RNA–Protein interactions for RNA: ENST00000397766.3

PGBD4-201, Transcript of piggyBac transposable element derived 4, humanhuman

APPRIS P1 BASIC

Gene PGBD4, Length 6,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4-201ENST00000397766 RGS3P49796 1198 aa7.95□□□□□ -1.14
PGBD4-201ENST00000397766 HDGFL2Q7Z4V5 671 aaPredicted RBP7.95□□□□□ -1.14
PGBD4-201ENST00000397766 GOLGA6L4A6NEF3 574 aa7.95□□□□□ -1.14
PGBD4-201ENST00000397766 CHAF1AQ13111 956 aaPredicted RBP7.95□□□□□ -1.14
PGBD4-201ENST00000397766 DCAF11Q8TEB1 546 aa7.95□□□□□ -1.14
PGBD4-201ENST00000397766 OSCARQ8IYS5 282 aa7.94□□□□□ -1.14
PGBD4-201ENST00000397766 FOXD1Q16676 465 aa7.94□□□□□ -1.14
PGBD4-201ENST00000397766 RALBP1Q15311 655 aa7.94□□□□□ -1.14
PGBD4-201ENST00000397766 SIN3AQ96ST3 1273 aa7.94□□□□□ -1.14
PGBD4-201ENST00000397766 VPS8Q8N3P4 1428 aa7.94□□□□□ -1.14
PGBD4-201ENST00000397766 RTF1Q92541 710 aaKnown RBP7.93□□□□□ -1.14
PGBD4-201ENST00000397766 LMOD2Q6P5Q4 547 aa7.93□□□□□ -1.14
PGBD4-201ENST00000397766 FMN1Q68DA7 1419 aa7.93□□□□□ -1.14
PGBD4-201ENST00000397766 SRPK2P78362 688 aaKnown RBP7.93□□□□□ -1.14
PGBD4-201ENST00000397766 NAP1L5Q96NT1 182 aaPredicted RBP7.92□□□□□ -1.14
PGBD4-201ENST00000397766 HTATSF1O43719 755 aaKnown RBP7.91□□□□□ -1.14
PGBD4-201ENST00000397766 HDAC5Q9UQL6 1122 aa7.91□□□□□ -1.14
PGBD4-201ENST00000397766 ANKRD30AQ9BXX3 1397 aa7.91□□□□□ -1.14
PGBD4-201ENST00000397766 SMARCA2P51531 1590 aa7.91□□□□□ -1.14
PGBD4-201ENST00000397766 PHF23Q9BUL5 403 aaPredicted RBP7.91□□□□□ -1.14
PGBD4-201ENST00000397766 RWDD1Q9H446 243 aaPredicted RBP7.9□□□□□ -1.14
PGBD4-201ENST00000397766 HSPA5P11021 654 aaKnown RBP7.9□□□□□ -1.14
PGBD4-201ENST00000397766 PLCB2Q00722 1185 aa7.9□□□□□ -1.15
PGBD4-201ENST00000397766 MEX3CQ5U5Q3 659 aaKnown RBP7.89□□□□□ -1.15
PGBD4-201ENST00000397766 MSNP26038 577 aaKnown RBP7.89□□□□□ -1.15
PGBD4-201ENST00000397766 NAP1L2Q9ULW6 460 aaPredicted RBP7.89□□□□□ -1.15
PGBD4-201ENST00000397766 GBP4Q96PP9 640 aa7.89□□□□□ -1.15
PGBD4-201ENST00000397766 ROCK2O75116 1388 aaKnown RBP7.89□□□□□ -1.15
PGBD4-201ENST00000397766 KIAA1211Q6ZU35 1233 aa7.89□□□□□ -1.15
PGBD4-201ENST00000397766 CYB5RLQ6IPT4 315 aa7.88□□□□□ -1.15
PGBD4-201ENST00000397766 PMFBP1Q8TBY8 1022 aa7.88□□□□□ -1.15
PGBD4-201ENST00000397766 PKD2Q13563 968 aa7.88□□□□□ -1.15
PGBD4-201ENST00000397766 RSPH4AQ5TD94 716 aa7.88□□□□□ -1.15
PGBD4-201ENST00000397766 TPRNQ4KMQ1 711 aa7.87□□□□□ -1.15
PGBD4-201ENST00000397766 TCERG1O14776 1098 aaKnown RBP7.87□□□□□ -1.15
PGBD4-201ENST00000397766 GNL2Q13823 731 aaKnown RBP7.87□□□□□ -1.15
PGBD4-201ENST00000397766 EFCAB2Q5VUJ9 269 aa7.87□□□□□ -1.15
PGBD4-201ENST00000397766 SYAP1Q96A49 352 aaPredicted RBP7.87□□□□□ -1.15
PGBD4-201ENST00000397766 PHLDB1Q86UU1 1377 aa7.87□□□□□ -1.15
PGBD4-201ENST00000397766 GPATCH3Q96I76 525 aa7.86□□□□□ -1.15
PGBD4-201ENST00000397766 LMOD3Q0VAK6 560 aa7.86□□□□□ -1.15
PGBD4-201ENST00000397766 CCDC9Q9Y3X0 531 aaKnown RBP7.86□□□□□ -1.15
PGBD4-201ENST00000397766 KIAA2012Q0VF49 1180 aa7.86□□□□□ -1.15
PGBD4-201ENST00000397766 SOGA1O94964 1423 aa7.86□□□□□ -1.15
PGBD4-201ENST00000397766 TPM4P67936 248 aa7.86□□□□□ -1.15
PGBD4-201ENST00000397766 DRC7Q8IY82 874 aa7.86□□□□□ -1.15
PGBD4-201ENST00000397766 SPAG9O60271 1321 aaKnown RBP7.86□□□□□ -1.15
PGBD4-201ENST00000397766 CSPP1Q1MSJ5 1256 aa7.85□□□□□ -1.15
PGBD4-201ENST00000397766 B4GALNT3Q6L9W6 998 aa7.85□□□□□ -1.15
PGBD4-201ENST00000397766 CCDC34Q96HJ3 373 aa7.85□□□□□ -1.15
PGBD4-201ENST00000397766 TULP1O00294 542 aaPredicted RBP7.85□□□□□ -1.15
PGBD4-201ENST00000397766 HMMRO75330 724 aa7.85□□□□□ -1.15
PGBD4-201ENST00000397766 PDE3BQ13370 1112 aa7.85□□□□□ -1.15
PGBD4-201ENST00000397766 TERF2IPQ9NYB0 399 aa7.85□□□□□ -1.15
PGBD4-201ENST00000397766 RCAN3Q9UKA8 241 aa7.85□□□□□ -1.15
PGBD4-201ENST00000397766 NUP155O75694 1391 aa7.84□□□□□ -1.15
PGBD4-201ENST00000397766 STK31Q9BXU1 1019 aa7.84□□□□□ -1.15
PGBD4-201ENST00000397766 MPHOSPH9Q99550 1183 aa7.84□□□□□ -1.15
PGBD4-201ENST00000397766 CCDC18Q5T9S5 1454 aa7.84□□□□□ -1.16
PGBD4-201ENST00000397766 ITPRIPQ8IWB1 547 aa7.83□□□□□ -1.16
PGBD4-201ENST00000397766 CCDC88BA6NC98 1476 aa7.83□□□□□ -1.16
PGBD4-201ENST00000397766 TMX4Q9H1E5 349 aaPredicted RBP7.83□□□□□ -1.16
PGBD4-201ENST00000397766 U2AF1L5P0DN76 240 aaPredicted RBP7.83□□□□□ -1.16
PGBD4-201ENST00000397766 U2AF1Q01081 240 aaKnown RBP eCLIP7.83□□□□□ -1.16
PGBD4-201ENST00000397766 UACAQ9BZF9 1416 aa7.82□□□□□ -1.16
PGBD4-201ENST00000397766 SENP3-EIF4A1A0A087X0R7 540 aa7.82□□□□□ -1.16
PGBD4-201ENST00000397766 GGT6Q6P531 493 aa7.82□□□□□ -1.16
PGBD4-201ENST00000397766 RAB3GAP2Q9H2M9 1393 aa7.82□□□□□ -1.16
PGBD4-201ENST00000397766 CHMP4CQ96CF2 233 aa7.82□□□□□ -1.16
PGBD4-201ENST00000397766 RAPGEF2Q9Y4G8 1499 aa7.81□□□□□ -1.16
PGBD4-201ENST00000397766 CSB-PGBD3P0DP91 1061 aa7.81□□□□□ -1.16
PGBD4-201ENST00000397766 TAOK2Q9UL54 1235 aa7.81□□□□□ -1.16
PGBD4-201ENST00000397766 USP35Q9P2H5 1018 aa7.81□□□□□ -1.16
PGBD4-201ENST00000397766 TOP2AP11388 1531 aaKnown RBP7.81□□□□□ -1.16
PGBD4-201ENST00000397766 CLSTN1O94985 981 aa7.81□□□□□ -1.16
PGBD4-201ENST00000397766 EID1Q9Y6B2 187 aa7.81□□□□□ -1.16
PGBD4-201ENST00000397766 STK26Q9P289 416 aa7.8□□□□□ -1.16
PGBD4-201ENST00000397766 KIF15Q9NS87 1388 aa7.8□□□□□ -1.16
PGBD4-201ENST00000397766 SAFB2Q14151 953 aaKnown RBP eCLIP7.8□□□□□ -1.16
PGBD4-201ENST00000397766 NLRP13Q86W25 1043 aa7.79□□□□□ -1.16
PGBD4-201ENST00000397766 KIF3AQ9Y496 699 aa7.79□□□□□ -1.16
PGBD4-201ENST00000397766 SOX12O15370 315 aa7.79□□□□□ -1.16
PGBD4-201ENST00000397766 ISY1Q9ULR0 285 aaKnown RBP7.79□□□□□ -1.16
PGBD4-201ENST00000397766 CENPJQ9HC77 1338 aaPredicted RBP7.79□□□□□ -1.16
PGBD4-201ENST00000397766 ABCC8Q09428 1581 aa7.79□□□□□ -1.16
PGBD4-201ENST00000397766 GORABQ5T7V8 394 aa7.78□□□□□ -1.16
PGBD4-201ENST00000397766 SMC4Q9NTJ3 1288 aa7.78□□□□□ -1.16
PGBD4-201ENST00000397766 PAK3O75914 559 aaPredicted RBP7.78□□□□□ -1.16
PGBD4-201ENST00000397766 PHF14O94880 888 aa7.78□□□□□ -1.16
PGBD4-201ENST00000397766 RBM19Q9Y4C8 960 aaKnown RBP7.78□□□□□ -1.16
PGBD4-201ENST00000397766 DEKP35659 375 aaKnown RBP7.78□□□□□ -1.16
PGBD4-201ENST00000397766 KANK4Q5T7N3 995 aaPredicted RBP7.77□□□□□ -1.17
PGBD4-201ENST00000397766 GOLGA6L3A6NEY3 463 aa7.77□□□□□ -1.17
PGBD4-201ENST00000397766 HSP90B1P14625 803 aaKnown RBP7.77□□□□□ -1.17
PGBD4-201ENST00000397766 MYBBP1AQ9BQG0 1328 aaKnown RBP7.77□□□□□ -1.17
PGBD4-201ENST00000397766 TAF7LQ5H9L4 462 aa7.77□□□□□ -1.17
PGBD4-201ENST00000397766 MROH2BQ7Z745 1585 aa7.76□□□□□ -1.17
PGBD4-201ENST00000397766 SPRYD3Q8NCJ5 442 aa7.76□□□□□ -1.17
PGBD4-201ENST00000397766 ST18O60284 1047 aa7.76□□□□□ -1.17
PGBD4-201ENST00000397766 APBB1O00213 710 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms