RNA–Protein interactions for RNA: ENST00000397087.7

RAPGEF4-203, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-203ENST00000397087 NEURL4Q96JN8 1562 aa8.91□□□□□ -0.98
RAPGEF4-203ENST00000397087 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.91□□□□□ -0.98
RAPGEF4-203ENST00000397087 UNC13BO14795 1591 aa8.9□□□□□ -0.99
RAPGEF4-203ENST00000397087 LAMC1P11047 1609 aa8.89□□□□□ -0.99
RAPGEF4-203ENST00000397087 WDR7Q9Y4E6 1490 aa8.88□□□□□ -0.99
RAPGEF4-203ENST00000397087 MTUS2Q5JR59 1369 aa8.88□□□□□ -0.99
RAPGEF4-203ENST00000397087 TEX14Q8IWB6 1497 aa8.88□□□□□ -0.99
RAPGEF4-203ENST00000397087 ZNF316A6NFI3 1004 aaPredicted RBP8.88□□□□□ -0.99
RAPGEF4-203ENST00000397087 MYO5CQ9NQX4 1742 aa8.87□□□□□ -0.99
RAPGEF4-203ENST00000397087 ABCC2Q92887 1545 aa8.87□□□□□ -0.99
RAPGEF4-203ENST00000397087 DAPK1P53355 1430 aa8.87□□□□□ -0.99
RAPGEF4-203ENST00000397087 BCORL1Q5H9F3 1711 aa8.87□□□□□ -0.99
RAPGEF4-203ENST00000397087 PLEKHH2Q8IVE3 1493 aa8.86□□□□□ -0.99
RAPGEF4-203ENST00000397087 CDK13Q14004 1512 aaKnown RBP8.86□□□□□ -0.99
RAPGEF4-203ENST00000397087 CDC42BPBQ9Y5S2 1711 aa8.86□□□□□ -0.99
RAPGEF4-203ENST00000397087 MAGI2Q86UL8 1455 aa8.85□□□□□ -0.99
RAPGEF4-203ENST00000397087 CNKSR2Q8WXI2 1034 aa8.85□□□□□ -0.99
RAPGEF4-203ENST00000397087 CAMSAP2Q08AD1 1489 aa8.85□□□□□ -0.99
RAPGEF4-203ENST00000397087 ARHGEF12Q9NZN5 1544 aa8.85□□□□□ -0.99
RAPGEF4-203ENST00000397087 PTPRKQ15262 1439 aa8.84□□□□□ -0.99
RAPGEF4-203ENST00000397087 PTPRGP23470 1445 aa8.84□□□□□ -0.99
RAPGEF4-203ENST00000397087 GPATCH8Q9UKJ3 1502 aaKnown RBP8.84□□□□□ -0.99
RAPGEF4-203ENST00000397087 YTHDC1Q96MU7 727 aaKnown RBP8.84□□□□□ -0.99
RAPGEF4-203ENST00000397087 DENND4BO75064 1496 aaPredicted RBP8.83□□□□□ -1
RAPGEF4-203ENST00000397087 EIF2AK4Q9P2K8 1649 aaKnown RBP8.83□□□□□ -1
RAPGEF4-203ENST00000397087 MBD5Q9P267 1494 aa8.83□□□□□ -1
RAPGEF4-203ENST00000397087 IQGAP3Q86VI3 1631 aa8.82□□□□□ -1
RAPGEF4-203ENST00000397087 DEPDC5O75140 1603 aa8.82□□□□□ -1
RAPGEF4-203ENST00000397087 CFAP74Q9C0B2 1584 aa8.82□□□□□ -1
RAPGEF4-203ENST00000397087 KIAA1107Q9UPP5 1409 aa8.82□□□□□ -1
RAPGEF4-203ENST00000397087 ABCC5O15440 1437 aa8.81□□□□□ -1
RAPGEF4-203ENST00000397087 ZCCHC11Q5TAX3 1644 aaKnown RBP8.8□□□□□ -1
RAPGEF4-203ENST00000397087 ABCA9Q8IUA7 1624 aa8.8□□□□□ -1
RAPGEF4-203ENST00000397087 ATP10BO94823 1461 aa8.8□□□□□ -1
RAPGEF4-203ENST00000397087 SAMD9LQ8IVG5 1584 aa8.8□□□□□ -1
RAPGEF4-203ENST00000397087 DMRT2Q9Y5R5 561 aa8.79□□□□□ -1
RAPGEF4-203ENST00000397087 CDK11AQ9UQ88 783 aaPredicted RBP8.79□□□□□ -1
RAPGEF4-203ENST00000397087 ATP10AO60312 1499 aa8.79□□□□□ -1
RAPGEF4-203ENST00000397087 RPRD2Q5VT52 1461 aaKnown RBP8.79□□□□□ -1
RAPGEF4-203ENST00000397087 KDM6BO15054 1643 aa8.79□□□□□ -1
RAPGEF4-203ENST00000397087 DNAJC5BQ9UF47 199 aa8.78□□□□□ -1
RAPGEF4-203ENST00000397087 UHRF1BP1Q6BDS2 1440 aa8.77□□□□□ -1.01
RAPGEF4-203ENST00000397087 RSPH4AQ5TD94 716 aa8.76□□□□□ -1.01
RAPGEF4-203ENST00000397087 PZPP20742 1482 aa8.76□□□□□ -1.01
RAPGEF4-203ENST00000397087 HNRNPUL2Q1KMD3 747 aaKnown RBP8.75□□□□□ -1.01
RAPGEF4-203ENST00000397087 NCOA1Q15788 1441 aa8.75□□□□□ -1.01
RAPGEF4-203ENST00000397087 ABCC1P33527 1531 aa8.75□□□□□ -1.01
RAPGEF4-203ENST00000397087 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.75□□□□□ -1.01
RAPGEF4-203ENST00000397087 INO80Q9ULG1 1556 aaPredicted RBP8.75□□□□□ -1.01
RAPGEF4-203ENST00000397087 PLB1Q6P1J6 1458 aa8.75□□□□□ -1.01
RAPGEF4-203ENST00000397087 CCDC141Q6ZP82 1450 aa8.75□□□□□ -1.01
RAPGEF4-203ENST00000397087 KIAA1210Q9ULL0 1709 aa8.75□□□□□ -1.01
RAPGEF4-203ENST00000397087 VWDEQ8N2E2 1590 aa8.75□□□□□ -1.01
RAPGEF4-203ENST00000397087 RTEL1-TNFRSF6BF6WH68 1400 aa8.74□□□□□ -1.01
RAPGEF4-203ENST00000397087 DIEXFQ68CQ4 756 aaKnown RBP8.74□□□□□ -1.01
RAPGEF4-203ENST00000397087 SCAF1Q9H7N4 1312 aaKnown RBP8.74□□□□□ -1.01
RAPGEF4-203ENST00000397087 TTC37Q6PGP7 1564 aa8.74□□□□□ -1.01
RAPGEF4-203ENST00000397087 ERBINQ96RT1 1412 aa8.74□□□□□ -1.01
RAPGEF4-203ENST00000397087 NCBP3Q53F19 620 aaKnown RBP8.73□□□□□ -1.01
RAPGEF4-203ENST00000397087 DUOX2Q9NRD8 1548 aa8.73□□□□□ -1.01
RAPGEF4-203ENST00000397087 RNF17Q9BXT8 1623 aaKnown RBP8.73□□□□□ -1.01
RAPGEF4-203ENST00000397087 E9PCH4 1651 aa8.73□□□□□ -1.01
RAPGEF4-203ENST00000397087 FAM135AQ9P2D6 1515 aa8.72□□□□□ -1.01
RAPGEF4-203ENST00000397087 PRG4Q92954 1404 aaPredicted RBP8.72□□□□□ -1.01
RAPGEF4-203ENST00000397087 ZBTB22O15209 634 aa8.71□□□□□ -1.01
RAPGEF4-203ENST00000397087 HOXD11P31277 338 aaPredicted RBP8.71□□□□□ -1.01
RAPGEF4-203ENST00000397087 ANKRD30BQ9BXX2 1392 aa8.71□□□□□ -1.01
RAPGEF4-203ENST00000397087 CEP152O94986 1710 aa8.71□□□□□ -1.02
RAPGEF4-203ENST00000397087 PRDM15P57071 1507 aaPredicted RBP8.7□□□□□ -1.02
RAPGEF4-203ENST00000397087 ANKRD30AQ9BXX3 1397 aa8.7□□□□□ -1.02
RAPGEF4-203ENST00000397087 ARID4BQ4LE39 1312 aaPredicted RBP8.7□□□□□ -1.02
RAPGEF4-203ENST00000397087 RNF216Q9NWF9 866 aaPredicted RBP8.69□□□□□ -1.02
RAPGEF4-203ENST00000397087 KDM5CP41229 1560 aa8.69□□□□□ -1.02
RAPGEF4-203ENST00000397087 LMTK2Q8IWU2 1503 aa8.69□□□□□ -1.02
RAPGEF4-203ENST00000397087 JPH4Q96JJ6 628 aa8.69□□□□□ -1.02
RAPGEF4-203ENST00000397087 ZMYM4Q5VZL5 1548 aa8.69□□□□□ -1.02
RAPGEF4-203ENST00000397087 TET3O43151 1660 aa8.69□□□□□ -1.02
RAPGEF4-203ENST00000397087 RALGAPBQ86X10 1494 aa8.69□□□□□ -1.02
RAPGEF4-203ENST00000397087 PPP1R15AO75807 674 aaPredicted RBP8.69□□□□□ -1.02
RAPGEF4-203ENST00000397087 C9orf84Q5VXU9 1444 aa8.68□□□□□ -1.02
RAPGEF4-203ENST00000397087 TRPM1Q7Z4N2 1603 aa8.68□□□□□ -1.02
RAPGEF4-203ENST00000397087 PLCH2O75038 1416 aa8.68□□□□□ -1.02
RAPGEF4-203ENST00000397087 CHMP7Q8WUX9 453 aaPredicted RBP8.67□□□□□ -1.02
RAPGEF4-203ENST00000397087 CENPBP07199 599 aaPredicted RBP8.67□□□□□ -1.02
RAPGEF4-203ENST00000397087 SPATA31E1Q6ZUB1 1445 aa8.67□□□□□ -1.02
RAPGEF4-203ENST00000397087 IFT172Q9UG01 1749 aa8.67□□□□□ -1.02
RAPGEF4-203ENST00000397087 ITGAEP38570 1179 aa8.67□□□□□ -1.02
RAPGEF4-203ENST00000397087 ZC3H13Q5T200 1668 aaKnown RBP8.67□□□□□ -1.02
RAPGEF4-203ENST00000397087 GLI2P10070 1586 aa8.66□□□□□ -1.02
RAPGEF4-203ENST00000397087 ZFYVE16Q7Z3T8 1539 aa8.66□□□□□ -1.02
RAPGEF4-203ENST00000397087 SPHKAPQ2M3C7 1700 aa8.66□□□□□ -1.02
RAPGEF4-203ENST00000397087 CCER2I3L3R5 266 aa8.65□□□□□ -1.02
RAPGEF4-203ENST00000397087 SLC4A1APQ9BWU0 796 aaKnown RBP8.64□□□□□ -1.03
RAPGEF4-203ENST00000397087 ATP1B4Q9UN42 357 aaPredicted RBP8.64□□□□□ -1.03
RAPGEF4-203ENST00000397087 TRPM2O94759 1503 aa8.64□□□□□ -1.03
RAPGEF4-203ENST00000397087 INSRP06213 1382 aa8.63□□□□□ -1.03
RAPGEF4-203ENST00000397087 REREQ9P2R6 1566 aa8.63□□□□□ -1.03
RAPGEF4-203ENST00000397087 SYCP2Q9BX26 1530 aa8.63□□□□□ -1.03
RAPGEF4-203ENST00000397087 ANKRD50Q9ULJ7 1429 aa8.63□□□□□ -1.03
RAPGEF4-203ENST00000397087 MYO3AQ8NEV4 1616 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms