RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 WWC1Q8IX03 1113 aa6.37□□□□□ -1.39
TTC3-204ENST00000399017 R3HCC1Q9Y3T6 440 aaKnown RBP6.36□□□□□ -1.39
TTC3-204ENST00000399017 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.36□□□□□ -1.39
TTC3-204ENST00000399017 NACADO15069 1562 aa6.36□□□□□ -1.39
TTC3-204ENST00000399017 DNTTIP2Q5QJE6 756 aaKnown RBP6.35□□□□□ -1.39
TTC3-204ENST00000399017 TPM4P67936 248 aa6.35□□□□□ -1.39
TTC3-204ENST00000399017 HSP90B1P14625 803 aaKnown RBP6.35□□□□□ -1.39
TTC3-204ENST00000399017 SMC4Q9NTJ3 1288 aa6.35□□□□□ -1.39
TTC3-204ENST00000399017 KIAA1211Q6ZU35 1233 aa6.35□□□□□ -1.39
TTC3-204ENST00000399017 CARMIL2Q6F5E8 1435 aa6.34□□□□□ -1.39
TTC3-204ENST00000399017 CEP162Q5TB80 1403 aa6.34□□□□□ -1.39
TTC3-204ENST00000399017 KIF3AQ9Y496 699 aa6.34□□□□□ -1.39
TTC3-204ENST00000399017 A0A0U1RQG5 324 aaPredicted RBP6.34□□□□□ -1.4
TTC3-204ENST00000399017 MARCH6O60337 910 aa6.34□□□□□ -1.4
TTC3-204ENST00000399017 MLECQ14165 292 aa6.34□□□□□ -1.4
TTC3-204ENST00000399017 VPS53Q5VIR6 699 aa6.33□□□□□ -1.4
TTC3-204ENST00000399017 PTMAP06454 111 aaKnown RBP6.33□□□□□ -1.4
TTC3-204ENST00000399017 PPM1FP49593 454 aaPredicted RBP6.33□□□□□ -1.4
TTC3-204ENST00000399017 CFDP1Q9UEE9 299 aaPredicted RBP6.33□□□□□ -1.4
TTC3-204ENST00000399017 LAS1LQ9Y4W2 734 aaKnown RBP6.33□□□□□ -1.4
TTC3-204ENST00000399017 TRIM21P19474 475 aaKnown RBP6.33□□□□□ -1.4
TTC3-204ENST00000399017 HDGFL2Q7Z4V5 671 aaPredicted RBP6.32□□□□□ -1.4
TTC3-204ENST00000399017 CCDC43Q96MW1 224 aaKnown RBP6.32□□□□□ -1.4
TTC3-204ENST00000399017 HRCP23327 699 aa6.32□□□□□ -1.4
TTC3-204ENST00000399017 CCDC136Q96JN2 1154 aa6.31□□□□□ -1.4
TTC3-204ENST00000399017 ZNF330Q9Y3S2 320 aaPredicted RBP6.31□□□□□ -1.4
TTC3-204ENST00000399017 PAXIP1Q6ZW49 1069 aaPredicted RBP6.31□□□□□ -1.4
TTC3-204ENST00000399017 RASSF8Q8NHQ8 419 aa6.3□□□□□ -1.4
TTC3-204ENST00000399017 C16orf71Q8IYS4 520 aaPredicted RBP6.3□□□□□ -1.4
TTC3-204ENST00000399017 TPM2P07951 284 aa6.3□□□□□ -1.4
TTC3-204ENST00000399017 VSIG10Q8N0Z9 540 aa6.3□□□□□ -1.4
TTC3-204ENST00000399017 RDXP35241 583 aaKnown RBP6.3□□□□□ -1.4
TTC3-204ENST00000399017 TSR1Q2NL82 804 aaKnown RBP6.29□□□□□ -1.4
TTC3-204ENST00000399017 VPS37DQ86XT2 251 aa6.29□□□□□ -1.4
TTC3-204ENST00000399017 DNAI2Q9GZS0 605 aa6.29□□□□□ -1.4
TTC3-204ENST00000399017 TAOK2Q9UL54 1235 aa6.29□□□□□ -1.4
TTC3-204ENST00000399017 BAZ1BQ9UIG0 1483 aaKnown RBP6.29□□□□□ -1.4
TTC3-204ENST00000399017 CHMP3Q9Y3E7 222 aa6.29□□□□□ -1.4
TTC3-204ENST00000399017 SALL2Q9Y467 1007 aaPredicted RBP6.29□□□□□ -1.4
TTC3-204ENST00000399017 TMEM87AQ8NBN3 555 aa6.28□□□□□ -1.4
TTC3-204ENST00000399017 MIER1Q8N108 512 aa6.28□□□□□ -1.4
TTC3-204ENST00000399017 SPDYE4A6NLX3 237 aa6.28□□□□□ -1.4
TTC3-204ENST00000399017 PAF1Q8N7H5 531 aa6.28□□□□□ -1.4
TTC3-204ENST00000399017 PRDM2Q13029 1718 aa6.28□□□□□ -1.4
TTC3-204ENST00000399017 FAM9BQ8IZU0 186 aa6.27□□□□□ -1.4
TTC3-204ENST00000399017 IPO8O15397 1037 aaKnown RBP6.27□□□□□ -1.41
TTC3-204ENST00000399017 ATF3P18847 181 aa6.27□□□□□ -1.41
TTC3-204ENST00000399017 HNRNPUQ00839 825 aaKnown RBP eCLIP6.27□□□□□ -1.41
TTC3-204ENST00000399017 ODF2Q5BJF6 829 aa6.27□□□□□ -1.41
TTC3-204ENST00000399017 EIF3AQ14152 1382 aaKnown RBP6.27□□□□□ -1.41
TTC3-204ENST00000399017 AKAP17AQ02040 695 aaKnown RBP6.27□□□□□ -1.41
TTC3-204ENST00000399017 CSPP1Q1MSJ5 1256 aa6.27□□□□□ -1.41
TTC3-204ENST00000399017 IL27Q8NEV9 243 aa6.27□□□□□ -1.41
TTC3-204ENST00000399017 CHIC2Q9UKJ5 165 aa6.27□□□□□ -1.41
TTC3-204ENST00000399017 PDS5BQ9NTI5 1447 aa6.27□□□□□ -1.41
TTC3-204ENST00000399017 NGDNQ8NEJ9 315 aaKnown RBP6.27□□□□□ -1.41
TTC3-204ENST00000399017 ERICH6BQ5W0A0 696 aa6.27□□□□□ -1.41
TTC3-204ENST00000399017 RBM33Q96EV2 1170 aaKnown RBP6.27□□□□□ -1.41
TTC3-204ENST00000399017 GOLGA6L1Q8N7Z2 621 aa6.26□□□□□ -1.41
TTC3-204ENST00000399017 U2SURPO15042 1029 aaKnown RBP6.26□□□□□ -1.41
TTC3-204ENST00000399017 FHAD1B1AJZ9 1412 aa6.26□□□□□ -1.41
TTC3-204ENST00000399017 PTMSP20962 102 aa6.26□□□□□ -1.41
TTC3-204ENST00000399017 RGL3Q3MIN7 710 aa6.25□□□□□ -1.41
TTC3-204ENST00000399017 C1orf141Q5JVX7 400 aa6.25□□□□□ -1.41
TTC3-204ENST00000399017 STK31Q9BXU1 1019 aa6.25□□□□□ -1.41
TTC3-204ENST00000399017 DRC7Q8IY82 874 aa6.25□□□□□ -1.41
TTC3-204ENST00000399017 TMF1P82094 1093 aa6.25□□□□□ -1.41
TTC3-204ENST00000399017 CCDC47Q96A33 483 aaKnown RBP6.25□□□□□ -1.41
TTC3-204ENST00000399017 LMOD3Q0VAK6 560 aa6.24□□□□□ -1.41
TTC3-204ENST00000399017 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.24□□□□□ -1.411e-6■■■■■ 52.2
TTC3-204ENST00000399017 FBXO3Q9UK99 471 aa6.24□□□□□ -1.41
TTC3-204ENST00000399017 TERF2IPQ9NYB0 399 aa6.24□□□□□ -1.41
TTC3-204ENST00000399017 AMPHP49418 695 aa6.24□□□□□ -1.41
TTC3-204ENST00000399017 PLCB2Q00722 1185 aa6.24□□□□□ -1.41
TTC3-204ENST00000399017 CPLX2Q6PUV4 134 aaKnown RBP6.24□□□□□ -1.41
TTC3-204ENST00000399017 SYNE3Q6ZMZ3 975 aa6.24□□□□□ -1.41
TTC3-204ENST00000399017 SETD1BQ9UPS6 1966 aaKnown RBP6.24□□□□□ -1.41
TTC3-204ENST00000399017 DESP17661 470 aa6.23□□□□□ -1.41
TTC3-204ENST00000399017 NEXNQ0ZGT2 675 aa6.23□□□□□ -1.41
TTC3-204ENST00000399017 CCDC70Q6NSX1 233 aa6.23□□□□□ -1.41
TTC3-204ENST00000399017 SOX12O15370 315 aa6.23□□□□□ -1.41
TTC3-204ENST00000399017 HSP90AB1P08238 724 aaKnown RBP6.23□□□□□ -1.41
TTC3-204ENST00000399017 KIF27Q86VH2 1401 aa6.23□□□□□ -1.41
TTC3-204ENST00000399017 EIF4G1Q04637 1599 aaKnown RBP6.23□□□□□ -1.41
TTC3-204ENST00000399017 SYAP1Q96A49 352 aaPredicted RBP6.23□□□□□ -1.41
TTC3-204ENST00000399017 RSPH4AQ5TD94 716 aa6.23□□□□□ -1.41
TTC3-204ENST00000399017 GGT6Q6P531 493 aa6.23□□□□□ -1.41
TTC3-204ENST00000399017 EEA1Q15075 1411 aa6.22□□□□□ -1.41
TTC3-204ENST00000399017 SPRYD3Q8NCJ5 442 aa6.22□□□□□ -1.41
TTC3-204ENST00000399017 UACAQ9BZF9 1416 aa6.22□□□□□ -1.41
TTC3-204ENST00000399017 TTC5Q8N0Z6 440 aa6.22□□□□□ -1.41
TTC3-204ENST00000399017 TPM1P09493 284 aa6.22□□□□□ -1.41
TTC3-204ENST00000399017 NBR1Q14596 966 aa6.22□□□□□ -1.41
TTC3-204ENST00000399017 CARD11Q9BXL7 1154 aa6.22□□□□□ -1.41
TTC3-204ENST00000399017 HOOK1Q9UJC3 728 aaKnown RBP6.22□□□□□ -1.41
TTC3-204ENST00000399017 HMMRO75330 724 aa6.21□□□□□ -1.41
TTC3-204ENST00000399017 MRS2Q9HD23 443 aa6.21□□□□□ -1.41
TTC3-204ENST00000399017 TPM3P06753 285 aa6.21□□□□□ -1.41
TTC3-204ENST00000399017 STAC3Q96MF2 364 aa6.21□□□□□ -1.41
TTC3-204ENST00000399017 ERICH2A1L162 156 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms