RNA–Protein interactions for RNA: ENST00000397000.5

PPARG-204, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

TSL 1 (best) BASIC

Gene PPARG, Length 1,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-204ENST00000397000 SOX12O15370 315 aa12.54□□□□□ -0.4
PPARG-204ENST00000397000 EMP3P54852 163 aa12.53□□□□□ -0.4
PPARG-204ENST00000397000 KRTAP3-3Q9BYR6 98 aa12.52□□□□□ -0.41
PPARG-204ENST00000397000 KRTAP3-2Q9BYR7 98 aa12.52□□□□□ -0.41
PPARG-204ENST00000397000 PHF8Q9UPP1 1060 aa12.52□□□□□ -0.41
PPARG-204ENST00000397000 SPNS2Q8IVW8 549 aa12.51□□□□□ -0.41
PPARG-204ENST00000397000 HS3ST6Q96QI5 342 aa12.51□□□□□ -0.41
PPARG-204ENST00000397000 G3V3G9 751 aa12.5□□□□□ -0.41
PPARG-204ENST00000397000 FBXO22Q8NEZ5 403 aa12.48□□□□□ -0.41
PPARG-204ENST00000397000 HOXB1P14653 301 aaPredicted RBP12.47□□□□□ -0.41
PPARG-204ENST00000397000 MMRN1Q13201 1228 aa12.47□□□□□ -0.41
PPARG-204ENST00000397000 FAM205CA6NFA0 338 aa12.45□□□□□ -0.42
PPARG-204ENST00000397000 BCL11BQ9C0K0 894 aaPredicted RBP12.44□□□□□ -0.42
PPARG-204ENST00000397000 PKD2Q13563 968 aa12.43□□□□□ -0.42
PPARG-204ENST00000397000 DOK7Q18PE1 504 aa12.42□□□□□ -0.42
PPARG-204ENST00000397000 MFRPQ9BY79 579 aa12.41□□□□□ -0.42
PPARG-204ENST00000397000 NLRP6P59044 892 aa12.37□□□□□ -0.43
PPARG-204ENST00000397000 RGL2O15211 777 aa12.36□□□□□ -0.43
PPARG-204ENST00000397000 GPR153Q6NV75 609 aa12.35□□□□□ -0.43
PPARG-204ENST00000397000 ZNF710Q8N1W2 664 aa12.35□□□□□ -0.43
PPARG-204ENST00000397000 STK24Q9Y6E0 443 aa12.35□□□□□ -0.43
PPARG-204ENST00000397000 SMARCA2P51531 1590 aa12.35□□□□□ -0.43
PPARG-204ENST00000397000 NCAPD3P42695 1498 aa12.34□□□□□ -0.43
PPARG-204ENST00000397000 SMARCA4P51532 1647 aa12.34□□□□□ -0.43
PPARG-204ENST00000397000 ECM2O94769 699 aaPredicted RBP12.34□□□□□ -0.43
PPARG-204ENST00000397000 ZSWIM6Q9HCJ5 1215 aa12.34□□□□□ -0.43
PPARG-204ENST00000397000 TAOK2Q9UL54 1235 aa12.33□□□□□ -0.44
PPARG-204ENST00000397000 BAZ1AQ9NRL2 1556 aaPredicted RBP12.32□□□□□ -0.44
PPARG-204ENST00000397000 KIF3CO14782 793 aa12.32□□□□□ -0.44
PPARG-204ENST00000397000 STK25O00506 426 aa12.31□□□□□ -0.44
PPARG-204ENST00000397000 ATAD2BQ9ULI0 1458 aa12.3□□□□□ -0.44
PPARG-204ENST00000397000 RIMBP2O15034 1052 aa12.3□□□□□ -0.44
PPARG-204ENST00000397000 HMGXB3Q12766 1538 aa12.3□□□□□ -0.44
PPARG-204ENST00000397000 ERBB3P21860 1342 aa12.27□□□□□ -0.45
PPARG-204ENST00000397000 VARS2Q5ST30 1063 aaKnown RBP12.25□□□□□ -0.45
PPARG-204ENST00000397000 PEG3Q9GZU2 1588 aa12.23□□□□□ -0.45
PPARG-204ENST00000397000 BAZ1BQ9UIG0 1483 aaKnown RBP12.23□□□□□ -0.45
PPARG-204ENST00000397000 C2orf72A6NCS6 295 aa12.21□□□□□ -0.45
PPARG-204ENST00000397000 ZNF687Q8N1G0 1237 aa12.21□□□□□ -0.45
PPARG-204ENST00000397000 ERCC6Q03468 1493 aa12.21□□□□□ -0.46
PPARG-204ENST00000397000 ARSIQ5FYB1 569 aa12.2□□□□□ -0.46
PPARG-204ENST00000397000 KHSRPQ92945 711 aaKnown RBP eCLIP12.19□□□□□ -0.467e-7■■□□□ 13.2
PPARG-204ENST00000397000 PPP1R37O75864 691 aa12.18□□□□□ -0.46
PPARG-204ENST00000397000 CUX2O14529 1486 aa12.15□□□□□ -0.46
PPARG-204ENST00000397000 MROH2BQ7Z745 1585 aa12.15□□□□□ -0.46
PPARG-204ENST00000397000 ZNF316A6NFI3 1004 aaPredicted RBP12.13□□□□□ -0.47
PPARG-204ENST00000397000 SLC34A2O95436 690 aa12.13□□□□□ -0.47
PPARG-204ENST00000397000 HS6ST3Q8IZP7 471 aa12.11□□□□□ -0.47
PPARG-204ENST00000397000 LAMC3Q9Y6N6 1575 aa12.1□□□□□ -0.47
PPARG-204ENST00000397000 KDM4FA0A1W2PPD8 638 aa12.06□□□□□ -0.48
PPARG-204ENST00000397000 NUDT7P0C024 238 aa12.06□□□□□ -0.48
PPARG-204ENST00000397000 POTEEQ6S8J3 1075 aa12.06□□□□□ -0.48
PPARG-204ENST00000397000 PCDHGA4Q9Y5G9 962 aa12.06□□□□□ -0.48
PPARG-204ENST00000397000 NESP48681 1621 aa12.06□□□□□ -0.48
PPARG-204ENST00000397000 RNF166Q96A37 237 aaPredicted RBP12.04□□□□□ -0.48
PPARG-204ENST00000397000 DNAJC5Q9H3Z4 198 aa12.04□□□□□ -0.48
PPARG-204ENST00000397000 TMC2Q8TDI7 906 aa12.03□□□□□ -0.48
PPARG-204ENST00000397000 PDS5BQ9NTI5 1447 aa12.03□□□□□ -0.48
PPARG-204ENST00000397000 WIZO95785 1651 aa12.02□□□□□ -0.49
PPARG-204ENST00000397000 NKX1-1Q15270 411 aaPredicted RBP12.01□□□□□ -0.49
PPARG-204ENST00000397000 LHX6Q9UPM6 363 aa12.01□□□□□ -0.49
PPARG-204ENST00000397000 LSM11P83369 360 aaKnown RBP eCLIP12□□□□□ -0.49
PPARG-204ENST00000397000 MYT1LQ9UL68 1186 aa12□□□□□ -0.49
PPARG-204ENST00000397000 KIF21AQ7Z4S6 1674 aa11.98□□□□□ -0.49
PPARG-204ENST00000397000 THOC2Q8NI27 1593 aaKnown RBP11.98□□□□□ -0.49
PPARG-204ENST00000397000 FOXK1P85037 733 aa11.98□□□□□ -0.49
PPARG-204ENST00000397000 CADPSQ9ULU8 1353 aa11.97□□□□□ -0.49
PPARG-204ENST00000397000 PTGER2P43116 358 aa11.97□□□□□ -0.49
PPARG-204ENST00000397000 PTCD2Q8WV60 388 aaKnown RBP11.97□□□□□ -0.49
PPARG-204ENST00000397000 PBX2P40425 430 aa11.96□□□□□ -0.49
PPARG-204ENST00000397000 GPHNQ9NQX3 736 aaPredicted RBP11.95□□□□□ -0.5
PPARG-204ENST00000397000 RSF1Q96T23 1441 aaPredicted RBP11.93□□□□□ -0.5
PPARG-204ENST00000397000 TOP2AP11388 1531 aaKnown RBP11.92□□□□□ -0.5
PPARG-204ENST00000397000 DSG2Q14126 1118 aa11.92□□□□□ -0.5
PPARG-204ENST00000397000 CHGAP10645 457 aaKnown RBP11.91□□□□□ -0.5
PPARG-204ENST00000397000 ANKRD13DQ6ZTN6 518 aa11.91□□□□□ -0.5
PPARG-204ENST00000397000 PLPP6Q8IY26 295 aa11.91□□□□□ -0.5
PPARG-204ENST00000397000 AXIN2Q9Y2T1 843 aa11.91□□□□□ -0.5
PPARG-204ENST00000397000 MRC2Q9UBG0 1479 aa11.89□□□□□ -0.51
PPARG-204ENST00000397000 CEP164Q9UPV0 1460 aa11.88□□□□□ -0.51
PPARG-204ENST00000397000 CRISPLD2Q9H0B8 497 aa11.87□□□□□ -0.51
PPARG-204ENST00000397000 WDR62O43379 1518 aa11.86□□□□□ -0.51
PPARG-204ENST00000397000 CFTRP13569 1480 aa11.85□□□□□ -0.51
PPARG-204ENST00000397000 FANCD2Q9BXW9 1451 aa11.84□□□□□ -0.51
PPARG-204ENST00000397000 PSDA5PKW4 1024 aaPredicted RBP11.84□□□□□ -0.51
PPARG-204ENST00000397000 PRDM2Q13029 1718 aa11.83□□□□□ -0.52
PPARG-204ENST00000397000 ARHGAP33O14559 1287 aa11.82□□□□□ -0.52
PPARG-204ENST00000397000 OXER1Q8TDS5 423 aa11.82□□□□□ -0.52
PPARG-204ENST00000397000 NCKAP5LQ9HCH0 1330 aa11.81□□□□□ -0.52
PPARG-204ENST00000397000 ADGRD1Q6QNK2 874 aa11.8□□□□□ -0.52
PPARG-204ENST00000397000 DMRTA1Q5VZB9 504 aa11.79□□□□□ -0.52
PPARG-204ENST00000397000 HRO43593 1189 aa11.78□□□□□ -0.52
PPARG-204ENST00000397000 GTPBP6O43824 516 aaPredicted RBP11.77□□□□□ -0.53
PPARG-204ENST00000397000 PSEN2P49810 448 aa11.77□□□□□ -0.53
PPARG-204ENST00000397000 TK2O00142 265 aa11.76□□□□□ -0.53
PPARG-204ENST00000397000 RYDENQ9NUL5 291 aaKnown RBP11.76□□□□□ -0.53
PPARG-204ENST00000397000 PPP1R15BQ5SWA1 713 aa11.74□□□□□ -0.53
PPARG-204ENST00000397000 CCDC88BA6NC98 1476 aa11.73□□□□□ -0.53
PPARG-204ENST00000397000 PPP4R3BQ5MIZ7 849 aa11.73□□□□□ -0.53
PPARG-204ENST00000397000 TBC1D12O60347 775 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms