RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 NUP153P49790 1475 aaKnown RBP16.42■□□□□ 0.22
ITSN1-211ENST00000399355 DISP1Q96F81 1524 aa16.41■□□□□ 0.22
ITSN1-211ENST00000399355 JPH4Q96JJ6 628 aa16.41■□□□□ 0.22
ITSN1-211ENST00000399355 MRC2Q9UBG0 1479 aa16.41■□□□□ 0.22
ITSN1-211ENST00000399355 EHBP1L1Q8N3D4 1523 aa16.41■□□□□ 0.22
ITSN1-211ENST00000399355 ADAMTS12P58397 1594 aa16.4■□□□□ 0.22
ITSN1-211ENST00000399355 EIF4G2P78344 907 aaKnown RBP eCLIP16.4■□□□□ 0.22
ITSN1-211ENST00000399355 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.4■□□□□ 0.221e-6■■■■□ 23.9
ITSN1-211ENST00000399355 PKD2Q13563 968 aa16.4■□□□□ 0.22
ITSN1-211ENST00000399355 RGL3Q3MIN7 710 aa16.39■□□□□ 0.21
ITSN1-211ENST00000399355 ABCC5O15440 1437 aa16.39■□□□□ 0.21
ITSN1-211ENST00000399355 WDR62O43379 1518 aa16.37■□□□□ 0.21
ITSN1-211ENST00000399355 SENP3Q9H4L4 574 aaPredicted RBP16.37■□□□□ 0.21
ITSN1-211ENST00000399355 MRS2Q9HD23 443 aa16.36■□□□□ 0.21
ITSN1-211ENST00000399355 DAPK1P53355 1430 aa16.36■□□□□ 0.21
ITSN1-211ENST00000399355 KIF14Q15058 1648 aa16.35■□□□□ 0.21
ITSN1-211ENST00000399355 KIF7Q2M1P5 1343 aa16.34■□□□□ 0.21
ITSN1-211ENST00000399355 EIF4G3O43432 1585 aaKnown RBP16.33■□□□□ 0.21
ITSN1-211ENST00000399355 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.33■□□□□ 0.21
ITSN1-211ENST00000399355 HECW1Q76N89 1606 aa16.33■□□□□ 0.2
ITSN1-211ENST00000399355 GRIN2AQ12879 1464 aa16.33■□□□□ 0.2
ITSN1-211ENST00000399355 ARHGEF11O15085 1522 aa16.32■□□□□ 0.2
ITSN1-211ENST00000399355 NEFLP07196 543 aa16.32■□□□□ 0.2
ITSN1-211ENST00000399355 ANKRD30BQ9BXX2 1392 aa16.3■□□□□ 0.2
ITSN1-211ENST00000399355 B4GALNT3Q6L9W6 998 aa16.3■□□□□ 0.2
ITSN1-211ENST00000399355 PRKRIP1Q9H875 184 aaPredicted RBP16.29■□□□□ 0.2
ITSN1-211ENST00000399355 TIMELESSQ9UNS1 1208 aa16.29■□□□□ 0.2
ITSN1-211ENST00000399355 KIAA0556O60303 1618 aa16.28■□□□□ 0.2
ITSN1-211ENST00000399355 CEP170Q5SW79 1584 aa16.28■□□□□ 0.2
ITSN1-211ENST00000399355 DCAF11Q8TEB1 546 aa16.27■□□□□ 0.2
ITSN1-211ENST00000399355 CCER2I3L3R5 266 aa16.26■□□□□ 0.19
ITSN1-211ENST00000399355 CDK11AQ9UQ88 783 aaPredicted RBP16.26■□□□□ 0.19
ITSN1-211ENST00000399355 KIAA0586Q9BVV6 1533 aa16.26■□□□□ 0.19
ITSN1-211ENST00000399355 CCDC7Q96M83 1385 aa16.26■□□□□ 0.19
ITSN1-211ENST00000399355 NUP155O75694 1391 aa16.25■□□□□ 0.19
ITSN1-211ENST00000399355 PLEKHD1A6NEE1 506 aa16.25■□□□□ 0.19
ITSN1-211ENST00000399355 CAMSAP2Q08AD1 1489 aa16.25■□□□□ 0.19
ITSN1-211ENST00000399355 TCOF1Q13428 1488 aaKnown RBP16.24■□□□□ 0.19
ITSN1-211ENST00000399355 GPATCH8Q9UKJ3 1502 aaKnown RBP16.23■□□□□ 0.19
ITSN1-211ENST00000399355 IFT140Q96RY7 1462 aa16.23■□□□□ 0.19
ITSN1-211ENST00000399355 ST20-MTHFSA0A0A6YYL1 179 aa16.23■□□□□ 0.19
ITSN1-211ENST00000399355 NBPF1Q3BBV0 1214 aa16.23■□□□□ 0.19
ITSN1-211ENST00000399355 RBM19Q9Y4C8 960 aaKnown RBP16.23■□□□□ 0.19
ITSN1-211ENST00000399355 RAPGEF6Q8TEU7 1601 aa16.22■□□□□ 0.19
ITSN1-211ENST00000399355 NCOA1Q15788 1441 aa16.21■□□□□ 0.19
ITSN1-211ENST00000399355 PZPP20742 1482 aa16.21■□□□□ 0.19
ITSN1-211ENST00000399355 CARD11Q9BXL7 1154 aa16.19■□□□□ 0.18
ITSN1-211ENST00000399355 TEX14Q8IWB6 1497 aa16.19■□□□□ 0.18
ITSN1-211ENST00000399355 GCC2Q8IWJ2 1684 aa16.19■□□□□ 0.18
ITSN1-211ENST00000399355 TROQ12816 1431 aaPredicted RBP16.18■□□□□ 0.18
ITSN1-211ENST00000399355 MIA2Q96PC5 1412 aa16.18■□□□□ 0.18
ITSN1-211ENST00000399355 RPRD2Q5VT52 1461 aaKnown RBP16.17■□□□□ 0.18
ITSN1-211ENST00000399355 USP47Q96K76 1375 aa16.17■□□□□ 0.18
ITSN1-211ENST00000399355 CNTLNQ9NXG0 1405 aa16.17■□□□□ 0.18
ITSN1-211ENST00000399355 AKNAQ7Z591 1439 aa16.16■□□□□ 0.18
ITSN1-211ENST00000399355 TSPY4P0CV99 314 aa16.16■□□□□ 0.18
ITSN1-211ENST00000399355 TSPY10P0CW01 314 aa16.16■□□□□ 0.18
ITSN1-211ENST00000399355 ATP10BO94823 1461 aa16.15■□□□□ 0.18
ITSN1-211ENST00000399355 ANKRD50Q9ULJ7 1429 aa16.15■□□□□ 0.18
ITSN1-211ENST00000399355 SKAP1Q86WV1 359 aa16.15■□□□□ 0.18
ITSN1-211ENST00000399355 ERCC6L2Q5T890 1561 aa16.14■□□□□ 0.17
ITSN1-211ENST00000399355 DNMT1P26358 1616 aaKnown RBP16.14■□□□□ 0.17
ITSN1-211ENST00000399355 BCORL1Q5H9F3 1711 aa16.13■□□□□ 0.17
ITSN1-211ENST00000399355 MSH5O43196 834 aa16.13■□□□□ 0.17
ITSN1-211ENST00000399355 CC2D1BQ5T0F9 858 aaKnown RBP16.12■□□□□ 0.17
ITSN1-211ENST00000399355 SYNJ2O15056 1496 aa16.11■□□□□ 0.17
ITSN1-211ENST00000399355 KIF15Q9NS87 1388 aa16.1■□□□□ 0.17
ITSN1-211ENST00000399355 MYT1LQ9UL68 1186 aa16.1■□□□□ 0.17
ITSN1-211ENST00000399355 C9orf84Q5VXU9 1444 aa16.09■□□□□ 0.17
ITSN1-211ENST00000399355 SPATA31E1Q6ZUB1 1445 aa16.09■□□□□ 0.17
ITSN1-211ENST00000399355 PTPRGP23470 1445 aa16.07■□□□□ 0.16
ITSN1-211ENST00000399355 ANKRD30AQ9BXX3 1397 aa16.07■□□□□ 0.16
ITSN1-211ENST00000399355 AFAP1Q8N556 730 aa16.07■□□□□ 0.16
ITSN1-211ENST00000399355 CARMIL2Q6F5E8 1435 aa16.06■□□□□ 0.16
ITSN1-211ENST00000399355 KIAA1107Q9UPP5 1409 aa16.06■□□□□ 0.16
ITSN1-211ENST00000399355 ROCK1Q13464 1354 aa16.05■□□□□ 0.16
ITSN1-211ENST00000399355 MAGI1Q96QZ7 1491 aaPredicted RBP16.05■□□□□ 0.16
ITSN1-211ENST00000399355 TMC1Q8TDI8 760 aa16.05■□□□□ 0.16
ITSN1-211ENST00000399355 DHX29Q7Z478 1369 aaKnown RBP16.05■□□□□ 0.16
ITSN1-211ENST00000399355 CDC42BPAQ5VT25 1732 aa16.03■□□□□ 0.16
ITSN1-211ENST00000399355 CDCA7LQ96GN5 454 aa16.03■□□□□ 0.16
ITSN1-211ENST00000399355 PLIN1O60240 522 aa16.01■□□□□ 0.15
ITSN1-211ENST00000399355 ROCK2O75116 1388 aaKnown RBP16.01■□□□□ 0.15
ITSN1-211ENST00000399355 NUP160Q12769 1436 aa15.99■□□□□ 0.15
ITSN1-211ENST00000399355 NUTM2DQ5VT03 806 aaPredicted RBP15.97■□□□□ 0.15
ITSN1-211ENST00000399355 PLEKHH2Q8IVE3 1493 aa15.97■□□□□ 0.15
ITSN1-211ENST00000399355 ABCC10Q5T3U5 1492 aa15.97■□□□□ 0.15
ITSN1-211ENST00000399355 SYCP2Q9BX26 1530 aa15.97■□□□□ 0.15
ITSN1-211ENST00000399355 PNISRQ8TF01 805 aaKnown RBP15.96■□□□□ 0.14
ITSN1-211ENST00000399355 ANP32EQ9BTT0 268 aa15.95■□□□□ 0.14
ITSN1-211ENST00000399355 ABCA8O94911 1581 aa15.94■□□□□ 0.14
ITSN1-211ENST00000399355 MBD5Q9P267 1494 aa15.94■□□□□ 0.14
ITSN1-211ENST00000399355 ZBED9Q6R2W3 1325 aa15.94■□□□□ 0.14
ITSN1-211ENST00000399355 DISP3Q9P2K9 1392 aa15.94■□□□□ 0.14
ITSN1-211ENST00000399355 ARHGAP5Q13017 1502 aa15.93■□□□□ 0.14
ITSN1-211ENST00000399355 TTC37Q6PGP7 1564 aa15.93■□□□□ 0.14
ITSN1-211ENST00000399355 SAMD9LQ8IVG5 1584 aa15.92■□□□□ 0.14
ITSN1-211ENST00000399355 PANK3Q9H999 370 aa15.92■□□□□ 0.14
ITSN1-211ENST00000399355 ARHGEF12Q9NZN5 1544 aa15.91■□□□□ 0.14
ITSN1-211ENST00000399355 PLA2R1Q13018 1463 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms