RNA–Protein interactions for RNA: ENST00000399609.7

SRL-201, Transcript of sarcalumenin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRL, Length 4,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRL-201ENST00000399609 CCDC18Q5T9S5 1454 aa11.72□□□□□ -0.53
SRL-201ENST00000399609 KIAA0586Q9BVV6 1533 aa11.72□□□□□ -0.53
SRL-201ENST00000399609 PLB1Q6P1J6 1458 aa11.71□□□□□ -0.54
SRL-201ENST00000399609 PPP6R1Q9UPN7 881 aa11.71□□□□□ -0.54
SRL-201ENST00000399609 NGDNQ8NEJ9 315 aaKnown RBP11.7□□□□□ -0.54
SRL-201ENST00000399609 TEX14Q8IWB6 1497 aa11.69□□□□□ -0.54
SRL-201ENST00000399609 SCAPERQ9BY12 1400 aa11.69□□□□□ -0.54
SRL-201ENST00000399609 SRPK2P78362 688 aaKnown RBP11.68□□□□□ -0.54
SRL-201ENST00000399609 EVA1CP58658 441 aa11.67□□□□□ -0.54
SRL-201ENST00000399609 ANKRD30AQ9BXX3 1397 aa11.67□□□□□ -0.54
SRL-201ENST00000399609 PPM1GO15355 546 aaPredicted RBP11.67□□□□□ -0.54
SRL-201ENST00000399609 TRIM26Q12899 539 aaPredicted RBP11.67□□□□□ -0.54
SRL-201ENST00000399609 KLHL34Q8N239 644 aa11.66□□□□□ -0.54
SRL-201ENST00000399609 CEP162Q5TB80 1403 aa11.66□□□□□ -0.54
SRL-201ENST00000399609 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.65□□□□□ -0.54
SRL-201ENST00000399609 CUX1P39880 1505 aa11.65□□□□□ -0.54
SRL-201ENST00000399609 PRDM2Q13029 1718 aa11.64□□□□□ -0.55
SRL-201ENST00000399609 NUP155O75694 1391 aa11.64□□□□□ -0.55
SRL-201ENST00000399609 ABCA10Q8WWZ4 1543 aa11.63□□□□□ -0.55
SRL-201ENST00000399609 AKNAQ7Z591 1439 aa11.63□□□□□ -0.55
SRL-201ENST00000399609 ARHGEF11O15085 1522 aa11.63□□□□□ -0.55
SRL-201ENST00000399609 MSH5O43196 834 aa11.63□□□□□ -0.55
SRL-201ENST00000399609 SLC26A8Q96RN1 970 aa11.63□□□□□ -0.55
SRL-201ENST00000399609 TONSLQ96HA7 1378 aa11.63□□□□□ -0.55
SRL-201ENST00000399609 ASXL2Q76L83 1435 aa11.63□□□□□ -0.55
SRL-201ENST00000399609 ACIN1Q9UKV3 1341 aaKnown RBP11.61□□□□□ -0.55
SRL-201ENST00000399609 WDR62O43379 1518 aa11.61□□□□□ -0.55
SRL-201ENST00000399609 ARHGAP5Q13017 1502 aa11.61□□□□□ -0.55
SRL-201ENST00000399609 PKD2Q13563 968 aa11.6□□□□□ -0.55
SRL-201ENST00000399609 PSME1Q06323 249 aa11.59□□□□□ -0.55
SRL-201ENST00000399609 VGFO15240 615 aaPredicted RBP11.59□□□□□ -0.55
SRL-201ENST00000399609 DENND4BO75064 1496 aaPredicted RBP11.58□□□□□ -0.55
SRL-201ENST00000399609 KIF21AQ7Z4S6 1674 aa11.58□□□□□ -0.56
SRL-201ENST00000399609 NGLY1Q96IV0 654 aa11.57□□□□□ -0.56
SRL-201ENST00000399609 DCAF11Q8TEB1 546 aa11.56□□□□□ -0.56
SRL-201ENST00000399609 LMTK3Q96Q04 1460 aa11.56□□□□□ -0.56
SRL-201ENST00000399609 DISP3Q9P2K9 1392 aa11.56□□□□□ -0.56
SRL-201ENST00000399609 PEG3Q9GZU2 1588 aa11.56□□□□□ -0.56
SRL-201ENST00000399609 RUSC2Q8N2Y8 1516 aa11.56□□□□□ -0.56
SRL-201ENST00000399609 ANP32EQ9BTT0 268 aa11.55□□□□□ -0.56
SRL-201ENST00000399609 ZNF644Q9H582 1327 aaPredicted RBP11.54□□□□□ -0.56
SRL-201ENST00000399609 ADAMTS2O95450 1211 aa11.54□□□□□ -0.56
SRL-201ENST00000399609 USP35Q9P2H5 1018 aa11.52□□□□□ -0.56
SRL-201ENST00000399609 ARHGAP35Q9NRY4 1499 aa11.52□□□□□ -0.56
SRL-201ENST00000399609 ESCO1Q5FWF5 840 aa11.52□□□□□ -0.56
SRL-201ENST00000399609 PODXL2Q9NZ53 605 aa11.52□□□□□ -0.56
SRL-201ENST00000399609 PPP1R1BQ9UD71 204 aaPredicted RBP11.51□□□□□ -0.57
SRL-201ENST00000399609 ADGRL1O94910 1474 aa11.5□□□□□ -0.57
SRL-201ENST00000399609 KANK4Q5T7N3 995 aaPredicted RBP11.5□□□□□ -0.57
SRL-201ENST00000399609 PHLDB1Q86UU1 1377 aa11.5□□□□□ -0.57
SRL-201ENST00000399609 RBM33Q96EV2 1170 aaKnown RBP11.5□□□□□ -0.57
SRL-201ENST00000399609 GTF3C3Q9Y5Q9 886 aa11.49□□□□□ -0.57
SRL-201ENST00000399609 CDCA8Q53HL2 280 aa11.49□□□□□ -0.57
SRL-201ENST00000399609 EIF4G3O43432 1585 aaKnown RBP11.49□□□□□ -0.57
SRL-201ENST00000399609 ERICH3Q5RHP9 1530 aa11.48□□□□□ -0.57
SRL-201ENST00000399609 HDGFL2Q7Z4V5 671 aaPredicted RBP11.47□□□□□ -0.57
SRL-201ENST00000399609 CARD11Q9BXL7 1154 aa11.47□□□□□ -0.57
SRL-201ENST00000399609 TRAK1Q9UPV9 953 aa11.47□□□□□ -0.57
SRL-201ENST00000399609 ZEB1P37275 1124 aaPredicted RBP11.47□□□□□ -0.57
SRL-201ENST00000399609 IQGAP2Q13576 1575 aa11.47□□□□□ -0.57
SRL-201ENST00000399609 NCKAP5LQ9HCH0 1330 aa11.47□□□□□ -0.57
SRL-201ENST00000399609 SYTL4Q96C24 671 aaPredicted RBP11.46□□□□□ -0.57
SRL-201ENST00000399609 FBXO31Q5XUX0 539 aaPredicted RBP11.46□□□□□ -0.57
SRL-201ENST00000399609 LTV1Q96GA3 475 aaPredicted RBP11.46□□□□□ -0.57
SRL-201ENST00000399609 SLC52A1Q9NWF4 448 aa11.46□□□□□ -0.57
SRL-201ENST00000399609 STRN4Q9NRL3 753 aa11.45□□□□□ -0.58
SRL-201ENST00000399609 FANCAO15360 1455 aa11.45□□□□□ -0.58
SRL-201ENST00000399609 ZNF330Q9Y3S2 320 aaPredicted RBP11.45□□□□□ -0.58
SRL-201ENST00000399609 KIF15Q9NS87 1388 aa11.45□□□□□ -0.58
SRL-201ENST00000399609 UHRF1BP1Q6BDS2 1440 aa11.44□□□□□ -0.58
SRL-201ENST00000399609 PDE3BQ13370 1112 aa11.44□□□□□ -0.58
SRL-201ENST00000399609 HIRIP3Q9BW71 556 aaPredicted RBP11.43□□□□□ -0.58
SRL-201ENST00000399609 CADPS2Q86UW7 1296 aa11.43□□□□□ -0.58
SRL-201ENST00000399609 TROQ12816 1431 aaPredicted RBP11.43□□□□□ -0.58
SRL-201ENST00000399609 TNNT2P45379 298 aaPredicted RBP11.43□□□□□ -0.58
SRL-201ENST00000399609 MINK1Q8N4C8 1332 aaPredicted RBP11.42□□□□□ -0.58
SRL-201ENST00000399609 WDR7Q9Y4E6 1490 aa11.42□□□□□ -0.58
SRL-201ENST00000399609 TOP2BQ02880 1626 aa11.42□□□□□ -0.58
SRL-201ENST00000399609 TMX4Q9H1E5 349 aaPredicted RBP11.42□□□□□ -0.58
SRL-201ENST00000399609 PLEKHH2Q8IVE3 1493 aa11.42□□□□□ -0.58
SRL-201ENST00000399609 AMPHP49418 695 aa11.41□□□□□ -0.58
SRL-201ENST00000399609 UBE2Q2Q8WVN8 375 aa11.41□□□□□ -0.58
SRL-201ENST00000399609 PRDM11Q9NQV5 511 aa11.41□□□□□ -0.58
SRL-201ENST00000399609 ARAP1Q96P48 1450 aa11.4□□□□□ -0.58
SRL-201ENST00000399609 C8orf37Q96NL8 207 aa11.4□□□□□ -0.58
SRL-201ENST00000399609 ZBTB47Q9UFB7 747 aaPredicted RBP11.4□□□□□ -0.58
SRL-201ENST00000399609 MSH6P52701 1360 aa11.4□□□□□ -0.58
SRL-201ENST00000399609 GPRASP1Q5JY77 1395 aa11.39□□□□□ -0.59
SRL-201ENST00000399609 VPS8Q8N3P4 1428 aa11.39□□□□□ -0.59
SRL-201ENST00000399609 XPCQ01831 940 aaPredicted RBP11.39□□□□□ -0.59
SRL-201ENST00000399609 ABCC2Q92887 1545 aa11.39□□□□□ -0.59
SRL-201ENST00000399609 CERKQ8TCT0 537 aa11.38□□□□□ -0.59
SRL-201ENST00000399609 NUTM2GQ5VZR2 741 aa11.37□□□□□ -0.59
SRL-201ENST00000399609 MYOM3Q5VTT5 1437 aa11.37□□□□□ -0.59
SRL-201ENST00000399609 TNRQ92752 1358 aa11.37□□□□□ -0.59
SRL-201ENST00000399609 CFAP53Q96M91 514 aa11.37□□□□□ -0.59
SRL-201ENST00000399609 NUP160Q12769 1436 aa11.36□□□□□ -0.59
SRL-201ENST00000399609 KNSTRNQ9Y448 316 aa11.36□□□□□ -0.59
SRL-201ENST00000399609 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.35□□□□□ -0.59
SRL-201ENST00000399609 NCBP3Q53F19 620 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms