RNA–Protein interactions for RNA: ENST00000399367.7

ITSN1-212, Transcript of intersectin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ITSN1, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-212ENST00000399367 EFCAB2Q5VUJ9 269 aa19.18■□□□□ 0.66
ITSN1-212ENST00000399367 TDRD9Q8NDG6 1382 aaKnown RBP19.17■□□□□ 0.66
ITSN1-212ENST00000399367 HSP90AB1P08238 724 aaKnown RBP19.16■□□□□ 0.66
ITSN1-212ENST00000399367 APBB1O00213 710 aa19.16■□□□□ 0.66
ITSN1-212ENST00000399367 SOGA1O94964 1423 aa19.15■□□□□ 0.66
ITSN1-212ENST00000399367 DNTTIP2Q5QJE6 756 aaKnown RBP19.15■□□□□ 0.66
ITSN1-212ENST00000399367 NUTM2DQ5VT03 806 aaPredicted RBP19.14■□□□□ 0.65
ITSN1-212ENST00000399367 KIF3BO15066 747 aa19.14■□□□□ 0.65
ITSN1-212ENST00000399367 PPP4R2Q9NY27 417 aa19.12■□□□□ 0.65
ITSN1-212ENST00000399367 U2AF1L5P0DN76 240 aaPredicted RBP19.12■□□□□ 0.65
ITSN1-212ENST00000399367 U2AF1Q01081 240 aaKnown RBP eCLIP19.12■□□□□ 0.65
ITSN1-212ENST00000399367 CLSTN1O94985 981 aa19.11■□□□□ 0.65
ITSN1-212ENST00000399367 B4GALNT3Q6L9W6 998 aa19.11■□□□□ 0.65
ITSN1-212ENST00000399367 HSPA5P11021 654 aaKnown RBP19.1■□□□□ 0.65
ITSN1-212ENST00000399367 PDS5BQ9NTI5 1447 aa19.1■□□□□ 0.65
ITSN1-212ENST00000399367 NUP155O75694 1391 aa19.09■□□□□ 0.65
ITSN1-212ENST00000399367 NCBP3Q53F19 620 aaKnown RBP19.09■□□□□ 0.65
ITSN1-212ENST00000399367 GOLGA6L4A6NEF3 574 aa19.08■□□□□ 0.64
ITSN1-212ENST00000399367 NUTM2FA1L443 756 aa19.07■□□□□ 0.64
ITSN1-212ENST00000399367 EID1Q9Y6B2 187 aa19.07■□□□□ 0.64
ITSN1-212ENST00000399367 ARHGAP35Q9NRY4 1499 aa19.07■□□□□ 0.64
ITSN1-212ENST00000399367 KANK4Q5T7N3 995 aaPredicted RBP19.06■□□□□ 0.64
ITSN1-212ENST00000399367 HNRNPMP52272 730 aaKnown RBP eCLIP19.06■□□□□ 0.64
ITSN1-212ENST00000399367 ROCK2O75116 1388 aaKnown RBP19.05■□□□□ 0.64
ITSN1-212ENST00000399367 RTN4Q9NQC3 1192 aaKnown RBP19.04■□□□□ 0.64
ITSN1-212ENST00000399367 NGDNQ8NEJ9 315 aaKnown RBP19.04■□□□□ 0.64
ITSN1-212ENST00000399367 WASHC2CQ9Y4E1 1318 aa19.04■□□□□ 0.64
ITSN1-212ENST00000399367 SETD5Q9C0A6 1442 aa19.03■□□□□ 0.64
ITSN1-212ENST00000399367 ERICH6BQ5W0A0 696 aa19.03■□□□□ 0.64
ITSN1-212ENST00000399367 TMX4Q9H1E5 349 aaPredicted RBP19.03■□□□□ 0.64
ITSN1-212ENST00000399367 KTN1Q86UP2 1357 aaKnown RBP19.03■□□□□ 0.64
ITSN1-212ENST00000399367 MCCP23508 829 aa19.03■□□□□ 0.64
ITSN1-212ENST00000399367 MPHOSPH9Q99550 1183 aa19.02■□□□□ 0.64
ITSN1-212ENST00000399367 SPRYD3Q8NCJ5 442 aa19.02■□□□□ 0.64
ITSN1-212ENST00000399367 IPO8O15397 1037 aaKnown RBP19.01■□□□□ 0.63
ITSN1-212ENST00000399367 CHMP3Q9Y3E7 222 aa19.01■□□□□ 0.63
ITSN1-212ENST00000399367 HSCBQ8IWL3 235 aa19■□□□□ 0.63
ITSN1-212ENST00000399367 LTV1Q96GA3 475 aaPredicted RBP19■□□□□ 0.63
ITSN1-212ENST00000399367 NOP58Q9Y2X3 529 aaKnown RBP19■□□□□ 0.63
ITSN1-212ENST00000399367 ANKRD30AQ9BXX3 1397 aa18.99■□□□□ 0.63
ITSN1-212ENST00000399367 GNL2Q13823 731 aaKnown RBP18.99■□□□□ 0.63
ITSN1-212ENST00000399367 SPAG9O60271 1321 aaKnown RBP18.99■□□□□ 0.63
ITSN1-212ENST00000399367 GOLGA6L6A8MZA4 724 aa18.98■□□□□ 0.63
ITSN1-212ENST00000399367 TIMELESSQ9UNS1 1208 aa18.98■□□□□ 0.63
ITSN1-212ENST00000399367 KIAA1211Q6ZU35 1233 aa18.97■□□□□ 0.63
ITSN1-212ENST00000399367 CALD1Q05682 793 aaKnown RBP18.97■□□□□ 0.63
ITSN1-212ENST00000399367 ITPRIPQ8IWB1 547 aa18.97■□□□□ 0.63
ITSN1-212ENST00000399367 GORABQ5T7V8 394 aa18.96■□□□□ 0.63
ITSN1-212ENST00000399367 STK31Q9BXU1 1019 aa18.96■□□□□ 0.63
ITSN1-212ENST00000399367 TERF2IPQ9NYB0 399 aa18.95■□□□□ 0.62
ITSN1-212ENST00000399367 TAF7LQ5H9L4 462 aa18.95■□□□□ 0.62
ITSN1-212ENST00000399367 AMPHP49418 695 aa18.95■□□□□ 0.62
ITSN1-212ENST00000399367 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.95■□□□□ 0.62
ITSN1-212ENST00000399367 NRDCO43847 1150 aa18.93■□□□□ 0.62
ITSN1-212ENST00000399367 CYB5RLQ6IPT4 315 aa18.93■□□□□ 0.62
ITSN1-212ENST00000399367 CCDC88BA6NC98 1476 aa18.93■□□□□ 0.62
ITSN1-212ENST00000399367 FMN1Q68DA7 1419 aa18.92■□□□□ 0.62
ITSN1-212ENST00000399367 G3V3G9 751 aa18.91■□□□□ 0.62
ITSN1-212ENST00000399367 DCAF8Q5TAQ9 597 aa18.91■□□□□ 0.62
ITSN1-212ENST00000399367 JPH4Q96JJ6 628 aa18.91■□□□□ 0.62
ITSN1-212ENST00000399367 NAP1L5Q96NT1 182 aaPredicted RBP18.91■□□□□ 0.62
ITSN1-212ENST00000399367 ABCC8Q09428 1581 aa18.91■□□□□ 0.62
ITSN1-212ENST00000399367 TRAK1Q9UPV9 953 aa18.91■□□□□ 0.62
ITSN1-212ENST00000399367 VPS8Q8N3P4 1428 aa18.9■□□□□ 0.62
ITSN1-212ENST00000399367 SLC4A10Q6U841 1118 aa18.9■□□□□ 0.62
ITSN1-212ENST00000399367 GTF2E1P29083 439 aaPredicted RBP18.9■□□□□ 0.62
ITSN1-212ENST00000399367 EIF3AQ14152 1382 aaKnown RBP18.9■□□□□ 0.62
ITSN1-212ENST00000399367 CCDC146Q8IYE0 955 aa18.87■□□□□ 0.61
ITSN1-212ENST00000399367 CHMP4AQ9BY43 222 aa18.86■□□□□ 0.61
ITSN1-212ENST00000399367 SMC4Q9NTJ3 1288 aa18.86■□□□□ 0.61
ITSN1-212ENST00000399367 RALBP1Q15311 655 aa18.86■□□□□ 0.61
ITSN1-212ENST00000399367 RAB3GAP2Q9H2M9 1393 aa18.86■□□□□ 0.61
ITSN1-212ENST00000399367 CFAP44Q96MT7 982 aa18.86■□□□□ 0.61
ITSN1-212ENST00000399367 CCER2I3L3R5 266 aa18.85■□□□□ 0.61
ITSN1-212ENST00000399367 RCAN3Q9UKA8 241 aa18.85■□□□□ 0.61
ITSN1-212ENST00000399367 DRC7Q8IY82 874 aa18.84■□□□□ 0.61
ITSN1-212ENST00000399367 RWDD1Q9H446 243 aaPredicted RBP18.84■□□□□ 0.61
ITSN1-212ENST00000399367 CLUAP1Q96AJ1 413 aa18.84■□□□□ 0.61
ITSN1-212ENST00000399367 RBM19Q9Y4C8 960 aaKnown RBP18.84■□□□□ 0.61
ITSN1-212ENST00000399367 MROH2BQ7Z745 1585 aa18.83■□□□□ 0.61
ITSN1-212ENST00000399367 FRAT2O75474 233 aaPredicted RBP18.83■□□□□ 0.61
ITSN1-212ENST00000399367 AMER1Q5JTC6 1135 aaPredicted RBP18.83■□□□□ 0.61
ITSN1-212ENST00000399367 L3MBTL2Q969R5 705 aa18.83■□□□□ 0.61
ITSN1-212ENST00000399367 SMARCA2P51531 1590 aa18.83■□□□□ 0.61
ITSN1-212ENST00000399367 TRIM6-TRIM34B2RNG4 842 aa18.83■□□□□ 0.6
ITSN1-212ENST00000399367 FHOD3Q2V2M9 1422 aa18.82■□□□□ 0.6
ITSN1-212ENST00000399367 RSPH4AQ5TD94 716 aa18.82■□□□□ 0.6
ITSN1-212ENST00000399367 DEKP35659 375 aaKnown RBP18.81■□□□□ 0.6
ITSN1-212ENST00000399367 EVA1CP58658 441 aa18.8■□□□□ 0.6
ITSN1-212ENST00000399367 GPATCH3Q96I76 525 aa18.79■□□□□ 0.6
ITSN1-212ENST00000399367 MSH5O43196 834 aa18.78■□□□□ 0.6
ITSN1-212ENST00000399367 HDAC5Q9UQL6 1122 aa18.78■□□□□ 0.6
ITSN1-212ENST00000399367 CADPSQ9ULU8 1353 aa18.77■□□□□ 0.6
ITSN1-212ENST00000399367 TOMM22Q9NS69 142 aa18.77■□□□□ 0.6
ITSN1-212ENST00000399367 HMMRO75330 724 aa18.77■□□□□ 0.6
ITSN1-212ENST00000399367 HSP90B1P14625 803 aaKnown RBP18.76■□□□□ 0.59
ITSN1-212ENST00000399367 RRP7AQ9Y3A4 280 aaKnown RBP18.75■□□□□ 0.59
ITSN1-212ENST00000399367 LMOD3Q0VAK6 560 aa18.75■□□□□ 0.59
ITSN1-212ENST00000399367 ELL2O00472 640 aaPredicted RBP18.74■□□□□ 0.59
ITSN1-212ENST00000399367 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms