RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 GTF2E1P29083 439 aaPredicted RBP15.45■□□□□ 0.06
CACNA1C-213ENST00000399629 EVA1CP58658 441 aa15.45■□□□□ 0.06
CACNA1C-213ENST00000399629 NGDNQ8NEJ9 315 aaKnown RBP15.45■□□□□ 0.06
CACNA1C-213ENST00000399629 CUX2O14529 1486 aa15.44■□□□□ 0.06
CACNA1C-213ENST00000399629 GORABQ5T7V8 394 aa15.44■□□□□ 0.06
CACNA1C-213ENST00000399629 PLCB2Q00722 1185 aa15.44■□□□□ 0.06
CACNA1C-213ENST00000399629 MCCP23508 829 aa15.44■□□□□ 0.06
CACNA1C-213ENST00000399629 EFCAB2Q5VUJ9 269 aa15.44■□□□□ 0.06
CACNA1C-213ENST00000399629 HSP90AB1P08238 724 aaKnown RBP15.43■□□□□ 0.06
CACNA1C-213ENST00000399629 CEP164Q9UPV0 1460 aa15.43■□□□□ 0.06
CACNA1C-213ENST00000399629 CEP162Q5TB80 1403 aa15.42■□□□□ 0.06
CACNA1C-213ENST00000399629 GOLGA6L4A6NEF3 574 aa15.42■□□□□ 0.06
CACNA1C-213ENST00000399629 FHAD1B1AJZ9 1412 aa15.42■□□□□ 0.06
CACNA1C-213ENST00000399629 DNTTIP2Q5QJE6 756 aaKnown RBP15.41■□□□□ 0.06
CACNA1C-213ENST00000399629 CARMIL1Q5VZK9 1371 aa15.41■□□□□ 0.06
CACNA1C-213ENST00000399629 KLHL34Q8N239 644 aa15.4■□□□□ 0.06
CACNA1C-213ENST00000399629 DCAF1Q9Y4B6 1507 aa15.39■□□□□ 0.05
CACNA1C-213ENST00000399629 SPAG9O60271 1321 aaKnown RBP15.39■□□□□ 0.05
CACNA1C-213ENST00000399629 FRAT2O75474 233 aaPredicted RBP15.38■□□□□ 0.05
CACNA1C-213ENST00000399629 GLIPR1L2Q4G1C9 344 aa15.38■□□□□ 0.05
CACNA1C-213ENST00000399629 KRI1Q8N9T8 703 aaKnown RBP15.38■□□□□ 0.05
CACNA1C-213ENST00000399629 NRDCO43847 1150 aa15.37■□□□□ 0.05
CACNA1C-213ENST00000399629 CALD1Q05682 793 aaKnown RBP15.37■□□□□ 0.05
CACNA1C-213ENST00000399629 WASHC2CQ9Y4E1 1318 aa15.37■□□□□ 0.05
CACNA1C-213ENST00000399629 RGS3P49796 1198 aa15.37■□□□□ 0.05
CACNA1C-213ENST00000399629 KIF3BO15066 747 aa15.36■□□□□ 0.05
CACNA1C-213ENST00000399629 CHMP4AQ9BY43 222 aa15.36■□□□□ 0.05
CACNA1C-213ENST00000399629 NUTM2DQ5VT03 806 aaPredicted RBP15.36■□□□□ 0.05
CACNA1C-213ENST00000399629 CECR2Q9BXF3 1484 aa15.36■□□□□ 0.05
CACNA1C-213ENST00000399629 AMPHP49418 695 aa15.36■□□□□ 0.05
CACNA1C-213ENST00000399629 CYB5RLQ6IPT4 315 aa15.36■□□□□ 0.05
CACNA1C-213ENST00000399629 LTV1Q96GA3 475 aaPredicted RBP15.35■□□□□ 0.05
CACNA1C-213ENST00000399629 KIAA1211Q6ZU35 1233 aa15.35■□□□□ 0.05
CACNA1C-213ENST00000399629 APBB1O00213 710 aa15.35■□□□□ 0.05
CACNA1C-213ENST00000399629 KIAA2012Q0VF49 1180 aa15.34■□□□□ 0.05
CACNA1C-213ENST00000399629 NUTM2FA1L443 756 aa15.33■□□□□ 0.04
CACNA1C-213ENST00000399629 VPS53Q5VIR6 699 aa15.32■□□□□ 0.04
CACNA1C-213ENST00000399629 STK31Q9BXU1 1019 aa15.32■□□□□ 0.04
CACNA1C-213ENST00000399629 SOGA1O94964 1423 aa15.31■□□□□ 0.04
CACNA1C-213ENST00000399629 BAZ1AQ9NRL2 1556 aaPredicted RBP15.31■□□□□ 0.04
CACNA1C-213ENST00000399629 EIF3AQ14152 1382 aaKnown RBP15.31■□□□□ 0.04
CACNA1C-213ENST00000399629 GPATCH3Q96I76 525 aa15.31■□□□□ 0.04
CACNA1C-213ENST00000399629 PKD2Q13563 968 aa15.3■□□□□ 0.04
CACNA1C-213ENST00000399629 CFAP44Q96MT7 982 aa15.3■□□□□ 0.04
CACNA1C-213ENST00000399629 SIN3AQ96ST3 1273 aa15.29■□□□□ 0.04
CACNA1C-213ENST00000399629 IPO8O15397 1037 aaKnown RBP15.29■□□□□ 0.04
CACNA1C-213ENST00000399629 TERF2IPQ9NYB0 399 aa15.29■□□□□ 0.04
CACNA1C-213ENST00000399629 U2AF1L5P0DN76 240 aaPredicted RBP15.29■□□□□ 0.04
CACNA1C-213ENST00000399629 U2AF1Q01081 240 aaKnown RBP eCLIP15.29■□□□□ 0.04
CACNA1C-213ENST00000399629 CWC22Q9HCG8 908 aaKnown RBP15.29■□□□□ 0.04
CACNA1C-213ENST00000399629 CHAF1AQ13111 956 aaPredicted RBP15.28■□□□□ 0.04
CACNA1C-213ENST00000399629 L1TD1Q5T7N2 865 aaKnown RBP15.28■□□□□ 0.04
CACNA1C-213ENST00000399629 CTDP1Q9Y5B0 961 aaPredicted RBP15.28■□□□□ 0.04
CACNA1C-213ENST00000399629 TRIM34Q9BYJ4 488 aa15.28■□□□□ 0.04
CACNA1C-213ENST00000399629 ROCK2O75116 1388 aaKnown RBP15.28■□□□□ 0.04
CACNA1C-213ENST00000399629 ARHGAP35Q9NRY4 1499 aa15.27■□□□□ 0.04
CACNA1C-213ENST00000399629 MIER1Q8N108 512 aa15.27■□□□□ 0.03
CACNA1C-213ENST00000399629 HDAC5Q9UQL6 1122 aa15.27■□□□□ 0.03
CACNA1C-213ENST00000399629 HSCBQ8IWL3 235 aa15.26■□□□□ 0.03
CACNA1C-213ENST00000399629 OSCARQ8IYS5 282 aa15.25■□□□□ 0.03
CACNA1C-213ENST00000399629 MARCH6O60337 910 aa15.25■□□□□ 0.03
CACNA1C-213ENST00000399629 C1orf141Q5JVX7 400 aa15.25■□□□□ 0.03
CACNA1C-213ENST00000399629 HNRNPMP52272 730 aaKnown RBP eCLIP15.24■□□□□ 0.03
CACNA1C-213ENST00000399629 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.24■□□□□ 0.03
CACNA1C-213ENST00000399629 DRC7Q8IY82 874 aa15.24■□□□□ 0.03
CACNA1C-213ENST00000399629 ANKRD30AQ9BXX3 1397 aa15.24■□□□□ 0.03
CACNA1C-213ENST00000399629 HSP90B1P14625 803 aaKnown RBP15.24■□□□□ 0.03
CACNA1C-213ENST00000399629 FBXW7Q969H0 707 aa15.23■□□□□ 0.03
CACNA1C-213ENST00000399629 TOMM22Q9NS69 142 aa15.23■□□□□ 0.03
CACNA1C-213ENST00000399629 TDRD9Q8NDG6 1382 aaKnown RBP15.23■□□□□ 0.03
CACNA1C-213ENST00000399629 TNIKQ9UKE5 1360 aa15.23■□□□□ 0.03
CACNA1C-213ENST00000399629 RASSF8Q8NHQ8 419 aa15.23■□□□□ 0.03
CACNA1C-213ENST00000399629 SYTL4Q96C24 671 aaPredicted RBP15.23■□□□□ 0.03
CACNA1C-213ENST00000399629 KTN1Q86UP2 1357 aaKnown RBP15.23■□□□□ 0.03
CACNA1C-213ENST00000399629 NUP155O75694 1391 aa15.22■□□□□ 0.03
CACNA1C-213ENST00000399629 AMER1Q5JTC6 1135 aaPredicted RBP15.22■□□□□ 0.03
CACNA1C-213ENST00000399629 SUPT16HQ9Y5B9 1047 aaKnown RBP15.22■□□□□ 0.03
CACNA1C-213ENST00000399629 NOL10Q9BSC4 688 aaKnown RBP15.21■□□□□ 0.03
CACNA1C-213ENST00000399629 ITPRIPQ8IWB1 547 aa15.21■□□□□ 0.03
CACNA1C-213ENST00000399629 SMARCA2P51531 1590 aa15.2■□□□□ 0.02
CACNA1C-213ENST00000399629 SLC4A10Q6U841 1118 aa15.2■□□□□ 0.02
CACNA1C-213ENST00000399629 NOC3LQ8WTT2 800 aaKnown RBP15.2■□□□□ 0.02
CACNA1C-213ENST00000399629 TCEAL9Q9UHQ7 104 aa15.2■□□□□ 0.02
CACNA1C-213ENST00000399629 RAD21O60216 631 aa15.18■□□□□ 0.02
CACNA1C-213ENST00000399629 PDE4CQ08493 712 aa15.18■□□□□ 0.02
CACNA1C-213ENST00000399629 FOXD1Q16676 465 aa15.18■□□□□ 0.02
CACNA1C-213ENST00000399629 SF3B2Q13435 895 aaKnown RBP15.18■□□□□ 0.02
CACNA1C-213ENST00000399629 ATF3P18847 181 aa15.17■□□□□ 0.02
CACNA1C-213ENST00000399629 LMOD3Q0VAK6 560 aa15.17■□□□□ 0.02
CACNA1C-213ENST00000399629 CNKSR2Q8WXI2 1034 aa15.17■□□□□ 0.02
CACNA1C-213ENST00000399629 AMOTL1Q8IY63 956 aa15.17■□□□□ 0.02
CACNA1C-213ENST00000399629 HTATSF1O43719 755 aaKnown RBP15.17■□□□□ 0.02
CACNA1C-213ENST00000399629 TRIM6-TRIM34B2RNG4 842 aa15.16■□□□□ 0.02
CACNA1C-213ENST00000399629 TTC5Q8N0Z6 440 aa15.16■□□□□ 0.02
CACNA1C-213ENST00000399629 PSME1Q06323 249 aa15.16■□□□□ 0.02
CACNA1C-213ENST00000399629 FAM69CQ0P6D2 419 aa15.15■□□□□ 0.02
CACNA1C-213ENST00000399629 CCDC34Q96HJ3 373 aa15.14■□□□□ 0.02
CACNA1C-213ENST00000399629 HMMRO75330 724 aa15.14■□□□□ 0.01
CACNA1C-213ENST00000399629 SPRYD3Q8NCJ5 442 aa15.13■□□□□ 0.01
CACNA1C-213ENST00000399629 B4GALNT3Q6L9W6 998 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms