RNA–Protein interactions for RNA: ENST00000397337.6

NEB-202, Transcript of nebulin, humanhuman

TSL 5

Gene NEB, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-202ENST00000397337 CCER1Q8TC90 406 aaPredicted RBP8.14□□□□□ -1.11
NEB-202ENST00000397337 PTPRKQ15262 1439 aa8.14□□□□□ -1.11
NEB-202ENST00000397337 ABCC2Q92887 1545 aa8.14□□□□□ -1.11
NEB-202ENST00000397337 SUPT6HQ7KZ85 1726 aaKnown RBP8.13□□□□□ -1.11
NEB-202ENST00000397337 RIMBP3CA6NJZ7 1639 aa8.13□□□□□ -1.11
NEB-202ENST00000397337 RIMBP3BA6NNM3 1639 aa8.13□□□□□ -1.11
NEB-202ENST00000397337 ZCCHC11Q5TAX3 1644 aaKnown RBP8.13□□□□□ -1.11
NEB-202ENST00000397337 RIMBP3Q9UFD9 1639 aa8.13□□□□□ -1.11
NEB-202ENST00000397337 CCDC18Q5T9S5 1454 aa8.13□□□□□ -1.11
NEB-202ENST00000397337 FGD6Q6ZV73 1430 aa8.13□□□□□ -1.11
NEB-202ENST00000397337 HNRNPMP52272 730 aaKnown RBP eCLIP8.12□□□□□ -1.11
NEB-202ENST00000397337 CFDP1Q9UEE9 299 aaPredicted RBP8.12□□□□□ -1.11
NEB-202ENST00000397337 RRBP1Q9P2E9 1410 aaKnown RBP8.12□□□□□ -1.11
NEB-202ENST00000397337 EHBP1L1Q8N3D4 1523 aa8.12□□□□□ -1.11
NEB-202ENST00000397337 CDK11AQ9UQ88 783 aaPredicted RBP8.12□□□□□ -1.11
NEB-202ENST00000397337 TROQ12816 1431 aaPredicted RBP8.11□□□□□ -1.11
NEB-202ENST00000397337 MYOM3Q5VTT5 1437 aa8.11□□□□□ -1.11
NEB-202ENST00000397337 SAMD1Q6SPF0 538 aaPredicted RBP8.11□□□□□ -1.11
NEB-202ENST00000397337 RTN4Q9NQC3 1192 aaKnown RBP8.11□□□□□ -1.11
NEB-202ENST00000397337 MAP3K1Q13233 1512 aa8.11□□□□□ -1.11
NEB-202ENST00000397337 TTC37Q6PGP7 1564 aa8.11□□□□□ -1.11
NEB-202ENST00000397337 PTPN23Q9H3S7 1636 aa8.09□□□□□ -1.11
NEB-202ENST00000397337 CDC42BPAQ5VT25 1732 aa8.09□□□□□ -1.11
NEB-202ENST00000397337 GPATCH8Q9UKJ3 1502 aaKnown RBP8.08□□□□□ -1.12
NEB-202ENST00000397337 HRCP23327 699 aa8.08□□□□□ -1.12
NEB-202ENST00000397337 ASXL2Q76L83 1435 aa8.08□□□□□ -1.12
NEB-202ENST00000397337 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.07□□□□□ -1.12
NEB-202ENST00000397337 NPM1P06748 294 aaKnown RBP eCLIP8.07□□□□□ -1.12
NEB-202ENST00000397337 RAB3GAP2Q9H2M9 1393 aa8.06□□□□□ -1.12
NEB-202ENST00000397337 CDC42BPBQ9Y5S2 1711 aa8.06□□□□□ -1.12
NEB-202ENST00000397337 TSPOAP1O95153 1857 aa8.06□□□□□ -1.12
NEB-202ENST00000397337 KDM5BQ9UGL1 1544 aa8.06□□□□□ -1.12
NEB-202ENST00000397337 KDM6BO15054 1643 aa8.06□□□□□ -1.12
NEB-202ENST00000397337 ZNF219Q9P2Y4 722 aaPredicted RBP8.06□□□□□ -1.12
NEB-202ENST00000397337 AFAP1Q8N556 730 aa8.05□□□□□ -1.12
NEB-202ENST00000397337 SPINK5Q9NQ38 1064 aaPredicted RBP8.05□□□□□ -1.12
NEB-202ENST00000397337 ABCC10Q5T3U5 1492 aa8.05□□□□□ -1.12
NEB-202ENST00000397337 CAMSAP2Q08AD1 1489 aa8.05□□□□□ -1.12
NEB-202ENST00000397337 ARHGAP5Q13017 1502 aa8.04□□□□□ -1.12
NEB-202ENST00000397337 MYT1LQ9UL68 1186 aa8.04□□□□□ -1.12
NEB-202ENST00000397337 FAM69CQ0P6D2 419 aa8.03□□□□□ -1.12
NEB-202ENST00000397337 WDR7Q9Y4E6 1490 aa8.03□□□□□ -1.12
NEB-202ENST00000397337 ABCC5O15440 1437 aa8.03□□□□□ -1.12
NEB-202ENST00000397337 TRIM52Q96A61 297 aa8.02□□□□□ -1.13
NEB-202ENST00000397337 SIN3AQ96ST3 1273 aa8.02□□□□□ -1.13
NEB-202ENST00000397337 SYCP2Q9BX26 1530 aa8.02□□□□□ -1.13
NEB-202ENST00000397337 ARHGEF12Q9NZN5 1544 aa8.02□□□□□ -1.13
NEB-202ENST00000397337 SAMD9LQ8IVG5 1584 aa8.02□□□□□ -1.13
NEB-202ENST00000397337 RAPGEF3O95398 923 aa8.02□□□□□ -1.13
NEB-202ENST00000397337 NEUROD1Q13562 356 aa8.02□□□□□ -1.13
NEB-202ENST00000397337 UHRF1BP1LA0JNW5 1464 aa8.02□□□□□ -1.13
NEB-202ENST00000397337 DAPK1P53355 1430 aa8.01□□□□□ -1.13
NEB-202ENST00000397337 MYO5CQ9NQX4 1742 aa8□□□□□ -1.13
NEB-202ENST00000397337 SETD5Q9C0A6 1442 aa8□□□□□ -1.13
NEB-202ENST00000397337 TRAPPC8Q9Y2L5 1435 aa8□□□□□ -1.13
NEB-202ENST00000397337 MKRN4PQ13434 485 aaPredicted RBP8□□□□□ -1.13
NEB-202ENST00000397337 DHX57Q6P158 1386 aaKnown RBP8□□□□□ -1.13
NEB-202ENST00000397337 NAIPQ13075 1403 aa7.99□□□□□ -1.13
NEB-202ENST00000397337 PREX2Q70Z35 1606 aa7.99□□□□□ -1.13
NEB-202ENST00000397337 TRHP20396 242 aaPredicted RBP7.99□□□□□ -1.13
NEB-202ENST00000397337 ITSN2Q9NZM3 1697 aa7.98□□□□□ -1.13
NEB-202ENST00000397337 MIA2Q96PC5 1412 aa7.98□□□□□ -1.13
NEB-202ENST00000397337 TCOF1Q13428 1488 aaKnown RBP7.98□□□□□ -1.13
NEB-202ENST00000397337 FANCAO15360 1455 aa7.97□□□□□ -1.13
NEB-202ENST00000397337 DNMT1P26358 1616 aaKnown RBP7.97□□□□□ -1.13
NEB-202ENST00000397337 CD109Q6YHK3 1445 aa7.97□□□□□ -1.13
NEB-202ENST00000397337 MBD5Q9P267 1494 aa7.97□□□□□ -1.13
NEB-202ENST00000397337 TSPY4P0CV99 314 aa7.97□□□□□ -1.13
NEB-202ENST00000397337 TSPY10P0CW01 314 aa7.97□□□□□ -1.13
NEB-202ENST00000397337 EFCAB2Q5VUJ9 269 aa7.97□□□□□ -1.13
NEB-202ENST00000397337 PLCH2O75038 1416 aa7.96□□□□□ -1.13
NEB-202ENST00000397337 RNF39Q9H2S5 420 aa7.96□□□□□ -1.14
NEB-202ENST00000397337 C9orf84Q5VXU9 1444 aa7.96□□□□□ -1.14
NEB-202ENST00000397337 CFAP65Q6ZU64 1925 aaKnown RBP7.96□□□□□ -1.14
NEB-202ENST00000397337 SCAPERQ9BY12 1400 aa7.95□□□□□ -1.14
NEB-202ENST00000397337 HFM1A2PYH4 1435 aa7.95□□□□□ -1.14
NEB-202ENST00000397337 NCOA1Q15788 1441 aa7.95□□□□□ -1.14
NEB-202ENST00000397337 ADGRL1O94910 1474 aa7.94□□□□□ -1.14
NEB-202ENST00000397337 MAPKBP1O60336 1514 aa7.93□□□□□ -1.14
NEB-202ENST00000397337 DNAJC5Q9H3Z4 198 aa7.93□□□□□ -1.14
NEB-202ENST00000397337 ABCA9Q8IUA7 1624 aa7.93□□□□□ -1.14
NEB-202ENST00000397337 KIF15Q9NS87 1388 aa7.93□□□□□ -1.14
NEB-202ENST00000397337 HIRIP3Q9BW71 556 aaPredicted RBP7.93□□□□□ -1.14
NEB-202ENST00000397337 AKNAQ7Z591 1439 aa7.93□□□□□ -1.14
NEB-202ENST00000397337 DENND4BO75064 1496 aaPredicted RBP7.92□□□□□ -1.14
NEB-202ENST00000397337 CROCC2H7BZ55 1655 aa7.92□□□□□ -1.14
NEB-202ENST00000397337 KIF13AQ9H1H9 1805 aa7.92□□□□□ -1.14
NEB-202ENST00000397337 SPAG9O60271 1321 aaKnown RBP7.92□□□□□ -1.14
NEB-202ENST00000397337 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.92□□□□□ -1.14
NEB-202ENST00000397337 CCDC141Q6ZP82 1450 aa7.92□□□□□ -1.14
NEB-202ENST00000397337 PLEKHH2Q8IVE3 1493 aa7.91□□□□□ -1.14
NEB-202ENST00000397337 ABCC1P33527 1531 aa7.91□□□□□ -1.14
NEB-202ENST00000397337 DIP2BQ9P265 1576 aa7.91□□□□□ -1.14
NEB-202ENST00000397337 ANKRD50Q9ULJ7 1429 aa7.91□□□□□ -1.14
NEB-202ENST00000397337 POLA2Q14181 598 aa7.91□□□□□ -1.14
NEB-202ENST00000397337 MPHOSPH9Q99550 1183 aa7.91□□□□□ -1.14
NEB-202ENST00000397337 COL17A1Q9UMD9 1497 aaPredicted RBP7.9□□□□□ -1.14
NEB-202ENST00000397337 ANKRD30AQ9BXX3 1397 aa7.9□□□□□ -1.14
NEB-202ENST00000397337 MLECQ14165 292 aa7.9□□□□□ -1.14
NEB-202ENST00000397337 NUP155O75694 1391 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms