 HMMRO75330 724 aa15.34■□□□□ 0.05
CACNA1C-219ENST00000399649 U2AF1L5P0DN76 240 aaPredicted RBP15.34■□□□□ 0.05
CACNA1C-219ENST00000399649 U2AF1Q01081 240 aaKnown RBP eCLIP15.34■□□□□ 0.05
CACNA1C-219ENST00000399649 WRNQ14191 1432 aaPredicted RBP eCLIP15.33■□□□□ 0.05
CACNA1C-219ENST00000399649 CCER2I3L3R5 266 aa15.33■□□□□ 0.04
CACNA1C-219ENST00000399649 TPD52L1Q16890 204 aaPredicted RBP15.33■□□□□ 0.04
CACNA1C-219ENST00000399649 CEP164Q9UPV0 1460 aa15.33■□□□□ 0.04
CACNA1C-219ENST00000399649 TCERG1O14776 1098 aaKnown RBP15.33■□□□□ 0.04
CACNA1C-219ENST00000399649 RCAN3Q9UKA8 241 aa15.32■□□□□ 0.04
CACNA1C-219ENST00000399649 KIF16BQ96L93 1317 aa15.32■□□□□ 0.04
CACNA1C-219ENST00000399649 TOMM22Q9NS69 142 aa15.32■□□□□ 0.04
CACNA1C-219ENST00000399649 TPM2P07951 284 aa15.31■□□□□ 0.04
CACNA1C-219ENST00000399649 NOL8Q76FK4 1167 aaKnown RBP15.31■□□□□ 0.04
CACNA1C-219ENST00000399649 PES1O00541 588 aaKnown RBP15.31■□□□□ 0.04
CACNA1C-219ENST00000399649 SF3A1Q15459 793 aaKnown RBP15.31■□□□□ 0.04
CACNA1C-219ENST00000399649 TSR1Q2NL82 804 aaKnown RBP15.31■□□□□ 0.04
CACNA1C-219ENST00000399649 KIF3AQ9Y496 699 aa15.31■□□□□ 0.04
CACNA1C-219ENST00000399649 RBM19Q9Y4C8 960 aaKnown RBP15.31■□□□□ 0.04
CACNA1C-219ENST00000399649 ANO8Q9HCE9 1232 aaPredicted RBP15.3■□□□□ 0.04
CACNA1C-219ENST00000399649 FRAT2O75474 233 aaPredicted RBP15.29■□□□□ 0.04
CACNA1C-219ENST00000399649 SMC4Q9NTJ3 1288 aa15.29■□□□□ 0.04
CACNA1C-219ENST00000399649 ROCK2O75116 1388 aaKnown RBP15.28■□□□□ 0.04
CACNA1C-219ENST00000399649 FOXD4L1Q9NU39 408 aa15.28■□□□□ 0.04
CACNA1C-219ENST00000399649 HSPA5P11021 654 aaKnown RBP15.28■□□□□ 0.04
CACNA1C-219ENST00000399649 KRI1Q8N9T8 703 aaKnown RBP15.28■□□□□ 0.04
CACNA1C-219ENST00000399649 EIF3AQ14152 1382 aaKnown RBP15.28■□□□□ 0.04
CACNA1C-219ENST00000399649 ST18O60284 1047 aa15.27■□□□□ 0.04
CACNA1C-219ENST00000399649 CCDC70Q6NSX1 233 aa15.27■□□□□ 0.04
CACNA1C-219ENST00000399649 SLC4A10Q6U841 1118 aa15.27■□□□□ 0.04
CACNA1C-219ENST00000399649 H3BQV1 296 aa15.27■□□□□ 0.03
CACNA1C-219ENST00000399649 RALBP1Q15311 655 aa15.27■□□□□ 0.03
CACNA1C-219ENST00000399649 IFFO2Q5TF58 517 aa15.27■□□□□ 0.03
CACNA1C-219ENST00000399649 FHAD1B1AJZ9 1412 aa15.26■□□□□ 0.03
CACNA1C-219ENST00000399649 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.26■□□□□ 0.03
CACNA1C-219ENST00000399649 GGT6Q6P531 493 aa15.25■□□□□ 0.03
CACNA1C-219ENST00000399649 TNIKQ9UKE5 1360 aa15.25■□□□□ 0.03
CACNA1C-219ENST00000399649 TPM1P09493 284 aa15.25■□□□□ 0.03
CACNA1C-219ENST00000399649 TCEAL9Q9UHQ7 104 aa15.23■□□□□ 0.03
CACNA1C-219ENST00000399649 AKAP17AQ02040 695 aaKnown RBP15.23■□□□□ 0.03
CACNA1C-219ENST00000399649 GPS2Q13227 327 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms