RNA–Protein interactions for RNA: ENST00000398631.2

PCDHA12-201, Transcript of protocadherin alpha 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA12, Length 5,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-201ENST00000398631 HDGFL2Q7Z4V5 671 aaPredicted RBP20.88■□□□□ 0.93
PCDHA12-201ENST00000398631 FOXD1Q16676 465 aa20.86■□□□□ 0.93
PCDHA12-201ENST00000398631 MPHOSPH9Q99550 1183 aa20.85■□□□□ 0.93
PCDHA12-201ENST00000398631 CADPSQ9ULU8 1353 aa20.85■□□□□ 0.93
PCDHA12-201ENST00000398631 TRIM44Q96DX7 344 aaPredicted RBP20.85■□□□□ 0.93
PCDHA12-201ENST00000398631 CCER2I3L3R5 266 aa20.84■□□□□ 0.93
PCDHA12-201ENST00000398631 RTF1Q92541 710 aaKnown RBP20.81■□□□□ 0.92
PCDHA12-201ENST00000398631 KTN1Q86UP2 1357 aaKnown RBP20.81■□□□□ 0.92
PCDHA12-201ENST00000398631 KIF3BO15066 747 aa20.81■□□□□ 0.92
PCDHA12-201ENST00000398631 FGD1P98174 961 aa20.79■□□□□ 0.92
PCDHA12-201ENST00000398631 KCNJ4P48050 445 aa20.79■□□□□ 0.92
PCDHA12-201ENST00000398631 RSPH4AQ5TD94 716 aa20.79■□□□□ 0.92
PCDHA12-201ENST00000398631 RAB3GAP2Q9H2M9 1393 aa20.78■□□□□ 0.92
PCDHA12-201ENST00000398631 ROCK2O75116 1388 aaKnown RBP20.78■□□□□ 0.92
PCDHA12-201ENST00000398631 GOLGA2Q08379 1002 aa20.77■□□□□ 0.91
PCDHA12-201ENST00000398631 RAPGEF2Q9Y4G8 1499 aa20.75■□□□□ 0.91
PCDHA12-201ENST00000398631 TOP2AP11388 1531 aaKnown RBP20.75■□□□□ 0.91
PCDHA12-201ENST00000398631 B4GALNT3Q6L9W6 998 aa20.74■□□□□ 0.91
PCDHA12-201ENST00000398631 SPAG9O60271 1321 aaKnown RBP20.74■□□□□ 0.91
PCDHA12-201ENST00000398631 JPH4Q96JJ6 628 aa20.74■□□□□ 0.91
PCDHA12-201ENST00000398631 PTMAP06454 111 aaKnown RBP20.73■□□□□ 0.91
PCDHA12-201ENST00000398631 HNRNPMP52272 730 aaKnown RBP eCLIP20.73■□□□□ 0.91
PCDHA12-201ENST00000398631 PAK3O75914 559 aaPredicted RBP20.73■□□□□ 0.91
PCDHA12-201ENST00000398631 U2AF1L5P0DN76 240 aaPredicted RBP20.73■□□□□ 0.91
PCDHA12-201ENST00000398631 U2AF1Q01081 240 aaKnown RBP eCLIP20.73■□□□□ 0.91
PCDHA12-201ENST00000398631 TPRNQ4KMQ1 711 aa20.72■□□□□ 0.91
PCDHA12-201ENST00000398631 CALD1Q05682 793 aaKnown RBP20.71■□□□□ 0.91
PCDHA12-201ENST00000398631 RALBP1Q15311 655 aa20.71■□□□□ 0.91
PCDHA12-201ENST00000398631 IPO8O15397 1037 aaKnown RBP20.71■□□□□ 0.91
PCDHA12-201ENST00000398631 HSP90AB1P08238 724 aaKnown RBP20.71■□□□□ 0.91
PCDHA12-201ENST00000398631 FHOD3Q2V2M9 1422 aa20.71■□□□□ 0.91
PCDHA12-201ENST00000398631 EIF3AQ14152 1382 aaKnown RBP20.7■□□□□ 0.9
PCDHA12-201ENST00000398631 CCDC18Q5T9S5 1454 aa20.69■□□□□ 0.9
PCDHA12-201ENST00000398631 WASHC2CQ9Y4E1 1318 aa20.68■□□□□ 0.9
PCDHA12-201ENST00000398631 CSB-PGBD3P0DP91 1061 aa20.67■□□□□ 0.9
PCDHA12-201ENST00000398631 EID1Q9Y6B2 187 aa20.66■□□□□ 0.9
PCDHA12-201ENST00000398631 TAOK2Q9UL54 1235 aa20.66■□□□□ 0.9
PCDHA12-201ENST00000398631 NAP1L2Q9ULW6 460 aaPredicted RBP20.66■□□□□ 0.9
PCDHA12-201ENST00000398631 TERF2IPQ9NYB0 399 aa20.66■□□□□ 0.9
PCDHA12-201ENST00000398631 L3MBTL2Q969R5 705 aa20.65■□□□□ 0.9
PCDHA12-201ENST00000398631 CFAP44Q96MT7 982 aa20.65■□□□□ 0.9
PCDHA12-201ENST00000398631 CHMP4AQ9BY43 222 aa20.64■□□□□ 0.89
PCDHA12-201ENST00000398631 ATAD2BQ9ULI0 1458 aa20.64■□□□□ 0.89
PCDHA12-201ENST00000398631 MCCP23508 829 aa20.63■□□□□ 0.89
PCDHA12-201ENST00000398631 WIZO95785 1651 aa20.63■□□□□ 0.89
PCDHA12-201ENST00000398631 HSCBQ8IWL3 235 aa20.61■□□□□ 0.89
PCDHA12-201ENST00000398631 NOP58Q9Y2X3 529 aaKnown RBP20.59■□□□□ 0.89
PCDHA12-201ENST00000398631 TULP1O00294 542 aaPredicted RBP20.59■□□□□ 0.89
PCDHA12-201ENST00000398631 ERICH6BQ5W0A0 696 aa20.59■□□□□ 0.89
PCDHA12-201ENST00000398631 RCAN3Q9UKA8 241 aa20.58■□□□□ 0.89
PCDHA12-201ENST00000398631 GOLGA6L4A6NEF3 574 aa20.58■□□□□ 0.88
PCDHA12-201ENST00000398631 PLCB2Q00722 1185 aa20.57■□□□□ 0.88
PCDHA12-201ENST00000398631 DNTTIP2Q5QJE6 756 aaKnown RBP20.57■□□□□ 0.88
PCDHA12-201ENST00000398631 NGDNQ8NEJ9 315 aaKnown RBP20.57■□□□□ 0.88
PCDHA12-201ENST00000398631 APBB1O00213 710 aa20.55■□□□□ 0.88
PCDHA12-201ENST00000398631 STK31Q9BXU1 1019 aa20.55■□□□□ 0.88
PCDHA12-201ENST00000398631 NUTM2DQ5VT03 806 aaPredicted RBP20.54■□□□□ 0.88
PCDHA12-201ENST00000398631 ZNF330Q9Y3S2 320 aaPredicted RBP20.54■□□□□ 0.88
PCDHA12-201ENST00000398631 NLRP13Q86W25 1043 aa20.53■□□□□ 0.88
PCDHA12-201ENST00000398631 RWDD1Q9H446 243 aaPredicted RBP20.53■□□□□ 0.88
PCDHA12-201ENST00000398631 ITPRIPQ8IWB1 547 aa20.53■□□□□ 0.88
PCDHA12-201ENST00000398631 PTPRGP23470 1445 aa20.52■□□□□ 0.88
PCDHA12-201ENST00000398631 FANCD2Q9BXW9 1451 aa20.52■□□□□ 0.88
PCDHA12-201ENST00000398631 KIAA1211Q6ZU35 1233 aa20.52■□□□□ 0.88
PCDHA12-201ENST00000398631 GOLGA6L6A8MZA4 724 aa20.5■□□□□ 0.87
PCDHA12-201ENST00000398631 NRDCO43847 1150 aa20.5■□□□□ 0.87
PCDHA12-201ENST00000398631 TRAK1Q9UPV9 953 aa20.5■□□□□ 0.87
PCDHA12-201ENST00000398631 HDAC5Q9UQL6 1122 aa20.49■□□□□ 0.87
PCDHA12-201ENST00000398631 AMPHP49418 695 aa20.48■□□□□ 0.87
PCDHA12-201ENST00000398631 CCDC144AA2RUR9 1427 aa20.48■□□□□ 0.87
PCDHA12-201ENST00000398631 LMOD3Q0VAK6 560 aa20.47■□□□□ 0.87
PCDHA12-201ENST00000398631 SMC4Q9NTJ3 1288 aa20.47■□□□□ 0.87
PCDHA12-201ENST00000398631 CCDC9Q9Y3X0 531 aaKnown RBP20.46■□□□□ 0.87
PCDHA12-201ENST00000398631 ISY1Q9ULR0 285 aaKnown RBP20.44■□□□□ 0.86
PCDHA12-201ENST00000398631 NUTM2FA1L443 756 aa20.44■□□□□ 0.86
PCDHA12-201ENST00000398631 VGFO15240 615 aaPredicted RBP20.44■□□□□ 0.86
PCDHA12-201ENST00000398631 SMARCA4P51532 1647 aa20.44■□□□□ 0.86
PCDHA12-201ENST00000398631 PDE3BQ13370 1112 aa20.43■□□□□ 0.86
PCDHA12-201ENST00000398631 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.43■□□□□ 0.86
PCDHA12-201ENST00000398631 UACAQ9BZF9 1416 aa20.43■□□□□ 0.86
PCDHA12-201ENST00000398631 HMMRO75330 724 aa20.42■□□□□ 0.86
PCDHA12-201ENST00000398631 CYB5RLQ6IPT4 315 aa20.42■□□□□ 0.86
PCDHA12-201ENST00000398631 PMFBP1Q8TBY8 1022 aa20.42■□□□□ 0.86
PCDHA12-201ENST00000398631 ST20-MTHFSA0A0A6YYL1 179 aa20.42■□□□□ 0.86
PCDHA12-201ENST00000398631 PHLDB1Q86UU1 1377 aa20.42■□□□□ 0.86
PCDHA12-201ENST00000398631 OSCARQ8IYS5 282 aa20.41■□□□□ 0.86
PCDHA12-201ENST00000398631 CCDC146Q8IYE0 955 aa20.4■□□□□ 0.86
PCDHA12-201ENST00000398631 GORABQ5T7V8 394 aa20.4■□□□□ 0.86
PCDHA12-201ENST00000398631 LTV1Q96GA3 475 aaPredicted RBP20.4■□□□□ 0.86
PCDHA12-201ENST00000398631 SPRYD3Q8NCJ5 442 aa20.39■□□□□ 0.86
PCDHA12-201ENST00000398631 GNL2Q13823 731 aaKnown RBP20.39■□□□□ 0.85
PCDHA12-201ENST00000398631 TCERG1O14776 1098 aaKnown RBP20.38■□□□□ 0.85
PCDHA12-201ENST00000398631 CENPJQ9HC77 1338 aaPredicted RBP20.38■□□□□ 0.85
PCDHA12-201ENST00000398631 TMX4Q9H1E5 349 aaPredicted RBP20.38■□□□□ 0.85
PCDHA12-201ENST00000398631 TAF7LQ5H9L4 462 aa20.37■□□□□ 0.85
PCDHA12-201ENST00000398631 KIF15Q9NS87 1388 aa20.37■□□□□ 0.85
PCDHA12-201ENST00000398631 CHMP3Q9Y3E7 222 aa20.37■□□□□ 0.85
PCDHA12-201ENST00000398631 CLUAP1Q96AJ1 413 aa20.37■□□□□ 0.85
PCDHA12-201ENST00000398631 SLC4A10Q6U841 1118 aa20.36■□□□□ 0.85
PCDHA12-201ENST00000398631 GPATCH3Q96I76 525 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms